prot_A-nodosum_M_contig1113.8.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1113.8.2
Unique Nameprot_A-nodosum_M_contig1113.8.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length88
Homology
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BLAST of mRNA_A-nodosum_M_contig1113.8.2 vs. uniprot
Match: D8LCT5_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCT5_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 4.970e-22
Identity = 46/82 (56.10%), Postives = 63/82 (76.83%), Query Frame = 0 
Query:    1 RKLPLSVHLKVWSSTFKSYGQSFEETFNWDRRRQEQTIKDNAAKSVEALKEIAKDVREATHNTPEDLEKSKKALRELLAEIH 82
            RKLPLSVH ++WSST+K Y +SF E+F W R+R+E+  K  A + +  L+ + K+ RE THN+PEDLEKSK+AL+EL+ EIH
Sbjct:   24 RKLPLSVHTEIWSSTWKWYRESFAESFAWSRKRKEEAKKREAHEKMNTLRGMVKEAREVTHNSPEDLEKSKEALKELMEEIH 105
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BLAST of mRNA_A-nodosum_M_contig1113.8.2 vs. uniprot
Match: A0A6H5JJF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJF4_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 1.030e-20
Identity = 46/82 (56.10%), Postives = 62/82 (75.61%), Query Frame = 0 
Query:    1 RKLPLSVHLKVWSSTFKSYGQSFEETFNWDRRRQEQTIKDNAAKSVEALKEIAKDVREATHNTPEDLEKSKKALRELLAEIH 82
            RKLPLSVH ++WSST+K Y  SF E+F W R+R+E+  K  A + +  L+ + K+ RE THN+PEDLEKSK+AL+EL+ EIH
Sbjct:   45 RKLPLSVHTEIWSSTWKWYRASFAESFAWSRKRKEEAKKREAHEKMSTLQGMVKEAREITHNSPEDLEKSKEALKELMEEIH 126
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1113.8.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCT5_ECTSI4.970e-2256.10Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JJF4_9PHAE1.030e-2056.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 39..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1113contigA-nodosum_M_contig1113:172103..173950 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1113.8.2mRNA_A-nodosum_M_contig1113.8.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1113 172103..174215 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1113.8.2 ID=prot_A-nodosum_M_contig1113.8.2|Name=mRNA_A-nodosum_M_contig1113.8.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=88bp
RKLPLSVHLKVWSSTFKSYGQSFEETFNWDRRRQEQTIKDNAAKSVEALK
EIAKDVREATHNTPEDLEKSKKALRELLAEIHVRHTR*
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