prot_A-nodosum_M_contig1112.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1112.4.1
Unique Nameprot_A-nodosum_M_contig1112.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length505
Homology
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BLAST of mRNA_A-nodosum_M_contig1112.4.1 vs. uniprot
Match: D7FRQ8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRQ8_ECTSI)

HSP 1 Score: 281 bits (719), Expect = 8.840e-85
Identity = 272/606 (44.88%), Postives = 313/606 (51.65%), Query Frame = 0 
Query:    2 ASELSELRAELWRTRDNLERMKSH-TPPSAGQSSHRLFNRRHH--------ADGNIVDRENAEPQ----RPNERDRVKDLKLDRCA----GGGVRSGPTS--------PPSG----------------------------GSSRSDQNNGRSGDGIAAGRGFSEEMAAEETLNSLALEGAAFKNWTEEASSIAVRLIEEVKTLRWERVTWTEREAATERA-----------ATELKERTXXXXXRLLAAEEDARRTKEALLRXXDGXXXXXXXXXRAEQDLRAARKRSEERWGRADGLEGRDTQVGRS------------------------------------LREELRREKEGADALQRRLDQARAASARHEVEKKEWHASRERLEELRRLWGKQLRKVEKKVRTMAKENKALQERVAEADKARECAEADARRSADELRRLTEQRDNLLLGATRAGH---LSASSPADALAELLAXXXXXXXXXXXXXXXXXXXXSSAHARGSVKGGAWGWADKYSDGAGGDSRAEDLEAELERARAEAKLARVAVKQERLRREGAAKEKDEAVRQLRRLMGAAKRAVSRKDARLRSSRMETEVVWNALTEAVR 504
            ASELSELRAELWRTRD+LER+KS  TPPSA  S  R F+RR H        A     +  N +      R +E+ +   L+    A    GGG+RS P          P SG                            GSSR    +  S    AA  G SEE+AAEETL +L LEGAAFKNWTEEASSIAVRLIEEVK LRWE+ +W ERE A E             A  L+ER       L  AE D RR +EAL R              A+QD+             A+GL                                              L E LRREKEGADALQRRLD ARAASARHE E+KEW +S                        M KEN AL+ RV EA++AR+ A+AD+    +ELRRLTEQRDNLLLGATR G    L ASSPA+ LAELLA XXXXXXX                             D    G G D    +LEA+LE+AR+EAKLARVA +QERLRRE AA+EK+EAVRQL RLMGAA+RAV R+D+RL+SSRMETEVVWNALTEAVR
Sbjct:    3 ASELSELRAELWRTRDDLERIKSRGTPPSADCSPRRHFDRRRHRASPSPTLAATTACEVRNKDRDYRRHRHSEQHKGDGLEAGGGARGDSGGGIRSXPXXXXXXXXXXPGSGADYDDEAPRGLGGTASSGSSHGGRQLKFGSSRGRVGSASSEGENAAKGGSSEEVAAEETLCNLELEGAAFKNWTEEASSIAVRLIEEVKMLRWEKASWAERERAAEXXXXXXXXXXXXQADHLEER-------LGLAEADGRRAQEALAR--------------AQQDVERXXXXXXXXXXXAEGLRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVEMLRREKEGADALQRRLDAARAASARHEKERKEWRSSXXXXXXXXXXXXXXXXXXXXXXXXMTKENAALRARVGEAERARDRADADSLGHREELRRLTEQRDNLLLGATRLGGRRGLVASSPAETLAELLAAXXXXXXX-----------------------------DATDVGPGADG---ELEAQLEQARSEAKLARVAAQQERLRREAAAREKEEAVRQLHRLMGAARRAVGRRDSRLKSSRMETEVVWNALTEAVR 555
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1112.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRQ8_ECTSI8.840e-8544.88Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 285..347
NoneNo IPR availableCOILSCoilCoilcoord: 243..277
NoneNo IPR availableCOILSCoilCoilcoord: 162..196
NoneNo IPR availableCOILSCoilCoilcoord: 425..454
NoneNo IPR availableCOILSCoilCoilcoord: 5..25
NoneNo IPR availableCOILSCoilCoilcoord: 208..228
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..113
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 200..251

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1112contigA-nodosum_M_contig1112:181789..183524 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1112.4.1mRNA_A-nodosum_M_contig1112.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1112 178898..184252 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1112.4.1 ID=prot_A-nodosum_M_contig1112.4.1|Name=mRNA_A-nodosum_M_contig1112.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=505bp
MASELSELRAELWRTRDNLERMKSHTPPSAGQSSHRLFNRRHHADGNIVD
RENAEPQRPNERDRVKDLKLDRCAGGGVRSGPTSPPSGGSSRSDQNNGRS
GDGIAAGRGFSEEMAAEETLNSLALEGAAFKNWTEEASSIAVRLIEEVKT
LRWERVTWTEREAATERAATELKERTEALERRLLAAEEDARRTKEALLRA
QDGEREQARATERAEQDLRAARKRSEERWGRADGLEGRDTQVGRSLREEL
RREKEGADALQRRLDQARAASARHEVEKKEWHASRERLEELRRLWGKQLR
KVEKKVRTMAKENKALQERVAEADKARECAEADARRSADELRRLTEQRDN
LLLGATRAGHLSASSPADALAELLAAAAAGVVAGAGGDDHAAARRSSAHA
RGSVKGGAWGWADKYSDGAGGDSRAEDLEAELERARAEAKLARVAVKQER
LRREGAAKEKDEAVRQLRRLMGAAKRAVSRKDARLRSSRMETEVVWNALT
EAVR*
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