prot_A-nodosum_M_contig1110.11.5 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1110.11.5
Unique Nameprot_A-nodosum_M_contig1110.11.5
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1018
Homology
BLAST of mRNA_A-nodosum_M_contig1110.11.5 vs. uniprot
Match: D7FMB4_ECTSI (RRM_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMB4_ECTSI)

HSP 1 Score: 745 bits (1924), Expect = 5.390e-255
Identity = 498/1006 (49.50%), Postives = 561/1006 (55.77%), Query Frame = 0
Query:   33 SSSMGLAAQSTPPATFCTQQSPHRVQSSTNLDLVDCVGSDLVLAMNNLDLGEQTRSSVTAMAATANGSLFHGGSGGADGYANSADRPPSPLSEGF-LPLAALAPPPARQPAWLTAQQQHARSQNEHFPARIYGSSRDGTSNQMGGDHSRGADSVSGSIHGVRGCAGEETLNPGEYFEYPQTNGTNGSGGS----SRISPGAVPPPGFGIGGGMGATPMDHGLPSRGISGNGGGXXXXXXXXXSLGGRRSRSGGSPGTTPHLDESWTAVLNAPAGAEMMEFLTEQASRALVLWNVEAIGEDELRLACEAHGPLYYLRAEHRRKRVVFLAYYDVRDAVNAHRSLGAELS-RHLMSDHGSRPPPAVHFSVELHAGFSYKEGSLLVHNIPSQATEAEVASVFQIYGDLRRVTRLSTPHQAHPATFSVEFCSIQASILRRPDSRVAAQELAVRNPWGHAITVEPAIRSERERALGRQLHATLNRWAAEATQPPAAFPDKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLVLSGRSSDSDSPPPKPEDYPRDFGRIMDSYTPMTSANXXXXXXXXXXXPSGSDAHSCLAMNAEGQSLAVQYVNMPLQHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGPXXXXXXXXXXXXXXXXXRLHLQHMHSGGDIHPPPPYGSPSPGAAGVGAYYDLPLGYHGERDDDRAPAAPVWAAAAVAAGLSLSPPSARGGPGGVRGSPPLRGMPGSMMACHGGAGSFKD-RSRQASLDEGRL---SGGSXXXXXXRSMRCNSDGGQMLV-------SAAPGCGGSGGDEFSLDLKKVSKGLDKRTTIMIRNIPNKYTQAMLLQEIDASYRGSYDFFYLPIDFKNKCNVGYAFINFMDYRRIVPFFREFNGQRWKNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLIFHSSGSERGRPEPFPASSKVFRGGAAPVGSGGGGGSLF----RERTMSGSSTVA 1017
            SSS+ +     PP  F  QQ+PHRVQSSTNLDLVDCVGSDL+LAMNNLD+GEQ      A A  AN    HG   G  G  +              LPLA      ARQP+WLTAQQQ AR QNEHFP+   GS     S + G                                                  SR SPGA+PPPGFG+            + S   S N   XXXXXXXXX             G  PHLDESWTAVLNAPAGAE+MEFLTE+ SRALVLWNVEAIGEDELR ACE HGPLYYLRAEHRRKRV+F+AYYDVRDAVNAHRSLGAELS  +LM +HG+RP PAVHFS+ELHAGFSYKEGS++ H++P+Q TEAEV SVFQ+YGDLRRV +    H AHP++FSVEFCSIQ       D+RVAAQEL VRNPWGH ITVEPA+RSE E+ALG++LHATLNRW AE+TQ    + D+                             S+V+SGRSSDSDSPPPKPE  P    R++++  P                        C                                                                                                                                                            GG+RGSPPLRGMPG      GG G +KD R+RQ SLDE RL   + G XXXXXXR++RCNSD    ++       SA P C G+GG EFSLDLKKVSKG+DKRTTIM+RNIPNKYTQ MLLQEID+SYRG+YDFFYLPIDFKNKCNVGYAFINFMDYRRIVPFFREFN QRWKNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLIFHS+G ERGRPEPFPASSK +R   AP   GGGGG +F    RER++S SS ++
Sbjct:   24 SSSVSVMVSQRPPPVFAAQQTPHRVQSSTNLDLVDCVGSDLLLAMNNLDVGEQQ---ARACANLANNGCHHGLLEGGPGAGSPXXXXXXXXXXXXXLPLAXXXXXXARQPSWLTAQQQQARVQNEHFPSSSRGSLYGCDSGEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGSPGALPPPGFGL-------DSCSSVGSWNGSTNSXXXXXXXXXXXXXXXXXXXXXXXXGGNPHLDESWTAVLNAPAGAELMEFLTERPSRALVLWNVEAIGEDELRAACEGHGPLYYLRAEHRRKRVIFVAYYDVRDAVNAHRSLGAELSSNYLMDEHGARPRPAVHFSIELHAGFSYKEGSVVAHDLPAQVTEAEVGSVFQVYGDLRRVAQ----HHAHPSSFSVEFCSIQ-------DARVAAQELTVRNPWGHGITVEPAVRSEAEKALGKKLHATLNRWTAESTQ---VYEDR-----------------------MRSSSSSIVMSGRSSDSDSPPPKPERTPT---RMVEASRP-----------------------EC------------------------------------------------------------------------------------------------------------------------------------------------------------GGMRGSPPLRGMPGGCAGA-GGLG-YKDVRTRQMSLDEARLQHGNSGXXXXXXXRTVRCNSDSSSQILMAASSPHSAGPECSGNGGHEFSLDLKKVSKGMDKRTTIMVRNIPNKYTQMMLLQEIDSSYRGAYDFFYLPIDFKNKCNVGYAFINFMDYRRIVPFFREFNAQRWKNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLIFHSTGPERGRPEPFPASSKAYRAVLAP---GGGGGGVFGVRDRERSVSNSSALS 795          
BLAST of mRNA_A-nodosum_M_contig1110.11.5 vs. uniprot
Match: A0A836C7Y7_9STRA (RNA recognition motif 2-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Y7_9STRA)

HSP 1 Score: 254 bits (650), Expect = 2.770e-75
Identity = 120/155 (77.42%), Postives = 139/155 (89.68%), Query Frame = 0
Query:  835 GGSGGDEFSLDLKKVSKGLDKRTTIMIRNIPNKYTQAMLLQEIDASYRGSYDFFYLPIDFKNKCNVGYAFINFMDYRRIVPFFREFNGQRWKNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLIFHSSGSERGRPEPFPASSKVFR 989
            GG    EF+LD+ K++KGLDKRTTIMIRNIPNKYTQAMLLQEI+ ++  ++DFFYLPIDFKN+CNVGYAFINF+D+RRI+ F REF+GQRW+NFNSEKVCAISYARIQGKASMI RFQNSSLMEKDGEYRPL+F+SSG +RGRPEPFP  +K  R
Sbjct:    2 GGPSEAEFALDIGKIAKGLDKRTTIMIRNIPNKYTQAMLLQEINVNFLEAFDFFYLPIDFKNRCNVGYAFINFIDFRRIIAFTREFHGQRWRNFNSEKVCAISYARIQGKASMICRFQNSSLMEKDGEYRPLLFYSSGPDRGRPEPFPLGTKQRR 156          
BLAST of mRNA_A-nodosum_M_contig1110.11.5 vs. uniprot
Match: A0A836CK27_9STRA (RNA recognition motif 2-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK27_9STRA)

HSP 1 Score: 233 bits (594), Expect = 3.590e-68
Identity = 109/125 (87.20%), Postives = 120/125 (96.00%), Query Frame = 0
Query:  844 LDLKKVSKGLDKRTTIMIRNIPNKYTQAMLLQEIDASYRGSYDFFYLPIDFKNKCNVGYAFINFMDYRRIVPFFREFNGQRWKNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLIF 968
            LD KK++KG D+RTTIMIRNIPNKYTQAMLLQEIDA++RG YDFFYLPIDFKN+CNVGYAFINF+D+RRIV F REF+GQRW+NFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPL+F
Sbjct:    1 LDTKKIAKGQDRRTTIMIRNIPNKYTQAMLLQEIDANFRGGYDFFYLPIDFKNRCNVGYAFINFIDFRRIVSFTREFHGQRWRNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLLF 125          
BLAST of mRNA_A-nodosum_M_contig1110.11.5 vs. uniprot
Match: A0A7S2V2F9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2F9_9STRA)

HSP 1 Score: 230 bits (586), Expect = 2.340e-66
Identity = 105/150 (70.00%), Postives = 129/150 (86.00%), Query Frame = 0
Query:  840 DEFSLDLKKVSKGLDKRTTIMIRNIPNKYTQAMLLQEIDASYRGSYDFFYLPIDFKNKCNVGYAFINFMDYRRIVPFFREFNGQRWKNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLIFHSSGSERGRPEPFPASSKVFR 989
            ++F LD+K+V    D+RTT+M+RNIPNKYTQ MLLQEI+ +++ +YDFFYLPIDFKNKCNVGYAFINF+    IV F+ EFNG++WKNFNSEKVC ISYARIQGK+SMISRFQNSSLM+KDGE++PL+FHSSGS +G+PE FP + K  R
Sbjct:   19 EDFKLDVKRVLARSDQRTTVMVRNIPNKYTQQMLLQEINVNHKETYDFFYLPIDFKNKCNVGYAFINFISPLSIVEFYEEFNGRKWKNFNSEKVCCISYARIQGKSSMISRFQNSSLMDKDGEFQPLLFHSSGSNKGKPEKFPIAGKTKR 168          
BLAST of mRNA_A-nodosum_M_contig1110.11.5 vs. uniprot
Match: A0A7S2SS48_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS48_9STRA)

HSP 1 Score: 243 bits (620), Expect = 9.840e-64
Identity = 111/145 (76.55%), Postives = 132/145 (91.03%), Query Frame = 0
Query:  841 EFSLDLKKVSKGLDKRTTIMIRNIPNKYTQAMLLQEIDASYRGSYDFFYLPIDFKNKCNVGYAFINFMDYRRIVPFFREFNGQRWKNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLIFHSSGSERGRPEPFPASS 985
            EFSL++ +V +G D+RTT+M+RNIPNKYTQA +L+EI+ +++G YDFFYLPIDFKNKCNVGYAF+NF+D+R IV FF +FNG+RW NFNSEKVCAI+YARIQGK SMISRFQNSSLMEKDGEYRPL+FHSSG E+GRPEPFP SS
Sbjct:  727 EFSLNIDRVMQGSDRRTTLMVRNIPNKYTQAAVLEEINENFQGLYDFFYLPIDFKNKCNVGYAFMNFIDFRSIVSFFCKFNGRRWNNFNSEKVCAITYARIQGKTSMISRFQNSSLMEKDGEYRPLLFHSSGPEKGRPEPFPTSS 871          
BLAST of mRNA_A-nodosum_M_contig1110.11.5 vs. uniprot
Match: A0A4D9D2V8_9STRA (RRM domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2V8_9STRA)

HSP 1 Score: 246 bits (627), Expect = 1.880e-63
Identity = 111/149 (74.50%), Postives = 135/149 (90.60%), Query Frame = 0
Query:  838 GGDEFSLDLKKVSKGLDKRTTIMIRNIPNKYTQAMLLQEIDASYRGSYDFFYLPIDFKNKCNVGYAFINFMDYRRIVPFFREFNGQRWKNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLIFHSSGSERGRPEPFPASSK 986
            G  EF LD++++  G+D+RTTIM+RN+PNKY+Q +LL EI+A+++G YDFFYLPIDFKNKCNVGYAFINF++ + IVPFF+EFNGQRW+NFNSEKVCAISYARIQGK SMISRF NSSLMEKDGEYRPL+F+SSG +RG+PEPFP+S K
Sbjct: 1103 GDTEFHLDVERILMGMDRRTTIMVRNVPNKYSQQLLLNEINATHKGKYDFFYLPIDFKNKCNVGYAFINFIEPKAIVPFFKEFNGQRWRNFNSEKVCAISYARIQGKQSMISRFSNSSLMEKDGEYRPLLFYSSGPDRGKPEPFPSSLK 1251          
BLAST of mRNA_A-nodosum_M_contig1110.11.5 vs. uniprot
Match: A0A7S2BIN8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BIN8_9STRA)

HSP 1 Score: 229 bits (584), Expect = 7.520e-63
Identity = 104/151 (68.87%), Postives = 130/151 (86.09%), Query Frame = 0
Query:  838 GGDEFSLDLKKVSKGLDKRTTIMIRNIPNKYTQAMLLQEIDASYRGSYDFFYLPIDFKNKCNVGYAFINFMDYRRIVPFFREFNGQRWKNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLIFHSSGSERGRPEPFPASSKVF 988
            G  EF L++  + +G+D+RTT+MIRNIPNKYTQ  +L+EI+  ++G+YDFFYLPIDFKNKCNVGYAFINF+++R IVPF  +++G+RW NFNSEKVCAI+YARIQGKASMISRFQNSSLM+K GE+RPL+F S+G  RG PEPFPA S+ F
Sbjct:  254 GDGEFGLNIDHIMQGVDRRTTVMIRNIPNKYTQMAVLEEINQHFKGTYDFFYLPIDFKNKCNVGYAFINFIEFRAIVPFVCKYHGRRWNNFNSEKVCAITYARIQGKASMISRFQNSSLMDKSGEFRPLLFQSTGVNRGLPEPFPACSQKF 404          
BLAST of mRNA_A-nodosum_M_contig1110.11.5 vs. uniprot
Match: A0A482RU13_9ARCH (RRM domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RU13_9ARCH)

HSP 1 Score: 219 bits (557), Expect = 2.610e-62
Identity = 96/151 (63.58%), Postives = 128/151 (84.77%), Query Frame = 0
Query:  836 GSGGDEFSLDLKKVSKGLDKRTTIMIRNIPNKYTQAMLLQEIDASYRGSYDFFYLPIDFKNKCNVGYAFINFMDYRRIVPFFREFNGQRWKNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLIFHSSGSERGRPEPFPASSK 986
            G G  +F+LDL+++  G + RTT+M+RNIPNKY+Q MLL+E++A ++G YDFFYLPIDFKN+CNVGYAFINF+    IV F R F GQRW++FNSEK+C+++YARIQGKA+++SRFQNSSL++KD  Y+PL+F SSG ++G+PEPFPA SK
Sbjct:   24 GEGVGDFALDLQRLQDGSETRTTLMVRNIPNKYSQQMLLEEVNAQHQGQYDFFYLPIDFKNRCNVGYAFINFLSPLHIVDFVRRFEGQRWRSFNSEKICSVTYARIQGKAALVSRFQNSSLLDKDDTYKPLLFRSSGPDQGQPEPFPAPSK 174          
BLAST of mRNA_A-nodosum_M_contig1110.11.5 vs. uniprot
Match: A0A7S3Y2P3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2P3_HETAK)

HSP 1 Score: 214 bits (546), Expect = 9.920e-61
Identity = 96/143 (67.13%), Postives = 120/143 (83.92%), Query Frame = 0
Query:  841 EFSLDLKKVSKGLDKRTTIMIRNIPNKYTQAMLLQEIDASYRGSYDFFYLPIDFKNKCNVGYAFINFMDYRRIVPFFREFNGQRWKNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLIFHSSGSERGRPEPFPA 983
            E+SL+++++  G D RTT+M+RNIPNKYTQ MLL EI+A + G+YDFFYLPIDFKN+CNVGYAF+NF+  R I  F R F+GQRW  FNSEKVCAI+YAR+QG+ +MI+RFQNSSL+ K+G YRPL+FHS+G   GRPEPFPA
Sbjct:   26 EYSLNMQQILDGADLRTTVMVRNIPNKYTQQMLLDEINAEFEGTYDFFYLPIDFKNRCNVGYAFVNFLSARTIPAFHRRFDGQRWGTFNSEKVCAIAYARLQGRRAMIARFQNSSLLAKEGRYRPLLFHSAGPLAGRPEPFPA 168          
BLAST of mRNA_A-nodosum_M_contig1110.11.5 vs. uniprot
Match: A0A3M6VP19_9STRA (RRM domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VP19_9STRA)

HSP 1 Score: 228 bits (582), Expect = 3.050e-60
Identity = 109/167 (65.27%), Postives = 131/167 (78.44%), Query Frame = 0
Query:  823 GGQMLVSAAPGCGGSGGDEFSLDLKKVSKGLDKRTTIMIRNIPNKYTQAMLLQEIDASYRGSYDFFYLPIDFKNKCNVGYAFINFMDYRRIVPFFREFNGQRWKNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLIFHSSGSERGRPEPFPASSKVFR 989
            GG+      PG    G  EFSL + KV+ G DKRTT+MIRNIPNKYTQ MLL EI+ ++RG+YDFFYLPIDFKNKCN+GYAFINF++  RI  F  EFNGQ+W NFNSEKVCAISYAR+QGK +M++RFQNSSL+EK   YRPL+F SSG  RG+PE FPAS ++ +
Sbjct:  375 GGRTAARPLPGRNDKGIGEFSLSIDKVASGEDKRTTLMIRNIPNKYTQQMLLTEINRNHRGNYDFFYLPIDFKNKCNMGYAFINFIEAARIEAFHEEFNGQKWTNFNSEKVCAISYARLQGKQAMVARFQNSSLLEKHESYRPLVFGSSGPSRGKPELFPASKQIVQ 541          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1110.11.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMB4_ECTSI5.390e-25549.50RRM_2 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A836C7Y7_9STRA2.770e-7577.42RNA recognition motif 2-domain-containing protein ... [more]
A0A836CK27_9STRA3.590e-6887.20RNA recognition motif 2-domain-containing protein ... [more]
A0A7S2V2F9_9STRA2.340e-6670.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2SS48_9STRA9.840e-6476.55Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9D2V8_9STRA1.880e-6374.50RRM domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S2BIN8_9STRA7.520e-6368.87Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A482RU13_9ARCH2.610e-6263.58RRM domain-containing protein (Fragment) n=1 Tax=a... [more]
A0A7S3Y2P3_HETAK9.920e-6167.13Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A3M6VP19_9STRA3.050e-6065.27RRM domain-containing protein n=1 Tax=Peronospora ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007201Mei2-like, C-terminal RNA recognition motifPFAMPF04059RRM_2coord: 856..952
e-value: 1.7E-45
score: 153.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 277..291
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 990..1017
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 165..179
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 757..818
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 622..715
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..223
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 581..605
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 658..675
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 505..610
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 541..561
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..291
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 622..650
NoneNo IPR availablePANTHERPTHR23189RNA RECOGNITION MOTIF-CONTAININGcoord: 841..987
NoneNo IPR availablePANTHERPTHR23189:SF98PROTEIN MEI2-LIKE 4coord: 258..680
NoneNo IPR availablePANTHERPTHR23189RNA RECOGNITION MOTIF-CONTAININGcoord: 258..680
NoneNo IPR availablePANTHERPTHR23189:SF98PROTEIN MEI2-LIKE 4coord: 841..987
IPR034454MEI2-like, RNA recognition motif 3CDDcd12531RRM3_MEI2_likecoord: 859..944
e-value: 1.02659E-55
score: 185.291
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 858..942

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1110contigA-nodosum_M_contig1110:105941..120178 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1110.11.5mRNA_A-nodosum_M_contig1110.11.5Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1110 105669..120652 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1110.11.5 ID=prot_A-nodosum_M_contig1110.11.5|Name=mRNA_A-nodosum_M_contig1110.11.5|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1018bp
MPVDDGGMNHGNFSRESPKLQGRKESSPGHFPSSSMGLAAQSTPPATFCT
QQSPHRVQSSTNLDLVDCVGSDLVLAMNNLDLGEQTRSSVTAMAATANGS
LFHGGSGGADGYANSADRPPSPLSEGFLPLAALAPPPARQPAWLTAQQQH
ARSQNEHFPARIYGSSRDGTSNQMGGDHSRGADSVSGSIHGVRGCAGEET
LNPGEYFEYPQTNGTNGSGGSSRISPGAVPPPGFGIGGGMGATPMDHGLP
SRGISGNGGGSGDGRGGGASLGGRRSRSGGSPGTTPHLDESWTAVLNAPA
GAEMMEFLTEQASRALVLWNVEAIGEDELRLACEAHGPLYYLRAEHRRKR
VVFLAYYDVRDAVNAHRSLGAELSRHLMSDHGSRPPPAVHFSVELHAGFS
YKEGSLLVHNIPSQATEAEVASVFQIYGDLRRVTRLSTPHQAHPATFSVE
FCSIQASILRRPDSRVAAQELAVRNPWGHAITVEPAIRSERERALGRQLH
ATLNRWAAEATQPPAAFPDKHHHHQHQYYHHKHHPGMLTSDDRMRSTSSS
LVLSGRSSDSDSPPPKPEDYPRDFGRIMDSYTPMTSANTTPSTTPGSTPP
SGSDAHSCLAMNAEGQSLAVQYVNMPLQHSHQHQQKYSRSAGLSPSSSRD
VHMQHQHHRVNSSGSGSSSSAGPHHMFPSASAGAGGHPPPRLHLQHMHSG
GDIHPPPPYGSPSPGAAGVGAYYDLPLGYHGERDDDRAPAAPVWAAAAVA
AGLSLSPPSARGGPGGVRGSPPLRGMPGSMMACHGGAGSFKDRSRQASLD
EGRLSGGSGGGGGGRSMRCNSDGGQMLVSAAPGCGGSGGDEFSLDLKKVS
KGLDKRTTIMIRNIPNKYTQAMLLQEIDASYRGSYDFFYLPIDFKNKCNV
GYAFINFMDYRRIVPFFREFNGQRWKNFNSEKVCAISYARIQGKASMISR
FQNSSLMEKDGEYRPLIFHSSGSERGRPEPFPASSKVFRGGAAPVGSGGG
GGSLFRERTMSGSSTVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007201Mei2-like_Rrm_C
IPR034454MEI2-like_RRM3
IPR035979RBD_domain_sf