prot_A-nodosum_M_contig1107.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1107.3.1
Unique Nameprot_A-nodosum_M_contig1107.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length340
Homology
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BLAST of mRNA_A-nodosum_M_contig1107.3.1 vs. uniprot
Match: A0A6H5KKW1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKW1_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 3.420e-30
Identity = 118/326 (36.20%), Postives = 167/326 (51.23%), Query Frame = 0 
Query:   29 VTHGAVMYASGKPRSRKRQDEDDAIFEATEAAYPILKRRASADSSATIKVQDFPCTTVRHGRVTRGDQLVRSPSFDGRMPDDVGQKIEPAGASVSWEVLGAGLSR-VRSNRFPA-------PGGAIKVKRDVMSVNTRP-RISVFMSSSAARRGAKKQSSSSGTPLDLSHRASKLSSLMTSPMGDTRGSSQASL-RGPNVTSQRIIGLRVVVPRSRSQAEQRVVDSNPPVVAMGSRRN----------------ALASPLDGMRVMPRLHRASSVGALTIAGSGDVVSRSQVLSPSGSLIQSCELSEQFAGRSQRRNLVCKVFSSG 328
            V    ++   GKP++RKR DED+A+  + E+ +P++KRR+S  +S ++     P ++ + G       L +S SF              AG + +      G++R V S++ P        PGGAIKV  +V S   RP RISVFMS+S                   +  A   S + T+P   + G  + ++ R  +  +QR+  LR+ + R RS AE+ VVD  P VVAMGS  +                A AS       +P L RAS+VGALTIAGS +V+S S VLS SG +IQSCELS++     QRRNLVC+VF SG
Sbjct:  117 VNPNLLLPIGGKPKARKRHDEDEALV-SKESVFPVMKRRSST-ASISMNPSPPPTSSQQQG-------LEKSHSFC--------VTTASAGWAPAVSHQQPGVARHVGSSQPPQQGGVASPPGGAIKVNTNVTSGTVRPPRISVFMSNSGRXXXXXXXXXXXXXXXXXAAPAPSPSMMPTAPGSYSGGVLEPTMDRTASAQAQRLKDLRITM-RDRSVAEKYVVDHTPAVVAMGSPHHLNSTSALLFSEDDHFTATASGSAAGPTVPSLRRASTVGALTIAGS-EVMSTSPVLSSSGRIIQSCELSDRVGDGGQRRNLVCRVFGSG 423
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1107.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KKW1_9PHAE3.420e-3036.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..211
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1107contigA-nodosum_M_contig1107:46317..47763 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1107.3.1mRNA_A-nodosum_M_contig1107.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1107 43214..47788 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1107.3.1 ID=prot_A-nodosum_M_contig1107.3.1|Name=mRNA_A-nodosum_M_contig1107.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=340bp
MNPGGLGEYSTDCDEWEGVRARDIAKSEVTHGAVMYASGKPRSRKRQDED
DAIFEATEAAYPILKRRASADSSATIKVQDFPCTTVRHGRVTRGDQLVRS
PSFDGRMPDDVGQKIEPAGASVSWEVLGAGLSRVRSNRFPAPGGAIKVKR
DVMSVNTRPRISVFMSSSAARRGAKKQSSSSGTPLDLSHRASKLSSLMTS
PMGDTRGSSQASLRGPNVTSQRIIGLRVVVPRSRSQAEQRVVDSNPPVVA
MGSRRNALASPLDGMRVMPRLHRASSVGALTIAGSGDVVSRSQVLSPSGS
LIQSCELSEQFAGRSQRRNLVCKVFSSGNRSSRPTPGPY*
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