prot_A-nodosum_M_contig1107.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1107.2.1
Unique Nameprot_A-nodosum_M_contig1107.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length89
Homology
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BLAST of mRNA_A-nodosum_M_contig1107.2.1 vs. uniprot
Match: A0A126X308_SARHM (Putative LOV domain-containing protein n=2 Tax=Sargassum TaxID=3015 RepID=A0A126X308_SARHM)

HSP 1 Score: 72.8 bits (177), Expect = 4.970e-13
Identity = 36/57 (63.16%), Postives = 43/57 (75.44%), Query Frame = 0 
Query:   27 QGIRFDDIFYGVSSTRDGDLLDVSSDEYIGLNVTLSPISSSEGRTQTPFAQYAVLGD 83
            +GI  DDIF GV  T DG+LLD+ SD+   LN+TLS  S SEGR QTPFAQ+AV+GD
Sbjct:   51 RGINLDDIFSGVLFTPDGELLDIPSDDDENLNITLSTTSISEGRAQTPFAQFAVVGD 107
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1107.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A126X308_SARHM4.970e-1363.16Putative LOV domain-containing protein n=2 Tax=Sar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1107contigA-nodosum_M_contig1107:25178..25444 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1107.2.1mRNA_A-nodosum_M_contig1107.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1107 25178..25444 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1107.2.1 ID=prot_A-nodosum_M_contig1107.2.1|Name=mRNA_A-nodosum_M_contig1107.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=89bp
IKSVHLLALYTFLAVCYMRFARRPSSQGIRFDDIFYGVSSTRDGDLLDVS
SDEYIGLNVTLSPISSSEGRTQTPFAQYAVLGDSHDLTG
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