prot_A-nodosum_M_contig1107.16.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1107.16.1
Unique Nameprot_A-nodosum_M_contig1107.16.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length239
Homology
BLAST of mRNA_A-nodosum_M_contig1107.16.1 vs. uniprot
Match: D8LJG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG5_ECTSI)

HSP 1 Score: 240 bits (613), Expect = 3.240e-69
Identity = 138/240 (57.50%), Postives = 161/240 (67.08%), Query Frame = 0
Query:   11 PSYASLVVKARDVMGPGPQHQALLPVAEMSKAWENVVAATYAHLKNAPVLFSRQSVRGEQGRWIAPGKAVVVDEEEDGGIG-GEERVEYAKRLGKILLWDGLPVVRIPTSLKKAMLQHNCLGADATPPFLRAHFRKTDVAHPCLALEAGGRRSLPPGA--------------PGRNG--GAVVTAGDSDARTRPPAKQLDARSNALFLLQASVAGLKADAFGELVGLPLLPLADGTLGRF 233
            P YA+LV +ARDVM  GPQHQALLP AE  K W+ VVAATY++LKN PVLFSR S  G +GRWI PG+AVVV           EERVEY KRL KILLWD LPVVR+P SLKK ML + CL ADATP FLR+HF    V+H CL LEAGG      G               P R    G V+ +G+   R RPPA + +AR+NALFLL+A+ +GL A+ FG+LVGLPLLPLA+ TLGRF
Sbjct: 1551 PIYAALVARARDVMQAGPQHQALLPAAETPKPWDTVVAATYSNLKNVPVLFSR-SATGGKGRWIPPGQAVVVXXXXXXXXXXSEERVEYTKRLTKILLWDRLPVVRLPASLKKTMLHYKCLAADATPAFLRSHFGNASVSHACLGLEAGGAAVSSDGGTTTVARVPDRGPPQPRRTAPVGGVMNSGEL-VRFRPPATRQEARTNALFLLEAAASGLGAETFGQLVGLPLLPLANRTLGRF 1788          
BLAST of mRNA_A-nodosum_M_contig1107.16.1 vs. uniprot
Match: A0A6H5K688_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K688_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 2.250e-64
Identity = 128/228 (56.14%), Postives = 153/228 (67.11%), Query Frame = 0
Query:   23 VMGPGPQHQALLPVAEMSKAWENVVAATYAHLKNAPVLFSRQSVRGEQGRWIAPGKAVVVDE-EEDGGIGGEERVEYAKRLGKILLWDGLPVVRIPTSLKKAMLQHNCLGADATPPFLRAHFRKTDVAHPCLALEAGGRRSLPPGA--------------PGRNG--GAVVTAGDSDARTRPPAKQLDARSNALFLLQASVAGLKADAFGELVGLPLLPLADGTLGRF 233
            VM  GPQHQALLP AE  + W+ VVAATY++LKN PVLFSR S  G +GRW+ PG+A+VV+E E       EERVEY KRL KILLWD LPVVR+P SLKK ML + CL ADATP FLR+HF    ++H CL LEAGG      G               P R    G V+ +G+   R R PA Q +AR+NALFLL+A+ +GL A+ FG+LVGLPLLPLA+ TLGRF
Sbjct:  874 VMQAGPQHQALLPAAETPRPWDTVVAATYSNLKNVPVLFSR-SATGGKGRWVTPGQAIVVEEVEXXXXXXSEERVEYTKRLTKILLWDRLPVVRLPASLKKTMLHYKCLAADATPAFLRSHFGNASISHACLGLEAGGTAVSSDGGSTTVARVPDRGPPQPRRTAPVGGVMNSGEL-VRFRAPATQQEARTNALFLLEAATSGLGAETFGQLVGLPLLPLANHTLGRF 1099          
BLAST of mRNA_A-nodosum_M_contig1107.16.1 vs. uniprot
Match: A0A835YL62_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL62_9STRA)

HSP 1 Score: 102 bits (253), Expect = 5.050e-21
Identity = 73/228 (32.02%), Postives = 108/228 (47.37%), Query Frame = 0
Query:   11 PSYASLVVKARDVMGPGPQHQALLPV-AEMSKAWENVVAATYAHLKNAPVLFSRQSVRGEQGRWIAPGKAVVV-----DEEEDGGIGGEERVEYAKRLGKILLWDGLPVVRIPTSLKKAMLQHNCLGADATPPFLRAHFRKTDVAHPCLALEAGGRRSLPPGAPGRNGGAVVTAGDSDARTRPPAKQLDARSNALFLLQASVAGLKADAFGELVGLPLLPLADGTLGR 232
            P+YA L+  A   +GPG Q+ +LLP  A   K W+ VV A Y  L+ A VL++        G+W+    AVV+     +   D  +    +   A++L K+L+ +G+PVV++P  LKK +L H C+ A+    F+R++F++         LE G                                  +A  NA FLL  +   L  D  GEL+GLPLLPL +GTL R
Sbjct: 2205 PAYALLLDAATKNLGPGAQYLSLLPAEASPPKPWDIVVEALYKRLRKASVLYTEAL----NGKWVPLESAVVIGAAAAEGGADNALAVAAQAAQAEQLHKVLVEEGVPVVKVPDGLKKTLLYHGCVAAEGNSAFVRSYFKERRYN---TCLEGG----------------------------------NALHNAQFLLDFAHKDLAPDRLGELIGLPLLPLTNGTLCR 2391          
BLAST of mRNA_A-nodosum_M_contig1107.16.1 vs. uniprot
Match: A0A8J9WKF0_9CHLO (Probable Sacsin n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WKF0_9CHLO)

HSP 1 Score: 64.3 bits (155), Expect = 3.870e-8
Identity = 63/221 (28.51%), Postives = 87/221 (39.37%), Query Frame = 0
Query:   11 PSYASLVVKARDVMGPGPQHQALLPVAEMSKAWENVVAATYAHLKNAPVLFSRQSVRGEQGRWIAPGKAVVVDEEEDGGIGGEERVEYAKRLGKILLWDGLPVVRIPTSLKKAMLQHNCLGADAT-PPFLRAHFRKTDVAHPCLALEAGGRRSLPPGAPGRNGGAVVTAGDSDARTRPPAKQLDARSNALFLLQASVAGLKADAFGELVGLPLLPLADGTL 230
            PSYA+L+ KA   +GP P    L PV  + + W  +V A Y  L +  V+ +        GRW+AP  AV +D            V+    L   L+  G+PV   P  + + ++QH         P  LR H R    A                         V+ A  +D R         A     + LQ  +     D+  ELVGLPLLPL DGT+
Sbjct:  400 PSYANLLAKAAQRLGPSPAFYKLWPVQPVREPWSVLVTALYRELSSRQVVHTAAG----GGRWLAPDHAVYID----------GAVQRDTALVDALIVVGVPVASGPPEVVRMLVQHIVQQPQLLCPATLRDHIRSAKQA-------------------------VIAACTTDIRR--------AAVLLAYCLQ-DIDDRDPDSCLELVGLPLLPLLDGTI 572          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1107.16.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LJG5_ECTSI3.240e-6957.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K688_9PHAE2.250e-6456.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YL62_9STRA5.050e-2132.02RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A8J9WKF0_9CHLO3.870e-828.51Probable Sacsin n=1 Tax=Coccomyxa sp. Obi TaxID=23... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..187
NoneNo IPR availablePANTHERPTHR15600SACSINcoord: 11..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1107contigA-nodosum_M_contig1107:238855..240378 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1107.16.1mRNA_A-nodosum_M_contig1107.16.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1107 238351..240378 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1107.16.1 ID=prot_A-nodosum_M_contig1107.16.1|Name=mRNA_A-nodosum_M_contig1107.16.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=239bp
MPSCCVTSSRPSYASLVVKARDVMGPGPQHQALLPVAEMSKAWENVVAAT
YAHLKNAPVLFSRQSVRGEQGRWIAPGKAVVVDEEEDGGIGGEERVEYAK
RLGKILLWDGLPVVRIPTSLKKAMLQHNCLGADATPPFLRAHFRKTDVAH
PCLALEAGGRRSLPPGAPGRNGGAVVTAGDSDARTRPPAKQLDARSNALF
LLQASVAGLKADAFGELVGLPLLPLADGTLGRFGGREER
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