prot_A-nodosum_M_contig11.49.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig11.49.1
Unique Nameprot_A-nodosum_M_contig11.49.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length115
Homology
BLAST of mRNA_A-nodosum_M_contig11.49.1 vs. uniprot
Match: A0A6H5JRD1_9PHAE (Homologous-pairing protein 2 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRD1_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 8.570e-16
Identity = 41/62 (66.13%), Postives = 47/62 (75.81%), Query Frame = 0
Query:   50 EARNAAIKAQGHSASAGEGDLKATRAGFNKLLALWVNRKRNAMDVVDMIADGMDMKPKVIMD 111
            EARN A K QG S +AG   +KA +  FNK  ALWV RKRNAMDVVDMIADGM+ KPKV+M+
Sbjct:  358 EARNGAAKGQGRSVAAG--GMKAAKQSFNKFRALWVTRKRNAMDVVDMIADGMEKKPKVVME 417          
BLAST of mRNA_A-nodosum_M_contig11.49.1 vs. uniprot
Match: D7G4U2_ECTSI (Homologous-pairing protein 2 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4U2_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 1.610e-15
Identity = 40/62 (64.52%), Postives = 46/62 (74.19%), Query Frame = 0
Query:   50 EARNAAIKAQGHSASAGEGDLKATRAGFNKLLALWVNRKRNAMDVVDMIADGMDMKPKVIMD 111
            EARN A K QG S +AG   +K  +  FNK  ALWV RKRNAMDVVDMIADGM+ KPKV+M+
Sbjct:  245 EARNGAAKGQGRSVAAG--GMKTAKQSFNKFRALWVTRKRNAMDVVDMIADGMEKKPKVVME 304          
BLAST of mRNA_A-nodosum_M_contig11.49.1 vs. uniprot
Match: A0A836CJ02_9STRA (Tat binding protein 1-interacting protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ02_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 2.340e-5
Identity = 30/65 (46.15%), Postives = 40/65 (61.54%), Query Frame = 0
Query:   48 VQEARNAAIK-AQGHSASAGEGDLKATRAGFNKLLALWVNRKRNAMDVVDMIADGMDMKPKVIMD 111
             ++ R A I+ AQG  A A    +   R  FNKL  +WV+RK  A + VD I+DGM+ KPKV+MD
Sbjct:  277 AEDQRLAGIRGAQG--AGADPAAMSKARTHFNKLRQVWVDRKNAAREWVDRISDGMEKKPKVVMD 339          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11.49.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JRD1_9PHAE8.570e-1666.13Homologous-pairing protein 2 homolog n=1 Tax=Ectoc... [more]
D7G4U2_ECTSI1.610e-1564.52Homologous-pairing protein 2 homolog n=1 Tax=Ectoc... [more]
A0A836CJ02_9STRA2.340e-546.15Tat binding protein 1-interacting protein-domain-c... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig11contigA-nodosum_M_contig11:550801..552302 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig11.49.1mRNA_A-nodosum_M_contig11.49.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig11 550444..553426 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig11.49.1 ID=prot_A-nodosum_M_contig11.49.1|Name=mRNA_A-nodosum_M_contig11.49.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=115bp
MDGLDIVVVVRCSANGGGRLQRYVLTVIAEYDFTTRHPWWCKTLNTYVQE
ARNAAIKAQGHSASAGEGDLKATRAGFNKLLALWVNRKRNAMDVVDMIAD
GMDMKPKVIMDGTC*
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