prot_A-nodosum_M_contig1097.9.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1097.9.1
Unique Nameprot_A-nodosum_M_contig1097.9.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length125
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.9.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 208 bits (530), Expect = 1.180e-67
Identity = 110/124 (88.71%), Postives = 116/124 (93.55%), Query Frame = 0 
Query:    1 MTGKGKGGRGDKKKTTSSSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVANK 124
            M+GKGKGGRG  KK+T+ S+KAGLQFPVGR+GRFLK GKY+ RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK   K
Sbjct:    1 MSGKGKGGRG--KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 122
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.9.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 206 bits (523), Expect = 2.110e-66
Identity = 110/120 (91.67%), Postives = 114/120 (95.00%), Query Frame = 0 
Query:    1 MTGKGKGGRGDKKKTTSSSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            M+GKGKGGRG  KK+TS SSKAGLQFPV RIGR+LK GKY+ RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRG--KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.9.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 206 bits (525), Expect = 4.000e-66
Identity = 109/120 (90.83%), Postives = 115/120 (95.83%), Query Frame = 0 
Query:    1 MTGKGKGGRGDKKKTTSSSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            M+GKGKGGRG  KK+T+ S+KAGLQFPVGR+GRFLK GKY+ RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:   46 MSGKGKGGRG--KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 163
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.9.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 1.080e-65
Identity = 110/120 (91.67%), Postives = 114/120 (95.00%), Query Frame = 0 
Query:    1 MTGKGKGGRGDKKKTTSSSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            M+GKGKGGRG  KK+TS SSKAGLQFPV RIGR+LK GKY+ RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:   52 MSGKGKGGRG--KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 169
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.9.1 vs. uniprot
Match: A0A836CG77_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG77_9STRA)

HSP 1 Score: 202 bits (514), Expect = 4.090e-65
Identity = 105/124 (84.68%), Postives = 115/124 (92.74%), Query Frame = 0 
Query:    1 MTGKGKGGRG-DKKKTTSSSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVAN 123
            M GKGKGGRG + KK+TS SSKAGLQFPV R+GRFLK G+Y++RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI+PRHIQLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKK A+
Sbjct:    1 MAGKGKGGRGAEAKKSTSKSSKAGLQFPVARLGRFLKVGRYAERVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHAVLLPKKTAS 124
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.9.1 vs. uniprot
Match: B7FZS7_PHATC (Histone H2A n=2 Tax=Naviculales TaxID=38748 RepID=B7FZS7_PHATC)

HSP 1 Score: 202 bits (514), Expect = 5.480e-65
Identity = 102/118 (86.44%), Postives = 113/118 (95.76%), Query Frame = 0 
Query:    3 GKGKGGRGDKKKTTSSSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            GKGKGGRGDKK+TTSSSSKAGLQFPVGRIGR+L+ GKY+ R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI+PRHI LAV+NDEELNKLLG VTIA+GGVLPNIHA+LLPKK
Sbjct:   10 GKGKGGRGDKKQTTSSSSKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGNVTIAAGGVLPNIHAILLPKK 127
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.9.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 8.470e-65
Identity = 105/120 (87.50%), Postives = 112/120 (93.33%), Query Frame = 0 
Query:    1 MTGKGKGGRGDKKKTTSSSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            M+GKGKGGRG  KK TS S+KAGLQFPVGRIGRF+K GKYS RVG GAPVY+AAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELN+LLG+ TIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRG--KKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.9.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 198 bits (503), Expect = 2.780e-63
Identity = 102/122 (83.61%), Postives = 114/122 (93.44%), Query Frame = 0 
Query:    3 GKGKGGRGDKKKTTSSSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVANK 124
            GKGKGGRGDKK   S S+KAGLQFPVGR+GRFLK G+Y++RVGAGAPVY+AAV+EYL AEVLEL+GNAARDNKK+RIIPRHIQLAVRNDEELNKLLG+VTIA+GGVLPNIHAVLLPKK  +K
Sbjct:    5 GKGKGGRGDKK-AVSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKKTRSK 125
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.9.1 vs. uniprot
Match: A0A835ZBB6_9STRA (Histone H2A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBB6_9STRA)

HSP 1 Score: 197 bits (500), Expect = 6.130e-63
Identity = 103/125 (82.40%), Postives = 113/125 (90.40%), Query Frame = 0 
Query:    1 MTGKGKGGRG-DKKKTTSSSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVANK 124
            M GKGKGGRG + KK TS S+KAGLQFPV R+GR+LK G+Y+ RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI+PRHIQLAVRNDEELN+LLG VTIASGGVLPNIHAVLLPKK A K
Sbjct:    1 MAGKGKGGRGAEGKKITSQSAKAGLQFPVARMGRYLKQGRYADRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNRLLGNVTIASGGVLPNIHAVLLPKKTAAK 125
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.9.1 vs. uniprot
Match: A0A448YXB3_9STRA (Histone H2A n=5 Tax=Bacillariophyta TaxID=2836 RepID=A0A448YXB3_9STRA)

HSP 1 Score: 196 bits (499), Expect = 8.430e-63
Identity = 101/120 (84.17%), Postives = 111/120 (92.50%), Query Frame = 0 
Query:    1 MTGKGKGGRGDKKKTTSSSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            M+GKGKGGRG KK + SSS KAGLQFPVGRIGR+L+ GKY+ R+GAGAPVYLA+VLEYL AE+LELAGNAARDNKK+RIIPRHI LAV+NDEELNKLLG VTIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRGAKKGSVSSSQKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLASVLEYLCAEILELAGNAARDNKKSRIIPRHITLAVKNDEELNKLLGNVTIASGGVLPNIHAVLLPKK 120
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1097.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI9_ECTSI1.180e-6788.71Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
A0A6H5KG79_9PHAE2.110e-6691.67Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7G193_ECTSI4.000e-6690.83Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D7FVQ5_ECTSI1.080e-6591.67Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A836CG77_9STRA4.090e-6584.68Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
B7FZS7_PHATC5.480e-6586.44Histone H2A n=2 Tax=Naviculales TaxID=38748 RepID=... [more]
D8LLP0_ECTSI8.470e-6587.50Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A835ZLE9_9STRA2.780e-6383.61Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A835ZBB6_9STRA6.130e-6382.40Histone H2A n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A448YXB3_9STRA8.430e-6384.17Histone H2A n=5 Tax=Bacillariophyta TaxID=2836 Rep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 14..36
score: 66.54
coord: 58..71
score: 90.54
coord: 72..86
score: 77.52
coord: 43..58
score: 90.36
coord: 100..118
score: 76.04
IPR002119Histone H2ASMARTSM00414h2a4coord: 3..123
e-value: 2.7E-80
score: 282.7
IPR002119Histone H2APANTHERPTHR23430HISTONE H2Acoord: 3..122
IPR002119Histone H2ACDDcd00074H2Acoord: 22..120
e-value: 1.09714E-65
score: 192.55
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 92..123
e-value: 1.2E-18
score: 66.6
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 1..124
e-value: 1.4E-64
score: 217.7
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 4..122
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 10..89
e-value: 4.0E-16
score: 59.6
NoneNo IPR availablePIRSRPIRSR037942-1PIRSR037942-1coord: 8..122
e-value: 2.9E-53
score: 179.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availablePANTHERPTHR23430:SF286HISTONE H2A.6coord: 3..122
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 22..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1097contigA-nodosum_M_contig1097:183094..183468 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1097.9.1mRNA_A-nodosum_M_contig1097.9.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1097 183094..183468 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1097.9.1 ID=prot_A-nodosum_M_contig1097.9.1|Name=mRNA_A-nodosum_M_contig1097.9.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=125bp
MTGKGKGGRGDKKKTTSSSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPV
YLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGE
VTIASGGVLPNIHAVLLPKKVANK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR032454Histone_H2A_C
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3
IPR032458Histone_H2A_CS