prot_A-nodosum_M_contig1097.27.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1097.27.1
Unique Nameprot_A-nodosum_M_contig1097.27.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length117
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.27.1 vs. uniprot
Match: D7FWI8_ECTSI (Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7FWI8_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 4.240e-69
Identity = 111/116 (95.69%), Postives = 113/116 (97.41%), Query Frame = 0 
Query:    1 MAKTPSKKSAKVPKKAGDKKKANKRIESYSSYIYKVLKQVHPDSGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKKSAK PKKAGDKK+ NKR ESYSSYIYKVLKQVHPD+GISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.27.1 vs. uniprot
Match: A0A6U0X3U9_9STRA (Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A6U0X3U9_9STRA)

HSP 1 Score: 195 bits (496), Expect = 1.750e-62
Identity = 100/116 (86.21%), Postives = 110/116 (94.83%), Query Frame = 0 
Query:    1 MAKTPSKKSAKVPKKAGDKKKANKRIESYSSYIYKVLKQVHPDSGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKKSAK PKKAGDK K  KR ESYSSYIYKVLKQVHP++GISK+GMSIMNSFIND+FER+AGE+G+L RY+KKATLSSRE+QT+VRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   15 MAKTPSKKSAKAPKKAGDKVKKGKRTESYSSYIYKVLKQVHPETGISKKGMSIMNSFINDIFERLAGEAGRLARYSKKATLSSREIQTSVRLMLPGELAKHAVSEGTKAVTKFTSS 130
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.27.1 vs. uniprot
Match: A0A836CJ22_9STRA (Histone H2B n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ22_9STRA)

HSP 1 Score: 192 bits (487), Expect = 2.710e-61
Identity = 102/117 (87.18%), Postives = 108/117 (92.31%), Query Frame = 0 
Query:    1 MAKTPSKKSAKVPKKAGD-KKKANKRIESYSSYIYKVLKQVHPDSGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAK PSKK+AK PKKA D KKK  KR ESY SYIYKVLKQVHPD+GISKRGMSIMNSFINDVFER+A E+GKLTRYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 117
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.27.1 vs. uniprot
Match: A0A485K2U0_9STRA (Histone H2B n=29 Tax=Stramenopiles TaxID=33634 RepID=A0A485K2U0_9STRA)

HSP 1 Score: 191 bits (484), Expect = 8.010e-61
Identity = 100/118 (84.75%), Postives = 110/118 (93.22%), Query Frame = 0 
Query:    1 MAKTPSKKSAKVPKKAGDKKKANK--RIESYSSYIYKVLKQVHPDSGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKKSAK PKK G+K K  K  RIESYS+YIYKVLKQVHP++GISKRGMSIMNSFIND+FER+A E+GKL+RYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKTPSKKSAKAPKKTGEKGKNRKVKRIESYSTYIYKVLKQVHPETGISKRGMSIMNSFINDIFERIASEAGKLSRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 118
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.27.1 vs. uniprot
Match: H2B_OLILU (Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=83000 RepID=H2B_OLILU)

HSP 1 Score: 190 bits (482), Expect = 1.380e-60
Identity = 97/116 (83.62%), Postives = 110/116 (94.83%), Query Frame = 0 
Query:    1 MAKTPSKKSAKVPKKAGDKKKANKRIESYSSYIYKVLKQVHPDSGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKK+AK PKKAG K+  NKR+E+YSSYIYKVLKQVHPD+GISKRGMSIMNSFIND+FER+AGE+ +L RYNK++TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTS+
Sbjct:    1 MAKTPSKKAAKAPKKAGSKR--NKRVETYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDIFERLAGEASRLARYNKRSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSN 114
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.27.1 vs. uniprot
Match: A0A836CJT3_9STRA (Histone H2B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJT3_9STRA)

HSP 1 Score: 192 bits (487), Expect = 1.820e-59
Identity = 102/117 (87.18%), Postives = 108/117 (92.31%), Query Frame = 0 
Query:    1 MAKTPSKKSAKVPKKAGD-KKKANKRIESYSSYIYKVLKQVHPDSGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAK PSKK+AK PKKA D KKK  KR ESY SYIYKVLKQVHPD+GISKRGMSIMNSFINDVFER+A E+GKLTRYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:  134 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 250
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.27.1 vs. uniprot
Match: B7FWR8_PHATC (Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 RepID=B7FWR8_PHATC)

HSP 1 Score: 186 bits (471), Expect = 6.980e-59
Identity = 96/116 (82.76%), Postives = 106/116 (91.38%), Query Frame = 0 
Query:    1 MAKTPSKKSAKVPKKAGDKKKANKRIESYSSYIYKVLKQVHPDSGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSK+SAK PKKA    K+ KR E+YSSYIYKVLKQVHPD+GISK+GMSIMNSFIND+FER+A E+GKL  YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+SS
Sbjct:    1 MAKTPSKQSAKAPKKAATGTKSKKRTETYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIATEAGKLATYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSS 116
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.27.1 vs. uniprot
Match: A0A6U6DWX5_9STRA (Histone H2B n=4 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6DWX5_9STRA)

HSP 1 Score: 182 bits (461), Expect = 2.740e-57
Identity = 96/116 (82.76%), Postives = 108/116 (93.10%), Query Frame = 0 
Query:    1 MAKTPSKKSAKVPKKAGDKKKANKRIESYSSYIYKVLKQVHPDSGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKK+A  PKKAG K ++ KR ESYSSYIYKVLKQVHPD+GISK+GMSIMNSFIND+FER+A E+GKL+ YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S+
Sbjct:    8 MAKTPSKKAA-APKKAGGK-RSRKRTESYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIASEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSA 121
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.27.1 vs. uniprot
Match: B8BX20_THAPS (Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 RepID=B8BX20_THAPS)

HSP 1 Score: 181 bits (459), Expect = 5.350e-57
Identity = 98/120 (81.67%), Postives = 112/120 (93.33%), Query Frame = 0 
Query:    1 MAKTPSKKS-AKVPKKA--GDKKK-ANKRIESYSSYIYKVLKQVHPDSGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSK++ AK  KKA  GDKKK + KR+ESYS+YIYKVLKQVHPD+GISK+GMSIMNSFIND+FER+AGE+GKL+ YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S+
Sbjct:    1 MAKTPSKQAPAKAAKKAATGDKKKRSKKRVESYSTYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIAGEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSA 120
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.27.1 vs. uniprot
Match: A0A7S2U5X6_9STRA (Histone H2B (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U5X6_9STRA)

HSP 1 Score: 181 bits (458), Expect = 6.690e-57
Identity = 95/112 (84.82%), Postives = 104/112 (92.86%), Query Frame = 0 
Query:    1 MAKTPSKKSAKVPKKAGDKKKANKRIESYSSYIYKVLKQVHPDSGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTK 112
            MAKTPSKKSA VPKKA   K+  KR+ESYSSYIYKVLKQVHPD+GISK+GMSIMNSFIND+FER+A E+GKL+ YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTK
Sbjct:    6 MAKTPSKKSA-VPKKASTGKRNKKRVESYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIASEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTK 116
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1097.27.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI8_ECTSI4.240e-6995.69Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
A0A6U0X3U9_9STRA1.750e-6286.21Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 R... [more]
A0A836CJ22_9STRA2.710e-6187.18Histone H2B n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A485K2U0_9STRA8.010e-6184.75Histone H2B n=29 Tax=Stramenopiles TaxID=33634 Rep... [more]
H2B_OLILU1.380e-6083.62Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=830... [more]
A0A836CJT3_9STRA1.820e-5987.18Histone H2B n=1 Tax=Tribonema minus TaxID=303371 R... [more]
B7FWR8_PHATC6.980e-5982.76Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 Re... [more]
A0A6U6DWX5_9STRA2.740e-5782.76Histone H2B n=4 Tax=Odontella aurita TaxID=265563 ... [more]
B8BX20_THAPS5.350e-5781.67Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 Re... [more]
A0A7S2U5X6_9STRA6.690e-5784.82Histone H2B (Fragment) n=1 Tax=Attheya septentrion... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000558Histone H2BPRINTSPR00621HISTONEH2Bcoord: 100..113
score: 92.65
coord: 87..100
score: 90.61
coord: 29..47
score: 80.45
coord: 70..87
score: 56.83
coord: 48..68
score: 67.66
IPR000558Histone H2BSMARTSM00427h2b3coord: 19..115
e-value: 3.7E-68
score: 242.4
IPR000558Histone H2BPANTHERPTHR23428HISTONE H2Bcoord: 3..116
IPR000558Histone H2BPROSITEPS00357HISTONE_H2Bcoord: 84..106
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 2..92
e-value: 1.0E-17
score: 64.7
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 1..116
e-value: 1.0E-54
score: 185.8
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 4..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availablePANTHERPTHR23428:SF256HISTONE H2B.6coord: 3..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1097contigA-nodosum_M_contig1097:238056..238406 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1097.27.1mRNA_A-nodosum_M_contig1097.27.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1097 238056..238406 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1097.27.1 ID=prot_A-nodosum_M_contig1097.27.1|Name=mRNA_A-nodosum_M_contig1097.27.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=117bp
MAKTPSKKSAKVPKKAGDKKKANKRIESYSSYIYKVLKQVHPDSGISKRG
MSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAK
HAVSEGTKAVTKFTSS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000558Histone_H2B
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold