prot_A-nodosum_M_contig1097.20.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1097.20.1
Unique Nameprot_A-nodosum_M_contig1097.20.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length104
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.20.1 vs. uniprot
Match: A0A024G0M5_9STRA (Histone H4 n=40 Tax=Stramenopiles TaxID=33634 RepID=A0A024G0M5_9STRA)

HSP 1 Score: 194 bits (493), Expect = 1.200e-62
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0 
Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLEKVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLE VIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.20.1 vs. uniprot
Match: H4_SOLLC (Histone H4 n=13 Tax=cellular organisms TaxID=131567 RepID=H4_SOLLC)

HSP 1 Score: 194 bits (492), Expect = 1.700e-62
Identity = 101/103 (98.06%), Postives = 102/103 (99.03%), Query Frame = 0 
Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLEKVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLE VIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.20.1 vs. uniprot
Match: A0A3L6V663_9STRA (Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID=A0A3L6V663_9STRA)

HSP 1 Score: 194 bits (493), Expect = 2.420e-62
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0 
Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLEKVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLE VIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   23 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 125
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.20.1 vs. uniprot
Match: B7FX68_PHATC (Histone H4 n=13 Tax=Bacillariophyta TaxID=2836 RepID=B7FX68_PHATC)

HSP 1 Score: 193 bits (490), Expect = 3.430e-62
Identity = 101/103 (98.06%), Postives = 102/103 (99.03%), Query Frame = 0 
Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLEKVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLE VIRDSVTYTEHARRKTVTAMDVVYALKRQG+TLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGKTLYGFGG 103
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.20.1 vs. uniprot
Match: C1MUM2_MICPC (Histone H4 n=20 Tax=Eukaryota TaxID=2759 RepID=C1MUM2_MICPC)

HSP 1 Score: 193 bits (490), Expect = 3.430e-62
Identity = 101/103 (98.06%), Postives = 102/103 (99.03%), Query Frame = 0 
Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLEKVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLE VIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.20.1 vs. uniprot
Match: A0A067CU13_SAPPC (Histone H4 n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CU13_SAPPC)

HSP 1 Score: 193 bits (490), Expect = 3.430e-62
Identity = 101/103 (98.06%), Postives = 102/103 (99.03%), Query Frame = 0 
Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLEKVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLE VI+DSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIKDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.20.1 vs. uniprot
Match: F0W2L9_9STRA (Histone H4 n=3 Tax=Stramenopiles TaxID=33634 RepID=F0W2L9_9STRA)

HSP 1 Score: 193 bits (490), Expect = 3.430e-62
Identity = 101/103 (98.06%), Postives = 102/103 (99.03%), Query Frame = 0 
Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLEKVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            M+GRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLE VIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 MTGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.20.1 vs. uniprot
Match: A0A7S3RVL2_9SPIT (Histone H4 (Fragment) n=2 Tax=Sar TaxID=2698737 RepID=A0A7S3RVL2_9SPIT)

HSP 1 Score: 193 bits (490), Expect = 3.540e-62
Identity = 101/103 (98.06%), Postives = 102/103 (99.03%), Query Frame = 0 
Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLEKVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLE VIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.20.1 vs. uniprot
Match: H4_ARATH (Histone H4 n=272 Tax=Eukaryota TaxID=2759 RepID=H4_ARATH)

HSP 1 Score: 192 bits (489), Expect = 4.880e-62
Identity = 100/103 (97.09%), Postives = 102/103 (99.03%), Query Frame = 0 
Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLEKVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLE VIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.20.1 vs. uniprot
Match: A0A0D2MLB1_9CHLO (Histone H4 n=6 Tax=Eukaryota TaxID=2759 RepID=A0A0D2MLB1_9CHLO)

HSP 1 Score: 192 bits (489), Expect = 4.880e-62
Identity = 100/103 (97.09%), Postives = 102/103 (99.03%), Query Frame = 0 
Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLEKVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLE V+RD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVVRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1097.20.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A024G0M5_9STRA1.200e-6299.03Histone H4 n=40 Tax=Stramenopiles TaxID=33634 RepI... [more]
H4_SOLLC1.700e-6298.06Histone H4 n=13 Tax=cellular organisms TaxID=13156... [more]
A0A3L6V663_9STRA2.420e-6299.03Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID... [more]
B7FX68_PHATC3.430e-6298.06Histone H4 n=13 Tax=Bacillariophyta TaxID=2836 Rep... [more]
C1MUM2_MICPC3.430e-6298.06Histone H4 n=20 Tax=Eukaryota TaxID=2759 RepID=C1M... [more]
A0A067CU13_SAPPC3.430e-6298.06Histone H4 n=5 Tax=Saprolegniaceae TaxID=4764 RepI... [more]
F0W2L9_9STRA3.430e-6298.06Histone H4 n=3 Tax=Stramenopiles TaxID=33634 RepID... [more]
A0A7S3RVL2_9SPIT3.540e-6298.06Histone H4 (Fragment) n=2 Tax=Sar TaxID=2698737 Re... [more]
H4_ARATH4.880e-6297.09Histone H4 n=272 Tax=Eukaryota TaxID=2759 RepID=H4... [more]
A0A0D2MLB1_9CHLO4.880e-6297.09Histone H4 n=6 Tax=Eukaryota TaxID=2759 RepID=A0A0... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001951Histone H4PRINTSPR00623HISTONEH4coord: 89..100
score: 97.79
coord: 5..16
score: 95.59
coord: 62..76
score: 86.47
coord: 77..89
score: 90.05
coord: 20..39
score: 93.38
coord: 40..60
score: 93.56
IPR001951Histone H4SMARTSM00417h44coord: 16..90
e-value: 1.2E-28
score: 111.2
IPR001951Histone H4CDDcd00076H4coord: 18..101
e-value: 5.58181E-42
score: 130.699
IPR035425CENP-T/Histone H4, histone foldPFAMPF15511CENP-T_Ccoord: 37..96
e-value: 3.7E-8
score: 33.4
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 2..103
e-value: 2.0E-58
score: 196.8
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 3..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR10484:SF185HISTONE H4coord: 1..103
NoneNo IPR availablePANTHERPTHR10484HISTONE H4coord: 1..103
IPR019809Histone H4, conserved sitePROSITEPS00047HISTONE_H4coord: 15..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1097contigA-nodosum_M_contig1097:226929..227240 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1097.20.1mRNA_A-nodosum_M_contig1097.20.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1097 226929..227240 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1097.20.1 ID=prot_A-nodosum_M_contig1097.20.1|Name=mRNA_A-nodosum_M_contig1097.20.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=104bp
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGL
IYEETRGVLKVFLEKVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYG
FGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001951Histone_H4
IPR035425CENP-T/H4_C
IPR009072Histone-fold
IPR019809Histone_H4_CS