prot_A-nodosum_M_contig1097.17.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1097.17.1
Unique Nameprot_A-nodosum_M_contig1097.17.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length136
Homology
BLAST of mRNA_A-nodosum_M_contig1097.17.1 vs. uniprot
Match: A0A453MV18_AEGTS (Histone domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453MV18_AEGTS)

HSP 1 Score: 205 bits (522), Expect = 1.370e-65
Identity = 110/136 (80.88%), Postives = 121/136 (88.97%), Query Frame = 0
Query:    1 GSHQTDRSEVHWRQGPPQAARHEGSTQVC-SCYGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNNLCAIHAKRITIMPKDIQLARRNRGERS 135
            G+++ DRS+VH RQGPPQAARH    +   +  GVKKPHRYRPGTVALREIR+YQKST+LLIRKLPFQRLVREIAQDFK+DLRFQ  AVLALQEAAEAYLVGLFEDTN LCAIHAKR+TIMPKDIQLARR RGER+
Sbjct:   34 GAYEADRSQVHRRQGPPQAARHHHRAKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTN-LCAIHAKRVTIMPKDIQLARRIRGERA 168          
BLAST of mRNA_A-nodosum_M_contig1097.17.1 vs. uniprot
Match: A0A453MV92_AEGTS (Histone domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453MV92_AEGTS)

HSP 1 Score: 201 bits (510), Expect = 4.040e-63
Identity = 110/148 (74.32%), Postives = 120/148 (81.08%), Query Frame = 0
Query:    1 GSHQTDRSEVHWRQGPPQAARHEGSTQVCSCY-------------GVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNNLCAIHAKRITIMPKDIQLARRNRGERS 135
            G+++ DRS+VH RQGPPQAARH         +             GVKKPHRYRPGTVALREIR+YQKST+LLIRKLPFQRLVREIAQDFK+DLRFQ  AVLALQEAAEAYLVGLFEDTN LCAIHAKR+TIMPKDIQLARR RGER+
Sbjct:   68 GAYEADRSQVHRRQGPPQAARHHHRAVSIVAFSFQAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTN-LCAIHAKRVTIMPKDIQLARRIRGERA 214          
BLAST of mRNA_A-nodosum_M_contig1097.17.1 vs. uniprot
Match: K0S5H6_THAOC (Histone domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S5H6_THAOC)

HSP 1 Score: 196 bits (499), Expect = 4.220e-62
Identity = 109/136 (80.15%), Postives = 116/136 (85.29%), Query Frame = 0
Query:    1 GSHQTDRSEVHWRQGP-PQAARHEGSTQVCSCYGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNNLCAIHAKRITIMPKDIQLARRNRGERS 135
            G ++ DR +VH R+GP  Q A         +  GVKKPHRYRPGTVALREIRRYQKST+LLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTN LCAIHAKR+TIMPKDIQLARR RGERS
Sbjct:   33 GPNKADRPQVHRRKGPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTDLLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTN-LCAIHAKRVTIMPKDIQLARRIRGERS 167          
BLAST of mRNA_A-nodosum_M_contig1097.17.1 vs. uniprot
Match: A0A4V5ZY76_STECR (Histone domain-containing protein n=1 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4V5ZY76_STECR)

HSP 1 Score: 196 bits (497), Expect = 1.420e-61
Identity = 108/137 (78.83%), Postives = 119/137 (86.86%), Query Frame = 0
Query:    1 GSHQTDRSEVHWRQGPPQAARHEGSTQVCSCYG--VKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNNLCAIHAKRITIMPKDIQLARRNRGERS 135
            GSHQ + S+++ R+G PQAA H+  +QV        KKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAVLALQE+AEAYLVGLFEDTN LCAIHAKR+TIMPKDIQLARR RGER+
Sbjct:   48 GSHQANCSQINRRKGSPQAAGHQSRSQVGPRQRRRQKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQESAEAYLVGLFEDTN-LCAIHAKRVTIMPKDIQLARRIRGERA 183          
BLAST of mRNA_A-nodosum_M_contig1097.17.1 vs. uniprot
Match: A0A437DNH4_ORYJA (Histone domain-containing protein n=1 Tax=Oryzias javanicus TaxID=123683 RepID=A0A437DNH4_ORYJA)

HSP 1 Score: 195 bits (495), Expect = 2.080e-61
Identity = 105/136 (77.21%), Postives = 118/136 (86.76%), Query Frame = 0
Query:    1 GSHQTDRSEVHWRQGPPQAARHEGSTQVCSCYG-VKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNNLCAIHAKRITIMPKDIQLARRNRGERS 135
            G +QTDR +++ R+   +AA H+G  +     G VKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTN LCAIHAKR+TIMPKDIQLARR RGER+
Sbjct:   39 GQNQTDRPQIYRRKSSEEAAGHQGRPKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTN-LCAIHAKRVTIMPKDIQLARRIRGERA 173          
BLAST of mRNA_A-nodosum_M_contig1097.17.1 vs. uniprot
Match: A0A251UVE6_HELAN (Putative histone superfamily protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UVE6_HELAN)

HSP 1 Score: 192 bits (488), Expect = 8.050e-61
Identity = 105/138 (76.09%), Postives = 115/138 (83.33%), Query Frame = 0
Query:    1 GSHQTDRSEVHWRQGPPQAARHEGSTQVCSCY---GVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNNLCAIHAKRITIMPKDIQLARRNRGERS 135
            GS+Q +  +V WR+G  +   H+G     S     GVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ  AVLALQEAAEAYLVGLFEDTN LCAIHAKR+TIMPKDIQLARR RGER+
Sbjct:    3 GSYQANCPQVDWREGSKETTGHQGDAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTN-LCAIHAKRVTIMPKDIQLARRIRGERA 139          
BLAST of mRNA_A-nodosum_M_contig1097.17.1 vs. uniprot
Match: A0A3B6EHV5_WHEAT (Histone domain-containing protein n=2 Tax=Triticum TaxID=4564 RepID=A0A3B6EHV5_WHEAT)

HSP 1 Score: 194 bits (492), Expect = 9.020e-61
Identity = 106/136 (77.94%), Postives = 117/136 (86.03%), Query Frame = 0
Query:    1 GSHQTDRSEVHWRQGPPQAARHEGSTQVCSCYG-VKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNNLCAIHAKRITIMPKDIQLARRNRGERS 135
            G H+ DR++V  RQGP +AA  +G  QV +  G VKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIA DFK+DLRFQ SAV ALQEAAEAYLVGLFEDTN LCAIH KR+TIMPKDIQLARR RGER+
Sbjct:   52 GPHEADRAQVDRRQGPAEAAGDQGGAQVGAGDGSVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAHDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTN-LCAIHVKRVTIMPKDIQLARRIRGERA 186          
BLAST of mRNA_A-nodosum_M_contig1097.17.1 vs. uniprot
Match: A0A3R7QIZ4_PENVA (Histone domain-containing protein n=1 Tax=Penaeus vannamei TaxID=6689 RepID=A0A3R7QIZ4_PENVA)

HSP 1 Score: 191 bits (485), Expect = 6.680e-60
Identity = 106/136 (77.94%), Postives = 115/136 (84.56%), Query Frame = 0
Query:    1 GSHQTDRSEVHWRQGP-PQAARHEGSTQVCSCYGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNNLCAIHAKRITIMPKDIQLARRNRGERS 135
            GS+Q D  +V+ RQGP  Q A         +  GVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTN LCAIHAKR+TIMPKDIQLARR RGER+
Sbjct:   38 GSYQADCPQVYRRQGPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTN-LCAIHAKRVTIMPKDIQLARRIRGERA 172          
BLAST of mRNA_A-nodosum_M_contig1097.17.1 vs. uniprot
Match: A0A6N2M9G9_SALVM (Histone domain-containing protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2M9G9_SALVM)

HSP 1 Score: 190 bits (483), Expect = 1.110e-59
Identity = 103/136 (75.74%), Postives = 116/136 (85.29%), Query Frame = 0
Query:    1 GSHQTDRSEVHWRQGPPQAARHEGSTQVCSCYG-VKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNNLCAIHAKRITIMPKDIQLARRNRGERS 135
            GSH+ D  +V  R+ P +A  ++G+ +     G VKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV ALQEAAEAYLVGLFEDTN LCAIHAKR+TIMPKDIQLARR RGER+
Sbjct:   32 GSHKADSKKVDRRESPEEATGYQGARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTN-LCAIHAKRVTIMPKDIQLARRIRGERA 166          
BLAST of mRNA_A-nodosum_M_contig1097.17.1 vs. uniprot
Match: A0A453MV05_AEGTS (Histone domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453MV05_AEGTS)

HSP 1 Score: 190 bits (483), Expect = 1.150e-59
Identity = 104/136 (76.47%), Postives = 115/136 (84.56%), Query Frame = 0
Query:    1 GSHQTDRSEVHWRQGPPQAARHEGSTQVC-SCYGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNNLCAIHAKRITIMPKDIQLARRNRGERS 135
            G+++ DR +VH RQGP         T+   +  GVKKPHRYRPGTVALREIR+YQKST+LLIRKLPFQRLVREIAQDFK+DLRFQ  AVLALQEAAEAYLVGLFEDTN LCAIHAKR+TIMPKDIQLARR RGER+
Sbjct:   33 GAYEADRPQVHRRQGPXXXXXXXXXTKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTN-LCAIHAKRVTIMPKDIQLARRIRGERA 167          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1097.17.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A453MV18_AEGTS1.370e-6580.88Histone domain-containing protein n=1 Tax=Aegilops... [more]
A0A453MV92_AEGTS4.040e-6374.32Histone domain-containing protein n=1 Tax=Aegilops... [more]
K0S5H6_THAOC4.220e-6280.15Histone domain-containing protein n=1 Tax=Thalassi... [more]
A0A4V5ZY76_STECR1.420e-6178.83Histone domain-containing protein n=1 Tax=Steinern... [more]
A0A437DNH4_ORYJA2.080e-6177.21Histone domain-containing protein n=1 Tax=Oryzias ... [more]
A0A251UVE6_HELAN8.050e-6176.09Putative histone superfamily protein n=1 Tax=Helia... [more]
A0A3B6EHV5_WHEAT9.020e-6177.94Histone domain-containing protein n=2 Tax=Triticum... [more]
A0A3R7QIZ4_PENVA6.680e-6077.94Histone domain-containing protein n=1 Tax=Penaeus ... [more]
A0A6N2M9G9_SALVM1.110e-5975.74Histone domain-containing protein n=1 Tax=Salix vi... [more]
A0A453MV05_AEGTS1.150e-5976.47Histone domain-containing protein n=1 Tax=Aegilops... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000164Histone H3/CENP-APRINTSPR00622HISTONEH3coord: 32..53
score: 89.43
coord: 113..134
score: 86.56
coord: 56..73
score: 97.46
coord: 78..96
score: 76.89
IPR000164Histone H3/CENP-ASMARTSM00428h35coord: 32..135
e-value: 2.5E-68
score: 243.0
IPR000164Histone H3/CENP-APANTHERPTHR11426HISTONE H3coord: 29..134
IPR000164Histone H3/CENP-APROSITEPS00959HISTONE_H3_2coord: 65..73
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 32..130
e-value: 1.8E-43
score: 148.0
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 2..135
e-value: 6.1E-58
score: 196.5
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 4..132
NoneNo IPR availablePANTHERPTHR11426:SF198SUBFAMILY NOT NAMEDcoord: 29..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1097contigA-nodosum_M_contig1097:216877..217284 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1097.17.1mRNA_A-nodosum_M_contig1097.17.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1097 216877..217284 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1097.17.1 ID=prot_A-nodosum_M_contig1097.17.1|Name=mRNA_A-nodosum_M_contig1097.17.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=136bp
GSHQTDRSEVHWRQGPPQAARHEGSTQVCSCYGVKKPHRYRPGTVALREI
RRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLV
GLFEDTNNLCAIHAKRITIMPKDIQLARRNRGERS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000164Histone_H3/CENP-A
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold