prot_A-nodosum_M_contig1096.23.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1096.23.1
Unique Nameprot_A-nodosum_M_contig1096.23.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length302
Homology
BLAST of mRNA_A-nodosum_M_contig1096.23.1 vs. uniprot
Match: D7FP41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP41_ECTSI)

HSP 1 Score: 404 bits (1038), Expect = 9.450e-127
Identity = 202/275 (73.45%), Postives = 224/275 (81.45%), Query Frame = 0
Query:    1 MDRADQSVTRHAAASRAAYETLYTAFASQPAGIKESHRGVLQSLRGELRIDQSFANEVAARYTAKKR---------GGKVGQPGLGSLGDEKFGTDTEEQPAIQIAWKEDHNDVCEVCSHGGNLLCCDTCSLVFHTKCLRPELKNIPKGDWNCQFCVMDNPNKTSEEREEARRNVAAMRRIQSMYMPEPRADALVDEKQKALRYRGVHWANNMFVVTHFDKHGTKEWLTLGKFASADEAARCYDRHVKATDGTKAKLNFPENASSPTIGGAGIEA 266
            MDR DQSVTRHAAASRAAYETLYTAFA+QP GI++SHRGVLQSLR ELR+DQ+FA+ V +R  +K++         GG+    G G LGD   G   E  P IQI WKEDHND+CEVCSHGG+LLCCDTCSLVFHTKC RPELK +P GDWNCQFCV D+ +   E+R EA+RNVAAMRR+Q+MYMPE R D LVDEKQKALRYRGVHWANNMFVVTHFDKHGTKEWLTLGKFASADEAARCYDRHVKATDGTKAKLNFPE+A +P    AG  A
Sbjct:    1 MDRVDQSVTRHAAASRAAYETLYTAFAAQPGGIRDSHRGVLQSLREELRLDQAFADGVKSRNDSKRQRSLRGSSAVGGEEKLSGGGGLGD--GGAGLEAAPGIQIEWKEDHNDLCEVCSHGGDLLCCDTCSLVFHTKCHRPELKEVPAGDWNCQFCVADSTHVPPEDRAEAQRNVAAMRRVQNMYMPETRGDTLVDEKQKALRYRGVHWANNMFVVTHFDKHGTKEWLTLGKFASADEAARCYDRHVKATDGTKAKLNFPESAQAPPKTAAGTVA 273          
BLAST of mRNA_A-nodosum_M_contig1096.23.1 vs. uniprot
Match: A0A6H5KSV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV1_9PHAE)

HSP 1 Score: 381 bits (978), Expect = 2.620e-117
Identity = 199/300 (66.33%), Postives = 219/300 (73.00%), Query Frame = 0
Query:    1 MDRADQSVTRHAAASRAAYETLYTAFASQPAGIKESHRGVLQSLRGELRIDQSFANEVAARYTAKK----RGGKVG-----QPGLGSLGDEKFGTDTEEQPAIQIAWKE----------------------------------DHNDVCEVCSHGGNLLCCDTCSLVFHTKCLRPELKNIPKGDWNCQFCVMDNPNKTSEEREEARRNVAAMRRIQSMYMPEPRADALVDEKQKALRYRGVHWANNMFVVTHFDKHGTKEWLTLGKFASADEAARCYDRHVKATDGTKAKLNFPENASSP 257
            MDR DQSVTRHAAASRAAYETLYTAFA+QP GI++SHR VLQSLR ELR+DQ+FA+ V +R  +K+    RG  V        G G LGD   G   E  P IQI WKE                                  DHND+CEVCSHGG+LLCCDTCSLVFHTKC RPELK +P GDWNCQFCV D+ +   E+R EA+RNVAAMRR+Q+MYMPE R D LVDEKQKALRYRGVHWANNMFVVTHFDKHGTKEWLTLGKFASADEAARCYDRHVKATDGTKAKLNFPE+A +P
Sbjct:    1 MDRVDQSVTRHAAASRAAYETLYTAFAAQPGGIRDSHRDVLQSLREELRLDQAFADGVKSRNDSKRQRSLRGSSVAAGEEKSSGGGGLGD--GGAGLEAVPGIQIEWKEASKRSTKAESRDDEFFATGGWRGGLDPLLRFLPEDHNDLCEVCSHGGDLLCCDTCSLVFHTKCHRPELKEVPAGDWNCQFCVADSSHVPPEDRAEAQRNVAAMRRVQNMYMPETRGDTLVDEKQKALRYRGVHWANNMFVVTHFDKHGTKEWLTLGKFASADEAARCYDRHVKATDGTKAKLNFPESAQAP 298          
BLAST of mRNA_A-nodosum_M_contig1096.23.1 vs. uniprot
Match: A0A6H5L295_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L295_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 8.070e-19
Identity = 62/175 (35.43%), Postives = 84/175 (48.00%), Query Frame = 0
Query:   81 DEKFGTDTEEQPAIQIAWKEDHNDVCEVCSHGGNLLCCDTCSLVFHTKCLRPELKNIPKGD-WNCQFCVMDNPNKTSEEREEARRNVAAMRRIQS---MYMPEPRADALVDEKQKALRYRGVHWANNMFVVTHFDKHGTKEWLTLGKFASADEAARCYDRHVKATDGTKAKLNFP 251
            DEK G    E   +   +K DHND+CEVC  GG+LLCCD C+LV+H  C+ P+L  +P  D W C  C            E   R +A  RR++       P P        +++A  Y+GV   N+ F      K+ T   + +G F +A  AAR YDR   +  G  A  NFP
Sbjct:  136 DEKLG----EFAVLLAPYKGDHNDICEVCDKGGDLLCCDFCNLVYHLCCVTPKLTELPDEDLWMCPACTA----------EVTSREIAKRRRLEDGGRSTSPGPGGSGRHHGQERARGYQGVKAENDAFRAFVLYKNQT---MDIGLFPTAQAAARAYDRKALSLFGDAAVCNFP 293          
BLAST of mRNA_A-nodosum_M_contig1096.23.1 vs. uniprot
Match: D7FQ97_ECTSI (Chromodomain helicase-DNA-binding protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ97_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 8.810e-19
Identity = 59/175 (33.71%), Postives = 83/175 (47.43%), Query Frame = 0
Query:   81 DEKFGTDTEEQPAIQIAWKEDHNDVCEVCSHGGNLLCCDTCSLVFHTKCLRPELKNIPKGD-WNCQFCVMDNPNKTSEEREEARRNVAAMRRIQS---MYMPEPRADALVDEKQKALRYRGVHWANNMFVVTHFDKHGTKEWLTLGKFASADEAARCYDRHVKATDGTKAKLNFP 251
            DEK G    E   +   ++ DHND+CE+C  GG+LLCCD C+LV+H  C+ P+L  +P  D W C  C            E   R +A  RR++       P P        +++   Y+GV   N+ F      K+ T   + +G F +A  AAR YDR   +  G  A  NFP
Sbjct:   66 DEKLG----EFAVLLAPYEGDHNDICEICDKGGDLLCCDFCNLVYHLCCVTPKLTELPDEDLWMCPACTA----------EVTSRQIAKRRRLEDGGRSTSPGPGGSGRHHGQERVRGYQGVKAENDAFRAFVLYKNQT---MDIGLFPTAQAAARAYDRKALSLFGDAAVCNFP 223          
BLAST of mRNA_A-nodosum_M_contig1096.23.1 vs. uniprot
Match: A0A7S3M305_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M305_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 1.390e-18
Identity = 33/51 (64.71%), Postives = 42/51 (82.35%), Query Frame = 0
Query:  100 EDHNDVCEVCSHGGNLLCCDTCSLVFHTKCLRPELKNIPKGDWNCQFCVMD 150
            +DH++VCEVC  GG+LLCCDTC+LVFH KC RP+L  IPKG W+C  C++D
Sbjct:   67 DDHDEVCEVCEKGGDLLCCDTCTLVFHLKCFRPKLSGIPKGSWSCPHCIID 117          
BLAST of mRNA_A-nodosum_M_contig1096.23.1 vs. uniprot
Match: A0A7S2WVE9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVE9_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.250e-16
Identity = 60/158 (37.97%), Postives = 77/158 (48.73%), Query Frame = 0
Query:  100 EDHNDVCEVCSHGGNLLCCDTCSLVFHTKCLRPELKNIP--KGDWNCQFCVMDNPNKTSEEREEARRNVAAMRRIQSMYMPEPRADALVDEKQKALRYRGVHWANNMF----VVTHFDKHGTKEWLTLGKFASADEAARCYDRHVKATDGTKAKLNFP 251
            E HN+ C+VC+  G LL CDTC+LVFH  C RP+L+ +P     W+C  C+ D   + +     ARR+VA MR +               E +    YRGV      F     V    KH       LG F++A EAAR YD+H     G KA LNFP
Sbjct:  204 EAHNEACDVCNECGELLMCDTCTLVFHPDCHRPKLRKLPGKSETWSCSHCIADGSAEGNAVA--ARRSVAKMREL---------------EVKNRSAYRGVVRRGEHFRAQVQVNGVLKH-------LGNFSTAVEAAREYDKHATKAFGDKAVLNFP 337          
BLAST of mRNA_A-nodosum_M_contig1096.23.1 vs. uniprot
Match: A0A7S2E5U7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E5U7_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 3.700e-15
Identity = 37/74 (50.00%), Postives = 48/74 (64.86%), Query Frame = 0
Query:  102 HNDVCEVCSHGGNLLCCDTCSLVFHTKCLRPELKNIPKGDWNCQFCVMDNPNKTSEEREEARRNVAAMRRIQSM 175
            HND+CEVC+ GG+LLCC TC+LVFH  C RP LK +P  +W+C +CV         E  E RRN  A+R I+ +
Sbjct:  280 HNDLCEVCNTGGDLLCCATCNLVFHQACSRPVLKKLPPDNWSCAYCVSSGVTGYKREARERRRNSQAVREIERL 353          
BLAST of mRNA_A-nodosum_M_contig1096.23.1 vs. uniprot
Match: A0A7S4QH92_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QH92_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 6.630e-15
Identity = 43/97 (44.33%), Postives = 57/97 (58.76%), Query Frame = 0
Query:  102 HNDVCEVCSHGGNLLCCDTCSLVFHTKCLRPELKNIPKGDWNCQFCVMDNPNKTSEEREEARRNVAAMRRIQSMY--MPEPRADALVDEKQKALRYR 196
            HND+CEVC+ GG+LLCC TC+LVFH  C RP LK +P  +W+C +CV         E  E RRN  A+R I+ +   + E RA      + KA + R
Sbjct:  280 HNDLCEVCNTGGDLLCCATCNLVFHQACSRPVLKKLPPDNWSCAYCVSSGVTGYKREARERRRNPQAVREIERLQREIRERRAFVAAQAEAKAEKER 376          
BLAST of mRNA_A-nodosum_M_contig1096.23.1 vs. uniprot
Match: K0SZ98_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SZ98_THAOC)

HSP 1 Score: 84.3 bits (207), Expect = 2.250e-14
Identity = 34/67 (50.75%), Postives = 49/67 (73.13%), Query Frame = 0
Query:  102 HNDVCEVCSHGGNLLCCDTCSLVFHTKCLRPELKNIPKGDWNCQFCVMDN--PNKTSEEREEARRNV 166
            HND+CE C  GG+LLCC TC+LVFH +C RP+L  IP+ DW+C +C+     P+KT ++++ AR +V
Sbjct: 1762 HNDLCETCGLGGDLLCCSTCNLVFHLECTRPKLATIPENDWSCAYCIASGEIPSKTRKQQQAARASV 1828          
BLAST of mRNA_A-nodosum_M_contig1096.23.1 vs. uniprot
Match: A0A369RVZ2_9METZ (Chromodomain-helicase-DNA-binding protein 3-like protein n=1 Tax=Trichoplax sp. H2 TaxID=287889 RepID=A0A369RVZ2_9METZ)

HSP 1 Score: 81.3 bits (199), Expect = 2.390e-13
Identity = 35/71 (49.30%), Postives = 46/71 (64.79%), Query Frame = 0
Query:   78 SLGDEKFGTDTEEQPAIQIAWKEDHNDVCEVCSHGGNLLCCDTCSLVFHTKCLRPELKNIPKGDWNCQFCV 148
            S GD+K   DT +Q +      +DHND C VC  GG LLCCD+C L +H +CL P L++IP+GDW C  C+
Sbjct:  249 SKGDQK---DTSKQESSSELAFDDHNDFCHVCKDGGQLLCCDSCPLSYHLRCLNPPLEDIPEGDWRCPRCL 316          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1096.23.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP41_ECTSI9.450e-12773.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSV1_9PHAE2.620e-11766.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L295_9PHAE8.070e-1935.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQ97_ECTSI8.810e-1933.71Chromodomain helicase-DNA-binding protein, putativ... [more]
A0A7S3M305_9STRA1.390e-1864.71Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S2WVE9_9STRA1.250e-1637.97Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2E5U7_9STRA3.700e-1550.00Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S4QH92_9STRA6.630e-1544.33Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
K0SZ98_THAOC2.250e-1450.75Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A369RVZ2_9METZ2.390e-1349.30Chromodomain-helicase-DNA-binding protein 3-like p... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 194..257
e-value: 0.0036
score: 12.7
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 105..148
e-value: 5.5E-10
score: 49.2
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 99..170
e-value: 3.6E-19
score: 70.2
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10AP2/ERF domaincoord: 193..253
e-value: 2.4E-10
score: 42.4
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 105..148
e-value: 5.3E-9
score: 35.8
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 103..150
score: 9.774799
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..294
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..302
NoneNo IPR availablePANTHERPTHR24102PHD FINGER PROTEINcoord: 61..184
NoneNo IPR availableCDDcd15532PHD2_CHD_IIcoord: 105..147
e-value: 4.80688E-19
score: 76.9355
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 106..147
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 194..252
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 97..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1096contigA-nodosum_M_contig1096:153348..176619 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1096.23.1mRNA_A-nodosum_M_contig1096.23.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1096 153111..176619 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1096.23.1 ID=prot_A-nodosum_M_contig1096.23.1|Name=mRNA_A-nodosum_M_contig1096.23.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=302bp
MDRADQSVTRHAAASRAAYETLYTAFASQPAGIKESHRGVLQSLRGELRI
DQSFANEVAARYTAKKRGGKVGQPGLGSLGDEKFGTDTEEQPAIQIAWKE
DHNDVCEVCSHGGNLLCCDTCSLVFHTKCLRPELKNIPKGDWNCQFCVMD
NPNKTSEEREEARRNVAAMRRIQSMYMPEPRADALVDEKQKALRYRGVHW
ANNMFVVTHFDKHGTKEWLTLGKFASADEAARCYDRHVKATDGTKAKLNF
PENASSPTIGGAGIEATSFGAPQTTNRSQQTTEGVDTITASDGSGTAGGG
AG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR036955AP2/ERF_dom_sf
IPR019787Znf_PHD-finger
IPR019786Zinc_finger_PHD-type_CS
IPR016177DNA-bd_dom_sf
IPR011011Znf_FYVE_PHD