prot_A-nodosum_M_contig1096.22.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1096.22.1
Unique Nameprot_A-nodosum_M_contig1096.22.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length47
Homology
BLAST of mRNA_A-nodosum_M_contig1096.22.1 vs. uniprot
Match: D7FP42_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP42_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 4.750e-18
Identity = 39/44 (88.64%), Postives = 42/44 (95.45%), Query Frame = 0
Query:    1 MVTGIWKCSACSKISAGGAYTLNTPAAVTVRSTIARLRKGQSDT 44
            MV+GIWKCSAC KISAGGAYTLNTPAAVTVRSTIARLRKG ++T
Sbjct:   50 MVSGIWKCSACGKISAGGAYTLNTPAAVTVRSTIARLRKGATET 93          
BLAST of mRNA_A-nodosum_M_contig1096.22.1 vs. uniprot
Match: A0A836C955_9STRA (Putative 60S ribosomal protein L37a n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C955_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 9.730e-13
Identity = 30/44 (68.18%), Postives = 35/44 (79.55%), Query Frame = 0
Query:    2 VTGIWKCSACSKISAGGAYTLNTPAAVTVRSTIARLRKGQSDTV 45
            V GIW C  C K+ AGGAYTLNTPAA TVRSTIARLR+ Q++ +
Sbjct:   51 VVGIWSCGGCKKVVAGGAYTLNTPAAATVRSTIARLRRAQAEAI 94          
BLAST of mRNA_A-nodosum_M_contig1096.22.1 vs. uniprot
Match: A0A7S1ZP16_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZP16_TRICV)

HSP 1 Score: 63.5 bits (153), Expect = 1.710e-11
Identity = 30/43 (69.77%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    3 TGIWKCSACSKISAGGAYTLNTPAAVTVRSTIARLRKGQSDTV 45
            TGIW C +C K+ AGGAY L+TPAAVT RSTI RLRKGQ++ V
Sbjct:  101 TGIWNCKSCRKVVAGGAYMLSTPAAVTARSTIGRLRKGQAEQV 143          
BLAST of mRNA_A-nodosum_M_contig1096.22.1 vs. uniprot
Match: A0A7S2CLR7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CLR7_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 9.880e-11
Identity = 29/38 (76.32%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    4 GIWKCSACSKISAGGAYTLNTPAAVTVRSTIARLRKGQ 41
            GIW C +C K+ AGGAYTLNTPAA TVRS IARLRK Q
Sbjct:   70 GIWNCKSCKKVLAGGAYTLNTPAAATVRSAIARLRKTQ 107          
BLAST of mRNA_A-nodosum_M_contig1096.22.1 vs. uniprot
Match: B8C9Z3_THAPS (Uncharacterized protein n=2 Tax=Thalassiosira TaxID=35127 RepID=B8C9Z3_THAPS)

HSP 1 Score: 60.1 bits (144), Expect = 1.330e-10
Identity = 29/42 (69.05%), Postives = 35/42 (83.33%), Query Frame = 0
Query:    2 VTGIWKCSACSKISAGGAYTLNTPAAVTVRSTIARLRKGQSD 43
            V GIWKC +C K+ AGGAY+L+T +AVTVRSTIARLRK Q +
Sbjct:   52 VVGIWKCKSCKKVVAGGAYSLSTASAVTVRSTIARLRKIQQE 93          
BLAST of mRNA_A-nodosum_M_contig1096.22.1 vs. uniprot
Match: A0A1Z5K1E2_FISSO (Large subunit ribosomal protein L37Ae n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K1E2_FISSO)

HSP 1 Score: 58.9 bits (141), Expect = 3.710e-10
Identity = 28/40 (70.00%), Postives = 33/40 (82.50%), Query Frame = 0
Query:    4 GIWKCSACSKISAGGAYTLNTPAAVTVRSTIARLRKGQSD 43
            GIW+C  C K+ AGGAYTL TP+AVTVRSTI RLRK Q++
Sbjct:   53 GIWECKTCRKVVAGGAYTLATPSAVTVRSTIGRLRKMQAE 92          
BLAST of mRNA_A-nodosum_M_contig1096.22.1 vs. uniprot
Match: A0A485LCL6_9STRA (Aste57867_19186 protein n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485LCL6_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 3.800e-10
Identity = 27/39 (69.23%), Postives = 33/39 (84.62%), Query Frame = 0
Query:    3 TGIWKCSACSKISAGGAYTLNTPAAVTVRSTIARLRKGQ 41
            TGIWKC +C K++AGGAY LNT +A TVRST+ARLRK +
Sbjct:   52 TGIWKCKSCYKVTAGGAYLLNTASAATVRSTLARLRKAR 90          
BLAST of mRNA_A-nodosum_M_contig1096.22.1 vs. uniprot
Match: C1EIY1_MICCC (Ribosomal protein L37ae n=3 Tax=Micromonas TaxID=38832 RepID=C1EIY1_MICCC)

HSP 1 Score: 57.8 bits (138), Expect = 1.010e-9
Identity = 28/36 (77.78%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    4 GIWKCSACSKISAGGAYTLNTPAAVTVRSTIARLRK 39
            GIWKC+ C K  AGGAYTLNT AAVTVRSTI RLR+
Sbjct:   53 GIWKCAGCKKTKAGGAYTLNTSAAVTVRSTIRRLRE 88          
BLAST of mRNA_A-nodosum_M_contig1096.22.1 vs. uniprot
Match: E1Z5P0_CHLVA (60S ribosomal protein L37a n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z5P0_CHLVA)

HSP 1 Score: 57.8 bits (138), Expect = 1.010e-9
Identity = 28/38 (73.68%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    2 VTGIWKCSACSKISAGGAYTLNTPAAVTVRSTIARLRK 39
            V GIWKC AC+K  AGGAY LNT A+VTVRSTI RLR+
Sbjct:   51 VVGIWKCKACNKTQAGGAYVLNTAASVTVRSTIRRLRE 88          
BLAST of mRNA_A-nodosum_M_contig1096.22.1 vs. uniprot
Match: R8BTK1_PHAM7 (Putative 60s ribosomal protein l43 protein n=1 Tax=Phaeoacremonium minimum (strain UCR-PA7) TaxID=1286976 RepID=R8BTK1_PHAM7)

HSP 1 Score: 57.4 bits (137), Expect = 1.180e-9
Identity = 25/37 (67.57%), Postives = 32/37 (86.49%), Query Frame = 0
Query:    3 TGIWKCSACSKISAGGAYTLNTPAAVTVRSTIARLRK 39
            TGIWKCS C K++AGGAYT++TPAA  +RST+ RLR+
Sbjct:   44 TGIWKCSGCKKVTAGGAYTVSTPAAAAMRSTLRRLRE 80          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1096.22.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP42_ECTSI4.750e-1888.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C955_9STRA9.730e-1368.18Putative 60S ribosomal protein L37a n=1 Tax=Tribon... [more]
A0A7S1ZP16_TRICV1.710e-1169.77Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]
A0A7S2CLR7_9STRA9.880e-1176.32Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
B8C9Z3_THAPS1.330e-1069.05Uncharacterized protein n=2 Tax=Thalassiosira TaxI... [more]
A0A1Z5K1E2_FISSO3.710e-1070.00Large subunit ribosomal protein L37Ae n=1 Tax=Fist... [more]
A0A485LCL6_9STRA3.800e-1069.23Aste57867_19186 protein n=8 Tax=Saprolegniaceae Ta... [more]
C1EIY1_MICCC1.010e-977.78Ribosomal protein L37ae n=3 Tax=Micromonas TaxID=3... [more]
E1Z5P0_CHLVA1.010e-973.6860S ribosomal protein L37a n=1 Tax=Chlorella varia... [more]
R8BTK1_PHAM71.180e-967.57Putative 60s ribosomal protein l43 protein n=1 Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002674Ribosomal protein L37aePFAMPF01780Ribosomal_L37aecoord: 2..38
e-value: 6.3E-13
score: 48.6
IPR011331Ribosomal protein L37ae/L37eGENE3D2.20.25.30coord: 1..45
e-value: 5.6E-13
score: 50.8
NoneNo IPR availablePANTHERPTHR4814960S RIBOSOMAL PROTEIN L37A-2coord: 3..39
NoneNo IPR availablePANTHERPTHR48149:SF260S RIBOSOMAL PROTEIN L37Acoord: 3..39
IPR011332Zinc-binding ribosomal proteinSUPERFAMILY57829Zn-binding ribosomal proteinscoord: 3..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1096contigA-nodosum_M_contig1096:149389..150067 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1096.22.1mRNA_A-nodosum_M_contig1096.22.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1096 148574..152852 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1096.22.1 ID=prot_A-nodosum_M_contig1096.22.1|Name=mRNA_A-nodosum_M_contig1096.22.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=47bp
MVTGIWKCSACSKISAGGAYTLNTPAAVTVRSTIARLRKGQSDTVA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002674Ribosomal_L37ae
IPR011331Ribosomal_L37ae/L37e
IPR011332Ribosomal_zn-bd