prot_A-nodosum_M_contig1096.20.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1096.20.1
Unique Nameprot_A-nodosum_M_contig1096.20.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length212
Homology
BLAST of mRNA_A-nodosum_M_contig1096.20.1 vs. uniprot
Match: D7FP44_ECTSI (Sirohydrochlorin ferrochelatase, putative chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP44_ECTSI)

HSP 1 Score: 229 bits (585), Expect = 3.200e-73
Identity = 110/128 (85.94%), Postives = 121/128 (94.53%), Query Frame = 0
Query:   80 VGVIVCDHGSQRENANEMLFEVAERYRAFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESVEEGAWQYGG 207
            VGVIVCDHGS+RENAN MLFEVAERYR+F+GF+IVEAAHMELA+PSIE+AFDRCVAAGAQK+VLHPFFLSPGRHVTSDIP L+ AAAK+HP V WVVSEPLGLQELMPRVMHAAVSESV  GAW++GG
Sbjct:   87 VGVIVCDHGSRRENANTMLFEVAERYRSFSGFEIVEAAHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPALMVAAAKRHPGVGWVVSEPLGLQELMPRVMHAAVSESVAGGAWRHGG 214          
BLAST of mRNA_A-nodosum_M_contig1096.20.1 vs. uniprot
Match: A0A836CEJ2_9STRA (CbiX-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEJ2_9STRA)

HSP 1 Score: 140 bits (354), Expect = 2.370e-39
Identity = 71/118 (60.17%), Postives = 90/118 (76.27%), Query Frame = 0
Query:   97 MLFEVAERYR--------AFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESVEEGAWQYG 206
            M+ EVA R+R        A A   ++E AHMELA+P+IEQAFD+CVAAGA+ +VLHPFFLSPGRHV+SDIP L+AAAA +HP V W VSEPLGL  LMP++M+ AV+ +++E  WQ G
Sbjct:    1 MINEVAARFRQQAEASEAAAAAACVIEVAHMELAEPTIEQAFDKCVAAGAKAVVLHPFFLSPGRHVSSDIPELLAAAASRHPGVKWKVSEPLGLAPLMPQLMNDAVAAALQEPEWQGG 118          
BLAST of mRNA_A-nodosum_M_contig1096.20.1 vs. uniprot
Match: A0A350CGA9_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetia TaxID=203683 RepID=A0A350CGA9_9PLAN)

HSP 1 Score: 136 bits (343), Expect = 1.190e-37
Identity = 64/119 (53.78%), Postives = 90/119 (75.63%), Query Frame = 0
Query:   81 GVIVCDHGSQRENANEMLFEVAERYRAFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESVE 199
            G+++ DHGS+R  +N++L   A+R+  ++G+ IVE AHMELA+PSI+QAFDRCVA GA++IV+ P+FLSPGRH T DIPGL+  AA  HPEV W+V+ P GL + + +    AVSE ++
Sbjct:    9 GLLIVDHGSRRAESNQLLHHAADRFARYSGWQIVEPAHMELAEPSIQQAFDRCVARGARRIVVFPWFLSPGRHWTEDIPGLVEQAAAVHPEVQWLVTPPFGLHQGLLQ----AVSERID 123          
BLAST of mRNA_A-nodosum_M_contig1096.20.1 vs. uniprot
Match: A0A4D9D8W1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8W1_9STRA)

HSP 1 Score: 138 bits (348), Expect = 1.240e-37
Identity = 68/121 (56.20%), Postives = 84/121 (69.42%), Query Frame = 0
Query:   80 VGVIVCDHGSQRENANEMLFEVAERYRAFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESVEE 200
            VGVIV DHGS+R+ ANE L  VA  ++A +G+++VE AHMEL +PSI  AF RCV  GA  I+ HPFFLS GRHV  DIP L+  AA   P V W +S+PLGLQ  +PR+M  AV E + E
Sbjct:   57 VGVIVVDHGSRRKEANEALESVASEFKALSGYELVEPAHMELCEPSIATAFGRCVERGATFIICHPFFLSRGRHVAEDIPNLLEEAASIFPGVEWALSQPLGLQADIPRLMQQAVEECIAE 177          
BLAST of mRNA_A-nodosum_M_contig1096.20.1 vs. uniprot
Match: A0A5Q4H7Y2_9PLAN (Sirohydrochlorin cobaltochelatase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A5Q4H7Y2_9PLAN)

HSP 1 Score: 136 bits (342), Expect = 2.900e-37
Identity = 62/120 (51.67%), Postives = 86/120 (71.67%), Query Frame = 0
Query:   80 VGVIVCDHGSQRENANEMLFEVAERYRAFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESVE 199
            +GVIV DHGS+R  AN+ML +V + ++  +G+ IVE AHMELA+PSI  AFD CVA GA+ +VLHP+FL PG+H + DIP L   AA KHP++ ++V+ PLGL  LM  +M   ++  +E
Sbjct:    9 IGVIVVDHGSRRAEANQMLLDVVQMFQQRSGYSIVEPAHMELAEPSIATAFDHCVARGAEMVVLHPYFLLPGKHWSEDIPALARQAASKHPKIPFMVTAPLGLHPLMAEIMQQRIARCLE 128          
BLAST of mRNA_A-nodosum_M_contig1096.20.1 vs. uniprot
Match: A0A7G9NWY9_9BACT (Uncharacterized protein n=1 Tax=Planctomycetales bacterium zrk34 TaxID=2723666 RepID=A0A7G9NWY9_9BACT)

HSP 1 Score: 135 bits (340), Expect = 5.800e-37
Identity = 61/119 (51.26%), Postives = 85/119 (71.43%), Query Frame = 0
Query:   80 VGVIVCDHGSQRENANEMLFEVAERYRAFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESV 198
            +G+IV DHGS+R  +N++L  V + +   + + I+E AHMELA+P+IEQAFDRCV  GA+ +V HPFFL PG+H   DIP L AAAA KHP + W+V+ P+G+ E MP VM+ A+   +
Sbjct:   10 IGIIVVDHGSRRPESNDLLLAVVKLFAEQSDYPIIEPAHMELAEPTIEQAFDRCVQRGAKVVVCHPFFLLPGKHWNQDIPNLTAAAAGKHPGIRWMVTAPIGMNEKMPLVMNDAIDHCL 128          
BLAST of mRNA_A-nodosum_M_contig1096.20.1 vs. uniprot
Match: W7TSP7_9STRA (Cobalamin (Vitamin B12) biosynthesis CbiX n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSP7_9STRA)

HSP 1 Score: 138 bits (348), Expect = 6.470e-37
Identity = 68/121 (56.20%), Postives = 84/121 (69.42%), Query Frame = 0
Query:   80 VGVIVCDHGSQRENANEMLFEVAERYRAFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESVEE 200
            VGVIV DHGS+R+ ANE L  VA  ++A +G+++VE AHMEL +PSI  AF RCV  GA  I+ HPFFLS GRHV  DIP L+  AA   P V W +S+PLGLQ  +PR+M  AV E + E
Sbjct:  118 VGVIVVDHGSRRKEANEALESVASEFKALSGYELVEPAHMELCEPSIATAFGRCVERGATFIICHPFFLSRGRHVAEDIPNLLEEAASIFPGVEWALSQPLGLQADIPRLMQQAVEECIAE 238          
BLAST of mRNA_A-nodosum_M_contig1096.20.1 vs. uniprot
Match: A0A518C237_9BACT (Sirohydrochlorin cobaltochelatase n=2 Tax=Bremerella TaxID=2714594 RepID=A0A518C237_9BACT)

HSP 1 Score: 133 bits (334), Expect = 4.510e-36
Identity = 66/128 (51.56%), Postives = 86/128 (67.19%), Query Frame = 0
Query:   78 ETVGVIVCDHGSQRENANEMLFEVAERYRAFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESV---EEGA 202
            E +G+I+ DHGS+R  +N++L EV E +R  AG+ IVE AHMEL +PSI QAF +CV  GA +IV+HP+FLSPGRH   DIP L   AA  HP +  +V+ PLGL  LM +VM   +   +   EEGA
Sbjct:    9 ENLGIIIVDHGSRRAESNDLLLEVVELFRQTAGYKIVEPAHMELVEPSIAQAFQKCVGQGATRIVVHPYFLSPGRHWHEDIPRLAQEAAANHPGITHLVTAPLGLHPLMAKVMQERIETCLAHCEEGA 136          
BLAST of mRNA_A-nodosum_M_contig1096.20.1 vs. uniprot
Match: A0A518DNN6_9BACT (Sirohydrochlorin cobaltochelatase n=1 Tax=Lignipirellula cremea TaxID=2528010 RepID=A0A518DNN6_9BACT)

HSP 1 Score: 132 bits (331), Expect = 6.230e-36
Identity = 61/122 (50.00%), Postives = 89/122 (72.95%), Query Frame = 0
Query:   79 TVGVIVCDHGSQRENANEMLFEVAERYRAFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESVEE 200
            TVGV++ DHGS+RE +N ML EVA  +   + + I+E AHMELA+P+++ AFDRC+A GA++IV+HP+FL PG H   DIP L A AA + P+V +VV+EPLGL  L+ +V+   ++ ++ E
Sbjct:    6 TVGVVLVDHGSRREESNAMLLEVAAMFAQSSPYTIIEPAHMELAEPTLQTAFDRCIARGAEQIVVHPYFLLPGNHSREDIPRLAAEAAARRPDVPYVVTEPLGLHPLLGQVIRDRIAAALAE 127          
BLAST of mRNA_A-nodosum_M_contig1096.20.1 vs. uniprot
Match: A0A518DEM9_9BACT (Sirohydrochlorin ferrochelatase n=1 Tax=Pirellulimonas nuda TaxID=2528009 RepID=A0A518DEM9_9BACT)

HSP 1 Score: 132 bits (333), Expect = 7.400e-36
Identity = 69/143 (48.25%), Postives = 94/143 (65.73%), Query Frame = 0
Query:   75 GSTETVGVIVCDHGSQRENANEMLFEVAERYRAFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESVEEGAWQY------GGGGNC 211
            G+ E+VG+IV DHGS+R+ +N +L EVAE +R  +G +IVE AHMELA+PSI  AFDRCV  GA+++V+ P+FL PGRH   DIP L A AA +HP V+ +V+ PLG+  L+  VM   ++  +   A         G GG C
Sbjct:   13 GADESVGIIVVDHGSRRDASNALLLEVAELFRRQSGMEIVEPAHMELAEPSIATAFDRCVERGAKRVVVMPYFLGPGRHWDQDIPALSAKAAARHPGVSHLVTAPLGIDPLIAAVMEDRIAVCLTNAAGAEAACNACGDGGRC 155          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1096.20.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP44_ECTSI3.200e-7385.94Sirohydrochlorin ferrochelatase, putative chloropl... [more]
A0A836CEJ2_9STRA2.370e-3960.17CbiX-domain-containing protein n=1 Tax=Tribonema m... [more]
A0A350CGA9_9PLAN1.190e-3753.78Uncharacterized protein n=2 Tax=Planctomycetia Tax... [more]
A0A4D9D8W1_9STRA1.240e-3756.20Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A5Q4H7Y2_9PLAN2.900e-3751.67Sirohydrochlorin cobaltochelatase n=1 Tax=Planctom... [more]
A0A7G9NWY9_9BACT5.800e-3751.26Uncharacterized protein n=1 Tax=Planctomycetales b... [more]
W7TSP7_9STRA6.470e-3756.20Cobalamin (Vitamin B12) biosynthesis CbiX n=1 Tax=... [more]
A0A518C237_9BACT4.510e-3651.56Sirohydrochlorin cobaltochelatase n=2 Tax=Bremerel... [more]
A0A518DNN6_9BACT6.230e-3650.00Sirohydrochlorin cobaltochelatase n=1 Tax=Lignipir... [more]
A0A518DEM9_9BACT7.400e-3648.25Sirohydrochlorin ferrochelatase n=1 Tax=Pirellulim... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002762Sirohydrochlorin cobaltochelatase CbiX-likePFAMPF01903CbiXcoord: 87..191
e-value: 3.3E-26
score: 91.7
NoneNo IPR availableGENE3D3.40.50.1400coord: 76..201
e-value: 1.3E-31
score: 111.4
NoneNo IPR availablePIRSRPIRSR033579-3PIRSR033579-3coord: 82..158
e-value: 0.0024
score: 15.0
NoneNo IPR availablePIRSRPIRSR033579-1PIRSR033579-1coord: 82..158
e-value: 0.0024
score: 15.0
NoneNo IPR availablePANTHERPTHR33542SIROHYDROCHLORIN FERROCHELATASE, CHLOROPLASTICcoord: 68..194
NoneNo IPR availablePANTHERPTHR33542:SF3SIROHYDROCHLORIN FERROCHELATASE, CHLOROPLASTICcoord: 68..194
NoneNo IPR availableCDDcd03416CbiX_SirB_Ncoord: 81..181
e-value: 4.1983E-34
score: 115.362
NoneNo IPR availableSUPERFAMILY53800Chelatasecoord: 79..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1096contigA-nodosum_M_contig1096:124518..126100 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1096.20.1mRNA_A-nodosum_M_contig1096.20.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1096 124445..126590 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1096.20.1 ID=prot_A-nodosum_M_contig1096.20.1|Name=mRNA_A-nodosum_M_contig1096.20.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=212bp
MRVVCLLLAIAIGVAAAFVPNPSTTTRTLSARLQDRRLSTASPLGANQRR
VRLALHELSASATVSTTEGGPRVDGSTETVGVIVCDHGSQRENANEMLFE
VAERYRAFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAQKIVLHPFFLSP
GRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESVEE
GAWQYGGGGNC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002762CbiX-like