prot_A-nodosum_M_contig10948.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig10948.3.1
Unique Nameprot_A-nodosum_M_contig10948.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length223
Homology
BLAST of mRNA_A-nodosum_M_contig10948.3.1 vs. uniprot
Match: D7G0J2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J2_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 1.640e-38
Identity = 89/182 (48.90%), Postives = 115/182 (63.19%), Query Frame = 0
Query:   43 LPHVALPHSYKPIKIVVGSMDCDHTTLACTELLVSARRGASNVPGGVVVFGIDAEWSVWATGVR-PVAVVQLSTIEGYTVVFHIKPNERRVGVFPKALKELLENGDVPLAGVTVGHDLTLIRNSYNVEGTGEEDLGQLATKHLGIGVGSRSLEDLCATLLGQRLSKGNVRMSNWEQALSDDQ 223
            LP++  P    PI + V S +C+ ++  C +LL   RR  ++ P    V G D EWSV  +G R  VA+VQLS  +GYTV+FH+K  ERR G+ P ALKELL N  + LAGV+V  DLT + NSY V GT   D+GQLA  HL +  G+RSL+ L A LL +RL+K  VR SNWE  L+ DQ
Sbjct:   78 LPNLEFPAGASPILVRVASENCELSSRICLQLL---RRARASAPA---VLGFDIEWSVRPSGPRRQVALVQLSARDGYTVLFHLKYEERRRGILPTALKELLVNDTIQLAGVSVRGDLTHLFNSYGVHGTKPVDIGQLAGVHLHVKNGARSLQALTAELLHRRLAKDAVRTSNWETTLTKDQ 253          
BLAST of mRNA_A-nodosum_M_contig10948.3.1 vs. uniprot
Match: A0A8H8A4N4_9ASCO (3'-5' exonuclease domain-containing protein n=1 Tax=Pneumocystis sp. 'macacae' TaxID=2698480 RepID=A0A8H8A4N4_9ASCO)

HSP 1 Score: 61.2 bits (147), Expect = 1.380e-7
Identity = 50/136 (36.76%), Postives = 66/136 (48.53%), Query Frame = 0
Query:   93 GIDAEWSVWATGVRPVAVVQLSTIEGYTVVFHIKPNERRVGVFPKALKELLENGDVPLAGVTVGHDLTLIRNSYNVEGTGEEDLGQLATKHLGIGVGSRSLED---------LCATLLGQRLSKGNVRMSNWEQAL 219
            G D EW  +  G   VA++QLS      V+FH+       G+FP+ALK LLEN      GV V +D   +   + + G+G  +L QLA     + V S   E          L    LG+ L KGNVR SNW+Q L
Sbjct:   96 GFDMEWKPY--GDSKVAIIQLSDANSI-VLFHLSLMGLE-GIFPEALKGLLENPCYIKCGVGVRNDGYKLFKDFGIIGSGFLELSQLA-----MAVDSNKWESNTRLIGLTKLAEQYLGKPLFKGNVRFSNWDQEL 222          
BLAST of mRNA_A-nodosum_M_contig10948.3.1 vs. uniprot
Match: A0A1U7LXB9_NEOID (Werner syndrome ATP-dependent helicase n=1 Tax=Neolecta irregularis (strain DAH-3) TaxID=1198029 RepID=A0A1U7LXB9_NEOID)

HSP 1 Score: 60.8 bits (146), Expect = 2.820e-7
Identity = 46/139 (33.09%), Postives = 67/139 (48.20%), Query Frame = 0
Query:   91 VFGIDAEWS-VWATGVRPVAVVQLSTIEGYTVVFHIKPNERRVGVFPKALKELLENGDVPLAGVTVGHDLTLIRNSYNVEGTGEEDLGQLAT-----KHLGIGVGSRSLEDLCATLLGQRLSKGNVRMSNWEQALSDDQ 223
            V G D EW  V+     P   V L  +    V+  I+    ++  FP AL E++ N  +   GV +  D   + ++YNV   G  +L  LA      + +  G  + ++  LC   LG+ LSKG VR+SNW Q LS DQ
Sbjct:  207 VLGFDMEWPPVFRKSKTPNPKVSLIQLCDPNVILLIQVG--KMTAFPPALAEIIGNPRILKCGVAISGDGKRLLDAYNVTCRGLLELSNLAVSVDPERWVSNGARTIAMTKLCEIYLGKPLSKGPVRISNWNQNLSSDQ 343          
BLAST of mRNA_A-nodosum_M_contig10948.3.1 vs. uniprot
Match: UPI001455412D (exonuclease 3'-5' domain-containing protein 2-like isoform X1 n=2 Tax=Asterias rubens TaxID=7604 RepID=UPI001455412D)

HSP 1 Score: 60.8 bits (146), Expect = 3.240e-7
Identity = 42/131 (32.06%), Postives = 72/131 (54.96%), Query Frame = 0
Query:   91 VFGIDAEWSVWATGVR-PVAVVQLSTIEGYTVVFHIKPNERRVGVFPKALKELLENGDVPLAGVTVGHDLTLIRNSYNVEGTGEEDLGQLATKHLGIGVGSR---SLEDLCATLLGQRLSKG-NVRMSNWE 216
            V G+D EW    +G R P+A++QL+TI GY+V+  +   + R    P++L++LL N  +   GV V  D   +   +++   G  DL  +A++H+   + S+   SL++L    L + L K  +VR  +WE
Sbjct:   89 VIGLDCEWCSERSGKRRPIALLQLATISGYSVLIRLCKLDNRS--LPQSLRDLLANRSILKVGVAVLDDANHLLTDHHLPTRGCLDLRYVASRHMPRDLRSKFTGSLKNLADIFLNKTLDKSEDVRCGDWE 217          
BLAST of mRNA_A-nodosum_M_contig10948.3.1 vs. uniprot
Match: A0A7R9ETC7_9NEOP (Hypothetical protein n=1 Tax=Timema bartmani TaxID=61472 RepID=A0A7R9ETC7_9NEOP)

HSP 1 Score: 60.8 bits (146), Expect = 3.350e-7
Identity = 45/132 (34.09%), Postives = 62/132 (46.97%), Query Frame = 0
Query:   93 GIDAEWSVWATGVRPVAVVQLSTIEGYTVVFHIKPNERRVGVFPKALKELLENGDVPLAGVTVGHDLTLIRNSYNVEGTGEEDLGQLATKHLGIGVGSRSLEDLCATLLGQRLSKG-NVRMSNWEQALSDDQ 223
            G D EW       RPVA++QL++++G   ++ +     +V   P  LKELLE+  +   GV    D   +   Y V+  G  DL  LA  H   G  +  L  L  T LG +L K   VR S+WE    D Q
Sbjct:   79 GFDCEWVTERGSRRPVALLQLASLDGLCALYRLC----KVHYIPTQLKELLEDPSILKVGVAPSDDAKYLLADYGVKVRGCLDLRHLAKLH---GNSTGGLGSLAQTTLGVKLDKNWRVRCSDWEAQQLDAQ 203          
BLAST of mRNA_A-nodosum_M_contig10948.3.1 vs. uniprot
Match: UPI001E270C6F (exonuclease 3'-5' domain-containing protein 2 n=1 Tax=Melitaea cinxia TaxID=113334 RepID=UPI001E270C6F)

HSP 1 Score: 60.5 bits (145), Expect = 4.340e-7
Identity = 44/127 (34.65%), Postives = 63/127 (49.61%), Query Frame = 0
Query:   93 GIDAEWSVWATGVRPVAVVQLSTIEGYTVVFHIKPNERRVGVFPKALKELLENGDVPLAGVTVGHDLTLIRNSYNVEGTGEEDLGQLAT--KHLGIGVGSRSLEDLCATLLGQRLSKG-NVRMSNWE 216
            G D EW        PVA++QLST +GY  +F +      +   P  LK+LLE+GD+   GV+ G+D+  +   Y+V      D+  LA    +   G+GS     L   LLG  L K   +R S+WE
Sbjct:   72 GFDCEWVSDQGKKHPVALLQLSTNDGYCALFRLS----HLKSIPNCLKDLLEDGDIYKVGVSPGNDVKYLAKDYSVYTKSTLDIRHLAELCNYEPGGLGS-----LSKALLGIELDKSWRIRCSDWE 189          
BLAST of mRNA_A-nodosum_M_contig10948.3.1 vs. uniprot
Match: UPI001568D0F9 (exonuclease 3'-5' domain-containing protein 2 n=2 Tax=Maniola TaxID=111919 RepID=UPI001568D0F9)

HSP 1 Score: 60.5 bits (145), Expect = 4.350e-7
Identity = 54/175 (30.86%), Postives = 78/175 (44.57%), Query Frame = 0
Query:   51 SYKPIKIVVGSMDCDHTTLACTELLVSARRGASNVPGGVVVFGIDAEWSVWATGVRPVAVVQLSTIEGYTVVFHIKPNERRVGVFPKALKELLENGDVPLAGVTVGHDLTLIRNSYNVEGTGEEDLGQLATKHLGIGVGSRSLEDLCATLLGQRLSKG-NVRMSNWE-QALSDDQ 223
            +Y  I I+    DCD       + +   RR            G D EW       +PVA++QLST +GY  +F +     ++   PKAL++LL++  +   GV    D   +   Y V   G  D+  L   HL  G  S  L  L  +LLG  L K   +R S+WE + LS+ Q
Sbjct:   39 NYLTIDIISSEQDCD-------QAIDKLRRKCWEHHA----IGFDCEWVTEQGRRQPVALLQLSTFDGYCALFRLN----QIKTIPKALQDLLQDETIYKVGVAPKDDARYLSQDYGVYMEGTLDVRHLV--HL-CGYESGGLASLSKSLLGIVLDKTWRIRCSDWEAEQLSERQ 195          
BLAST of mRNA_A-nodosum_M_contig10948.3.1 vs. uniprot
Match: UPI001182338E (Uncharacterized protein n=2 Tax=Manduca sexta TaxID=7130 RepID=UPI001182338E)

HSP 1 Score: 60.1 bits (144), Expect = 5.860e-7
Identity = 51/128 (39.84%), Postives = 65/128 (50.78%), Query Frame = 0
Query:   93 GIDAEWSVWATGVR-PVAVVQLSTIEGYTVVFHIKPNERRVGVFPKALKELLENGDVPLAGVTVGHDLTLIRNSYNVEGTGEEDLGQLATKHLGIGVGSRSLEDLCATLLGQRLSKG-NVRMSNWEQA 218
            G D EW V   G R PVA+VQLS+I+G   +F +      +  FP +LKELLE+  V   GV    D   + + Y+V      D+  +A K  G+  G   L  L  TLLG  L K   VR SNWE A
Sbjct:   69 GFDCEW-VTEHGTRNPVALVQLSSIDGLCGLFRLNC----MTSFPTSLKELLEDETVYKVGVAAADDAKYLYSDYSVSLQSTLDIRHIA-KLCGLETGG--LAFLAKTLLGITLDKSWRVRCSNWEAA 188          
BLAST of mRNA_A-nodosum_M_contig10948.3.1 vs. uniprot
Match: UPI001C203DBA (exonuclease 3'-5' domain-containing protein 2 n=1 Tax=Aricia agestis TaxID=91739 RepID=UPI001C203DBA)

HSP 1 Score: 58.5 bits (140), Expect = 1.940e-6
Identity = 42/125 (33.60%), Postives = 64/125 (51.20%), Query Frame = 0
Query:   93 GIDAEWSVWATGVRPVAVVQLSTIEGYTVVFHIKPNERRVGVFPKALKELLENGDVPLAGVTVGHDLTLIRNSYNVEGTGEEDLGQLATKHLGIGVGSRSLEDLCATLLGQRLSKG-NVRMSNWE 216
            G D EW       +PVA++QLST +G+ ++F +     ++ +   +LKELLE+  +   GVT G+D   +++ Y+V      D+  L       G     L  L A+LLG  L K   VR S+WE
Sbjct:   74 GFDCEWVTDNGHRQPVALLQLSTYDGFCLLFRLN----KLKLITGSLKELLEDDSLYKVGVTPGNDAKYLQHDYSVTLKSSLDIRHLVDF---CGYDDGGLAALSASLLGVVLDKSWRVRCSDWE 191          
BLAST of mRNA_A-nodosum_M_contig10948.3.1 vs. uniprot
Match: A0A2H1VSX8_SPOFR (SFRICE_004621 n=3 Tax=Spodoptera TaxID=7106 RepID=A0A2H1VSX8_SPOFR)

HSP 1 Score: 58.2 bits (139), Expect = 2.620e-6
Identity = 55/175 (31.43%), Postives = 79/175 (45.14%), Query Frame = 0
Query:   51 SYKPIKIVVGSMDCDHTTLACTELLVSARRGASNVPGGVVVFGIDAEWSVWATGVRPVAVVQLSTIEGYTVVFHIKPNERRVGVFPKALKELLENGDVPLAGVTVGHDLTLIRNSYNVEGTGEEDLGQLATKHLGIGVGSRSLEDLCATLLGQRLSKG-NVRMSNWE-QALSDDQ 223
            +Y  +KIV     CD       EL    ++  +         G D EW       +PVA+VQLS+++GY  +F +      +   P +LKELLE+  +   GV    D   + N Y VE     D+  LA ++ G   G   L  L + LL   L K   VR S+WE + LS+ Q
Sbjct:   41 NYLTVKIVTTEESCDAVV---AELKKRCQKHRA--------LGFDCEWVTNNGKRQPVALVQLSSLDGYCGLFRLNT----LKTVPLSLKELLEDESIYKVGVGPKDDSKYLHNDYAVELRSSLDIRHLA-EYCGYEPGG--LASLSSVLLRATLDKSWRVRCSDWEAEELSERQ 197          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10948.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D7G0J2_ECTSI1.640e-3848.903'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A8H8A4N4_9ASCO1.380e-736.763'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A1U7LXB9_NEOID2.820e-733.09Werner syndrome ATP-dependent helicase n=1 Tax=Neo... [more]
UPI001455412D3.240e-732.06exonuclease 3'-5' domain-containing protein 2-like... [more]
A0A7R9ETC7_9NEOP3.350e-734.09Hypothetical protein n=1 Tax=Timema bartmani TaxID... [more]
UPI001E270C6F4.340e-734.65exonuclease 3'-5' domain-containing protein 2 n=1 ... [more]
UPI001568D0F94.350e-730.86exonuclease 3'-5' domain-containing protein 2 n=2 ... [more]
UPI001182338E5.860e-739.84Uncharacterized protein n=2 Tax=Manduca sexta TaxI... [more]
UPI001C203DBA1.940e-633.60exonuclease 3'-5' domain-containing protein 2 n=1 ... [more]
A0A2H1VSX8_SPOFR2.620e-631.43SFRICE_004621 n=3 Tax=Spodoptera TaxID=7106 RepID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 86..220
e-value: 4.6E-8
score: 33.0
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 53..223
e-value: 1.7E-25
score: 91.4
NoneNo IPR availablePANTHERPTHR136203-5 EXONUCLEASEcoord: 59..223
NoneNo IPR availablePANTHERPTHR13620:SF45POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 59..223
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 88..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10948contigA-nodosum_M_contig10948:12120..12947 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10948.3.1mRNA_A-nodosum_M_contig10948.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig10948 12120..13109 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig10948.3.1 ID=prot_A-nodosum_M_contig10948.3.1|Name=mRNA_A-nodosum_M_contig10948.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=223bp
MKKSRCKLCICSFSQGAEVVFLTTSPCTVNTTAPLPPATRDSLPHVALPH
SYKPIKIVVGSMDCDHTTLACTELLVSARRGASNVPGGVVVFGIDAEWSV
WATGVRPVAVVQLSTIEGYTVVFHIKPNERRVGVFPKALKELLENGDVPL
AGVTVGHDLTLIRNSYNVEGTGEEDLGQLATKHLGIGVGSRSLEDLCATL
LGQRLSKGNVRMSNWEQALSDDQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0025623'-5'_exonuclease_dom
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf