prot_A-nodosum_M_contig10944.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig10944.2.1
Unique Nameprot_A-nodosum_M_contig10944.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length71
Homology
BLAST of mRNA_A-nodosum_M_contig10944.2.1 vs. uniprot
Match: A0A1E7F0G0_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F0G0_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.490e-16
Identity = 35/52 (67.31%), Postives = 40/52 (76.92%), Query Frame = 0
Query:   19 GVSRHSDKHAPRDFPEAQGAFKVLMIHWILQVARRIAFRCVLHRSGSQDIRR 70
            G+ RHSDKHA    P+AQ AFK+LMIH +LQ A RIAFRCVLHR G+ DI R
Sbjct:    3 GIHRHSDKHATGKIPKAQCAFKILMIHEVLQFALRIAFRCVLHRCGNLDIHR 54          
BLAST of mRNA_A-nodosum_M_contig10944.2.1 vs. uniprot
Match: B8CEF4_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CEF4_THAPS)

HSP 1 Score: 73.6 bits (179), Expect = 1.140e-15
Identity = 36/50 (72.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:   19 GVSRHSDKHAPRDFPEAQGAFKVLMIHWILQVARRIAFRCVLHRSGSQDI 68
            GVS HSDKHA   +P+AQ AFK LMIH +LQ A RIAFRCVLHR G QDI
Sbjct:   28 GVSGHSDKHALGHYPKAQCAFKSLMIHEVLQFALRIAFRCVLHRCGIQDI 77          
BLAST of mRNA_A-nodosum_M_contig10944.2.1 vs. uniprot
Match: K0S3C5_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S3C5_THAOC)

HSP 1 Score: 72.8 bits (177), Expect = 1.920e-15
Identity = 37/68 (54.41%), Postives = 46/68 (67.65%), Query Frame = 0
Query:    1 TLIVRQTPPTGGRRRLAIGVSRHSDKHAPRDFPEAQGAFKVLMIHWILQVARRIAFRCVLHRSGSQDI 68
            T+ V+ TP     ++   GV  HSDKHA  ++P+AQ AFK+LMIH +LQ   RIA RCVLHR G QDI
Sbjct:    3 TVTVQLTPAVLQPQQWLSGVQGHSDKHALGNYPKAQCAFKILMIHEVLQFVLRIAVRCVLHRCGIQDI 70          
BLAST of mRNA_A-nodosum_M_contig10944.2.1 vs. uniprot
Match: A0A524MI88_9PROT (Uncharacterized protein n=1 Tax=Nitrosomonadales bacterium TaxID=2026761 RepID=A0A524MI88_9PROT)

HSP 1 Score: 71.2 bits (173), Expect = 2.590e-14
Identity = 34/52 (65.38%), Postives = 38/52 (73.08%), Query Frame = 0
Query:   19 GVSRHSDKHAPRDFPEAQGAFKVLMIHWILQVARRIAFRCVLHRSGSQDIRR 70
            GV  HS +HA    PEAQ AFK+LMIH +LQ A RIAFRCVLHR G+ DI R
Sbjct:   68 GVHEHSTRHATGHIPEAQCAFKILMIHEVLQFALRIAFRCVLHRCGNLDIHR 119          
BLAST of mRNA_A-nodosum_M_contig10944.2.1 vs. uniprot
Match: D8UMG8_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UMG8_VOLCA)

HSP 1 Score: 53.9 bits (128), Expect = 5.440e-8
Identity = 27/37 (72.97%), Postives = 28/37 (75.68%), Query Frame = 0
Query:   33 PEAQGAFKVLMIHWILQVARRIAFRCVLHRSGSQDIR 69
            P+AQ AFK  MIH  LQ   RIAFRCVLHRS SQDIR
Sbjct:   35 PQAQFAFKDSMIHVFLQFTLRIAFRCVLHRSESQDIR 71          
BLAST of mRNA_A-nodosum_M_contig10944.2.1 vs. uniprot
Match: A9U5J8_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9U5J8_PHYPA)

HSP 1 Score: 56.2 bits (134), Expect = 9.130e-8
Identity = 29/41 (70.73%), Postives = 29/41 (70.73%), Query Frame = 0
Query:   29 PRDFPEAQGAFKVLMIHWILQVARRIAFRCVLHRSGSQDIR 69
            P D P AQ AFK  MIH ILQ   RIAFRCVLHR  SQDIR
Sbjct:  179 PSDEPRAQLAFKNSMIHGILQFTLRIAFRCVLHRCKSQDIR 219          
BLAST of mRNA_A-nodosum_M_contig10944.2.1 vs. uniprot
Match: A0A4S8JRQ4_MUSBA (Uncharacterized protein n=2 Tax=Musa balbisiana TaxID=52838 RepID=A0A4S8JRQ4_MUSBA)

HSP 1 Score: 49.3 bits (116), Expect = 2.450e-5
Identity = 34/74 (45.95%), Postives = 38/74 (51.35%), Query Frame = 0
Query:    2 LIVRQTPPTGGRRRLAIGVSRHSDKHAPRD------FPEAQGAFKVLMIHWILQVARRIAFRCVLHRSGSQDIR 69
            L  R  PP GG RR    V+       PR       +P AQ AFK  M+H ILQ    IAFR VLHR  S+DIR
Sbjct:   53 LRTRLHPPRGGHRRSVESVT-------PRQACPVAGWPRAQLAFKDSMVHGILQFTPGIAFRYVLHRCESRDIR 119          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10944.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A1E7F0G0_9STRA1.490e-1667.31Uncharacterized protein (Fragment) n=2 Tax=Fragila... [more]
B8CEF4_THAPS1.140e-1572.00Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
K0S3C5_THAOC1.920e-1554.41Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A524MI88_9PROT2.590e-1465.38Uncharacterized protein n=1 Tax=Nitrosomonadales b... [more]
D8UMG8_VOLCA5.440e-872.97Uncharacterized protein n=1 Tax=Volvox carteri f. ... [more]
A9U5J8_PHYPA9.130e-870.73Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A4S8JRQ4_MUSBA2.450e-545.95Uncharacterized protein n=2 Tax=Musa balbisiana Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10944contigA-nodosum_M_contig10944:3754..3966 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10944.2.1mRNA_A-nodosum_M_contig10944.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig10944 3754..3966 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig10944.2.1 ID=prot_A-nodosum_M_contig10944.2.1|Name=mRNA_A-nodosum_M_contig10944.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=71bp
TLIVRQTPPTGGRRRLAIGVSRHSDKHAPRDFPEAQGAFKVLMIHWILQV
ARRIAFRCVLHRSGSQDIRR*
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