prot_A-nodosum_M_contig10904.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig10904.4.1
Unique Nameprot_A-nodosum_M_contig10904.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length110
Homology
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BLAST of mRNA_A-nodosum_M_contig10904.4.1 vs. uniprot
Match: A0A6H5L6P2_9PHAE (AB hydrolase-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6P2_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 5.050e-14
Identity = 36/61 (59.02%), Postives = 47/61 (77.05%), Query Frame = 0 
Query:   49 NALAPSAVDEAETVLECLSSLLPALEEASRMAAKLPECSNTHDFDRARQVLLTFGIGGNDR 109
            N LAPSA+ EAE++LECL+ L+P LEEA  +A +L +CS+T DFDR+RQ LL  G+  NDR
Sbjct:  220 NTLAPSALAEAESLLECLAELMPTLEEAFGLADELSQCSSTQDFDRSRQTLLVPGVRNNDR 280
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10904.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L6P2_9PHAE5.050e-1459.02AB hydrolase-1 domain-containing protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10904contigA-nodosum_M_contig10904:10490..12818 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10904.4.1mRNA_A-nodosum_M_contig10904.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig10904 10470..12818 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig10904.4.1 ID=prot_A-nodosum_M_contig10904.4.1|Name=mRNA_A-nodosum_M_contig10904.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=110bp
MLTRALEELISRAKATAGEAAGRGRVAGALANPAAAAAAAAVAAAAGPNA
LAPSAVDEAETVLECLSSLLPALEEASRMAAKLPECSNTHDFDRARQVLL
TFGIGGNDR*
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