prot_A-nodosum_M_contig1090.6.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1090.6.2
Unique Nameprot_A-nodosum_M_contig1090.6.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length629
Homology
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BLAST of mRNA_A-nodosum_M_contig1090.6.2 vs. uniprot
Match: D8LGU1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGU1_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 3.490e-14
Identity = 54/138 (39.13%), Postives = 62/138 (44.93%), Query Frame = 0 
Query:  117 MVVSEALYGFYSSEICLHFLHALAAYFIRVAKDYIVAASGVERQQGSRNRRSGTLMPPASPPRSEQGNGHGADPASEDEATFERASLLREVGRSYARVVIYCSNFERTSADALFFESLLHLARRVVATAVSEPSLELE 254
            MVV+E LYGFY++EI LHFLHAL                                                                   VGRSY RV++YCSNFERT+ADALFFESLL LAR VVA AV+E +L  E
Sbjct:    1 MVVAEPLYGFYNTEINLHFLHAL-------------------------------------------------------------------VGRSYGRVIMYCSNFERTTADALFFESLLCLARLVVAAAVAESTLSPE 71
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BLAST of mRNA_A-nodosum_M_contig1090.6.2 vs. uniprot
Match: W4GMZ3_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GMZ3_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.270e-5
Identity = 34/95 (35.79%), Postives = 51/95 (53.68%), Query Frame = 0 
Query:  196 ATFERASLLREVGRSYARVVIYCSNFERTSADALFFESLLHLARRVVATAVSEPSLELELDTEFDRILRGEVF---GRAILRPPPQPAPTRCRTM 287
            A    +  +  + +SY+R+V++CSNFER   D  FFE++ +    +V T   + S  L L+ E     RGEVF   G++ LRPP  P P +   M
Sbjct:  181 AVSSHSDSVANLAKSYSRLVLHCSNFERHEEDRTFFEAVYYFVCAIVKTNHPQDSWPL-LEEELGYAFRGEVFNANGKSNLRPPVVPEPAKAPAM 274
[Close]
BLAST of mRNA_A-nodosum_M_contig1090.6.2 vs. uniprot
Match: W4GM11_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GM11_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.470e-5
Identity = 34/95 (35.79%), Postives = 51/95 (53.68%), Query Frame = 0 
Query:  196 ATFERASLLREVGRSYARVVIYCSNFERTSADALFFESLLHLARRVVATAVSEPSLELELDTEFDRILRGEVF---GRAILRPPPQPAPTRCRTM 287
            A    +  +  + +SY+R+V++CSNFER   D  FFE++ +    +V T   + S  L L+ E     RGEVF   G++ LRPP  P P +   M
Sbjct:  181 AVSSHSDSVANLAKSYSRLVLHCSNFERHEEDRTFFEAVYYFVCAIVKTNHPQDSWPL-LEEELGYAFRGEVFNANGKSNLRPPVVPEPAKAPAM 274
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1090.6.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LGU1_ECTSI3.490e-1439.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W4GMZ3_9STRA1.270e-535.79Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
W4GM11_9STRA1.470e-535.79Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 325..383
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 325..341
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 423..449

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1090contigA-nodosum_M_contig1090:49427..69259 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1090.6.2mRNA_A-nodosum_M_contig1090.6.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1090 49097..69425 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1090.6.2 ID=prot_A-nodosum_M_contig1090.6.2|Name=mRNA_A-nodosum_M_contig1090.6.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=629bp
MEDTVAHEAAKEPLPGQRGGLNPNDVIIDAHTSPRPVSILTPFPAWELPR
INEARGEGKARLSRTTHALGRAPPVSSPLNSAAPSTQTPQRSMRFNLRDG
VKESIKAMRERVEAKEMVVSEALYGFYSSEICLHFLHALAAYFIRVAKDY
IVAASGVERQQGSRNRRSGTLMPPASPPRSEQGNGHGADPASEDEATFER
ASLLREVGRSYARVVIYCSNFERTSADALFFESLLHLARRVVATAVSEPS
LELELDTEFDRILRGEVFGRAILRPPPQPAPTRCRTMGCSTRRYKPGHDN
QTFRTDDRRQASFWIEGFRAGLKNSVTPASTSSTQVGTSRSIKRPAPRGG
RALVPTKRPSARAPGRRTATPGRSDDGNGNSNVVRICRKDKFTNGRPSRG
LSPARCFDSNDVLPSSLFSPPVGPAVRAGGNQHPLAAKHSRGEEMEGRDA
STNGVGLNWVREKTDEDGRREPSEVLLPRFDELSRWRFSRGTIPKMVRMV
FEVERVALSNLKQAESYRKSLAAKFHREKAAPNRGFVEGMSGAEDGRSET
PSKPQEIFNHHGTGAIAKQCSTDSSTRRASSWRRRGRVLTFGQRSHGRGA
CDDIGGRHVFNAETISVCIASIVERDFT*
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