prot_A-nodosum_M_contig109.7.4 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_A-nodosum_M_contig109.7.4
Unique Name	prot_A-nodosum_M_contig109.7.4
Type	polypeptide
Organism	Ascophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length	302

Homology

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BLAST of mRNA_A-nodosum_M_contig109.7.4 vs. uniprot
Match: A0A6H5KCA8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCA8_9PHAE)

HSP 1 Score: 365 bits (937), Expect = 4.860e-122
Identity = 173/304 (56.91%), Postives = 218/304 (71.71%), Query Frame = 0

Query:    2 LLGKIFPSESILPTSHPSMGLRLAGLTGHDEKWWEPIKVMYSHNRPNVTDAIGLPPTKQPRLLYVIRNPVLHKASIYFESVCRFGRHIKADGKIDQEDATLVRMESDPM----YSFCRDAAAWLDSPMFFKVYRNMQTKWLSYGSAKRHPCIEKNPELSLWNANGGAEIEGVDCVDLKAKGRDEEIWEEYFSRTADAAIKRLERGMWVGVTERMEEAVCLLLFTLGKAWYPLGNLRHKEPRPISVWSEAAIAKVDRTDRADWRLFDAANEILDLRLWTARERLEHTDQEERERLGQ-CFDVLAG 300
            LL  +FP  +++PTSHPS GLR+  L GHD +WW+P ++M+SHNR NVTD IG+PPTK PR+L  IRNP+LHKASI+FESVCRFG+HI  +G IDQE ATL R+    +    Y+FCRD   W+ S  F KVYRN + +WLSYG+A+ HPCI  +PE + W  +   ++ G  C  +KA G+D ++W  YF RTADAAI+R+E  +WVGVTERMEE++CLL  TLGK    +   R K PRPI+VW E A  K    DRADWR+F+AAN+ LDLRLWTARERL+   +EER RLG  CF VLAG
Sbjct:  124 LLANVFPRTALVPTSHPSKGLRVNHLQGHDSEWWKPFQLMFSHNRANVTDTIGIPPTKTPRVLITIRNPLLHKASIFFESVCRFGQHISDNGTIDQEAATLARVNGKGVETEQYNFCRDPEMWVGSKQFDKVYRNFEARWLSYGAAEGHPCIRPDPEFNRWRVDD-TDVGGT-CKAIKASGQDADVWAAYFERTADAAIRRMEGALWVGVTERMEESLCLLFLTLGKKESEMPQHRLKTPRPITVWHEKAKEKAASYDRADWRVFEAANDFLDLRLWTARERLKSAGEEERARLGDHCFQVLAG 425

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BLAST of mRNA_A-nodosum_M_contig109.7.4 vs. uniprot
Match: D8LDK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDK9_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 1.960e-47
Identity = 84/163 (51.53%), Postives = 113/163 (69.33%), Query Frame = 0

Query:  139 SYGSAKRHPCIEKNPELSLWNANGGAEIEGVDCVDLKAKGRDEEIWEEYFSRTADAAIKRLERGMWVGVTERMEEAVCLLLFTLGKAWYPLGNLRHKEPRPISVWSEAAIAKVDRTDRADWRLFDAANEILDLRLWTARERLEHTDQEERERLGQ-CFDVLAG 300
            ++    +H C+  +  +      GG   +   C  LKA G+   I EEY+ R A++AIKRL  G+WVGVTER +EA CLL  TLGK    +G+ RHKEPRPISVW EAA++KV + D+ADW++F+AAN+ILDLR+WTARERL+H  +EE ERLG+ C +V+ G
Sbjct:  126 AHNEEDKHRCVYGHAWVKP--EKGGDHHDEESCNSLKASGKHNAILEEYYDRMAESAIKRLGDGLWVGVTERSDEADCLLFLTLGKGSTGMGSYRHKEPRPISVWHEAAMSKVTQYDQADWKVFNAANDILDLRIWTARERLKHAGEEELERLGKHCVNVING 286

The following BLAST results are available for this feature:

BLAST of mRNA_A-nodosum_M_contig109.7.4 vs. uniprot

BLAST of mRNA_A-nodosum_M_contig109.7.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KCA8_9PHAE	4.860e-122	56.91	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
D8LDK9_ECTSI	1.960e-47	51.53	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 23..291 e-value: 1.8E-6 score: 29.4

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
A-nodosum_M_contig109	contig	A-nodosum_M_contig109:604710..611625 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ascophyllum nodosum dioecious OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_A-nodosum_M_contig109.7.4	mRNA_A-nodosum_M_contig109.7.4	Ascophyllum nodosum dioecious	mRNA	A-nodosum_M_contig109 603318..612101 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_A-nodosum_M_contig109.7.4 ID=prot_A-nodosum_M_contig109.7.4|Name=mRNA_A-nodosum_M_contig109.7.4|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=302bp
MLLGKIFPSESILPTSHPSMGLRLAGLTGHDEKWWEPIKVMYSHNRPNVT
DAIGLPPTKQPRLLYVIRNPVLHKASIYFESVCRFGRHIKADGKIDQEDA
TLVRMESDPMYSFCRDAAAWLDSPMFFKVYRNMQTKWLSYGSAKRHPCIE
KNPELSLWNANGGAEIEGVDCVDLKAKGRDEEIWEEYFSRTADAAIKRLE
RGMWVGVTERMEEAVCLLLFTLGKAWYPLGNLRHKEPRPISVWSEAAIAK
VDRTDRADWRLFDAANEILDLRLWTARERLEHTDQEERERLGQCFDVLAG
A*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase