prot_A-nodosum_M_contig10846.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig10846.1.1
Unique Nameprot_A-nodosum_M_contig10846.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length194
Homology
BLAST of mRNA_A-nodosum_M_contig10846.1.1 vs. uniprot
Match: A0A6H5JLS1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLS1_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 1.100e-31
Identity = 67/179 (37.43%), Postives = 104/179 (58.10%), Query Frame = 0
Query:    1 MVLGIAAVKDWELRQLDVDMAYLEVGVTEELYIELPEDYRESCDQVGRLQKAMYGLVHAGLLWSKMFSSELAAREFEQCQADPCVFRRVLRGKVVVIIVVYVDDLLVASETKRDEEQAIKDLRSCFPIKDVREAEFYLGCRITRDRNAGTLNVDQHHYVRTVASKFNDEKTSTTPVVAG 179
            ++L +A  K   L   DV  AY    + EE+++ LP    +   ++G+ ++A+YGL  +G  W    +  L    FEQC+ADPCVFR+++   VV+IIV+YVDD+LVA E+  D E+ +  L+  FP K++ E E++  C I RD  AGTL + Q  Y+  +  +F+ + TS  P   G
Sbjct:  258 LMLAVANEKGMNLNHWDVKQAYTHATLDEEIFLRLPAGCGDKSHKIGKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDMLVA-ESDEDCEELLASLKKKFPTKNLGECEWFHRCAIERDVEAGTLKISQTTYIDNMVKRFDVQSTSRIPASPG 435          
BLAST of mRNA_A-nodosum_M_contig10846.1.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM)

HSP 1 Score: 129 bits (323), Expect = 5.070e-31
Identity = 59/179 (32.96%), Postives = 107/179 (59.78%), Query Frame = 0
Query:    3 LGIAAVKDWELRQLDVDMAYLEVGVTEELYIELPEDYRESCDQVGRLQKAMYGLVHAGLLWSKMFSSELAAREFEQCQADPCVFRRVLRGKVVVIIVVYVDDLLVASETKRDEEQAIKDLRSCFPIKDVREAEFYLGCRITRDRNAGTLNVDQHHYVRTVASKFNDEKTSTTPVVAGEN 181
            + ++A+KDWE+RQ+D+  AYL   + EE+++E PE + +   +V RL+  +YGL  AG +W+K  +++L    F +  ADPCV+     GK+  I+ V+VDD+++  +++   +  +  L+  F +KD+ E +  LG +I R+R   T+ + Q +Y+ T+  +FN  K +  P+    N
Sbjct:  952 IALSAIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKIT-ILTVWVDDIILCGDSESRIDTTVSALKKIFEVKDLGEPKLLLGIQIIRNRKLKTITISQRNYINTILERFNYSKINPIPIPLDPN 1129          
BLAST of mRNA_A-nodosum_M_contig10846.1.1 vs. uniprot
Match: A0A284R853_ARMOS (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284R853_ARMOS)

HSP 1 Score: 126 bits (317), Expect = 7.380e-31
Identity = 66/164 (40.24%), Postives = 102/164 (62.20%), Query Frame = 0
Query:    3 LGIAAVKDWELRQLDVDMAYLEVGVTEELYIELPEDYRESCDQVGRLQKAMYGLVHAGLLWSKMFSSELAAREFEQCQADPCVFRRVLRGKVVVIIVVYVDDLLVASETKRDEEQAIKDLRSCFPIKDVREAEFYLGCRITRDRNAGTLNVDQHHYVRTVASKF 166
            LGIAA+KD E+ Q+DV  AYL   + EE+Y+  PE Y +   +V RL+K +YGL  +G  W+  F  +L +  F + +AD CV++R+  G++  II V+VDDLL+ SET  D  +   +L + F +KD+ E +  +G  I RDR  GT+++ Q  Y+  V ++F
Sbjct:   69 LGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGCEWNWEFDRKLTSIGFSKLEADHCVYKRIREGRMT-IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRF 231          
BLAST of mRNA_A-nodosum_M_contig10846.1.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 128 bits (321), Expect = 9.420e-31
Identity = 66/164 (40.24%), Postives = 103/164 (62.80%), Query Frame = 0
Query:    3 LGIAAVKDWELRQLDVDMAYLEVGVTEELYIELPEDYRESCDQVGRLQKAMYGLVHAGLLWSKMFSSELAAREFEQCQADPCVFRRVLRGKVVVIIVVYVDDLLVASETKRDEEQAIKDLRSCFPIKDVREAEFYLGCRITRDRNAGTLNVDQHHYVRTVASKF 166
            LGIAA+KD E+ Q+DV  AYL   + EE+Y+  PE Y +   +V RL+K +YGL  +G  W++ F  +L +  F + +AD CV++R+  G++  II V+VDDLL+ SET  D  +   +L + F +KD+ E +  +G  I RDR  GT+++ Q  Y+  V ++F
Sbjct:  976 LGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMT-IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRF 1138          
BLAST of mRNA_A-nodosum_M_contig10846.1.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 1.190e-30
Identity = 65/179 (36.31%), Postives = 105/179 (58.66%), Query Frame = 0
Query:    1 MVLGIAAVKDWELRQLDVDMAYLEVGVTEELYIELPEDYRESCDQVGRLQKAMYGLVHAGLLWSKMFSSELAAREFEQCQADPCVFRRVLRGKVVVIIVVYVDDLLVASETKRDEEQAIKDLRSCFPIKDVREAEFYLGCRITRDRNAGTLNVDQHHYVRTVASKFNDEKTSTTPVVAG 179
            ++L +A  K   L   DV  AY    + EE++++LP    +   ++ + ++A+YGL  +G  W    +  L    FEQC+ADPCVFR+++   VV+IIV+YVDD+LVA   + D E+ +  L   FP K++ E +++ GC I RD +AGTL + Q  Y+ ++  +F+ + TS  P   G
Sbjct:  424 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPG 601          
BLAST of mRNA_A-nodosum_M_contig10846.1.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 1.730e-30
Identity = 65/179 (36.31%), Postives = 104/179 (58.10%), Query Frame = 0
Query:    1 MVLGIAAVKDWELRQLDVDMAYLEVGVTEELYIELPEDYRESCDQVGRLQKAMYGLVHAGLLWSKMFSSELAAREFEQCQADPCVFRRVLRGKVVVIIVVYVDDLLVASETKRDEEQAIKDLRSCFPIKDVREAEFYLGCRITRDRNAGTLNVDQHHYVRTVASKFNDEKTSTTPVVAG 179
            ++L +A  K   L   DV  AY    + EE++++LP    +   ++ + ++A+YGL  +G  W    +  L    FEQC+ADPCVFR+++   VV+IIV+YVDD+LVA   + D E+ +  L   FP K++ E +++ GC I RD  AGTL + Q  Y+ ++  +F+ + TS  P   G
Sbjct:  833 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPG 1010          
BLAST of mRNA_A-nodosum_M_contig10846.1.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 1.770e-30
Identity = 65/179 (36.31%), Postives = 104/179 (58.10%), Query Frame = 0
Query:    1 MVLGIAAVKDWELRQLDVDMAYLEVGVTEELYIELPEDYRESCDQVGRLQKAMYGLVHAGLLWSKMFSSELAAREFEQCQADPCVFRRVLRGKVVVIIVVYVDDLLVASETKRDEEQAIKDLRSCFPIKDVREAEFYLGCRITRDRNAGTLNVDQHHYVRTVASKFNDEKTSTTPVVAG 179
            ++L +A  K   L   DV  AY    + EE++++LP    +   ++ + ++A+YGL  +G  W    +  L    FEQC+ADPCVFR+++   VV+IIV+YVDD+LVA   + D E+ +  L   FP K++ E +++ GC I RD  AGTL + Q  Y+ ++  +F+ + TS  P   G
Sbjct: 1212 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPG 1389          
BLAST of mRNA_A-nodosum_M_contig10846.1.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 1.780e-30
Identity = 65/179 (36.31%), Postives = 104/179 (58.10%), Query Frame = 0
Query:    1 MVLGIAAVKDWELRQLDVDMAYLEVGVTEELYIELPEDYRESCDQVGRLQKAMYGLVHAGLLWSKMFSSELAAREFEQCQADPCVFRRVLRGKVVVIIVVYVDDLLVASETKRDEEQAIKDLRSCFPIKDVREAEFYLGCRITRDRNAGTLNVDQHHYVRTVASKFNDEKTSTTPVVAG 179
            ++L +A  K   L   DV  AY    + EE++++LP    +   ++ + ++A+YGL  +G  W    +  L    FEQC+ADPCVFR+++   VV+IIV+YVDD+LVA   + D E+ +  L   FP K++ E +++ GC I RD  AGTL + Q  Y+ ++  +F+ + TS  P   G
Sbjct: 1232 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPG 1409          
BLAST of mRNA_A-nodosum_M_contig10846.1.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 1.790e-30
Identity = 65/179 (36.31%), Postives = 104/179 (58.10%), Query Frame = 0
Query:    1 MVLGIAAVKDWELRQLDVDMAYLEVGVTEELYIELPEDYRESCDQVGRLQKAMYGLVHAGLLWSKMFSSELAAREFEQCQADPCVFRRVLRGKVVVIIVVYVDDLLVASETKRDEEQAIKDLRSCFPIKDVREAEFYLGCRITRDRNAGTLNVDQHHYVRTVASKFNDEKTSTTPVVAG 179
            ++L +A  K   L   DV  AY    + EE++++LP    +   ++ + ++A+YGL  +G  W    +  L    FEQC+ADPCVFR+++   VV+IIV+YVDD+LVA   + D E+ +  L   FP K++ E +++ GC I RD  AGTL + Q  Y+ ++  +F+ + TS  P   G
Sbjct: 1375 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPG 1552          
BLAST of mRNA_A-nodosum_M_contig10846.1.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 3.990e-30
Identity = 64/179 (35.75%), Postives = 103/179 (57.54%), Query Frame = 0
Query:    1 MVLGIAAVKDWELRQLDVDMAYLEVGVTEELYIELPEDYRESCDQVGRLQKAMYGLVHAGLLWSKMFSSELAAREFEQCQADPCVFRRVLRGKVVVIIVVYVDDLLVASETKRDEEQAIKDLRSCFPIKDVREAEFYLGCRITRDRNAGTLNVDQHHYVRTVASKFNDEKTSTTPVVAG 179
            ++L +A  K   L   DV  AY    + EE++++LP    +   ++ + ++A+YGL  +G  W    +  L    FEQC+ADPCVFR+++   VV+IIV+YVDD+LVA   + D E+ +  L   FP K++ E +++ GC I RD   GTL + Q  Y+ ++  +F+ + TS  P   G
Sbjct:  387 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPG 564          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10846.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLS1_9PHAE1.100e-3137.43Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0C3AKI0_9AGAM5.070e-3132.96Uncharacterized protein (Fragment) n=1 Tax=Serendi... [more]
A0A284R853_ARMOS7.380e-3140.24Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A284QR88_ARMOS9.420e-3140.24Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
A0A6H5JQN6_9PHAE1.190e-3036.31Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KSG8_9PHAE1.730e-3036.31Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE1.770e-3036.31Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE1.780e-3036.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE1.790e-3036.31Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5JC10_9PHAE3.990e-3035.75Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..176
e-value: 1.1E-29
score: 103.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..194
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 1..172
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 10..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10846contigA-nodosum_M_contig10846:9388..9969 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10846.1.1mRNA_A-nodosum_M_contig10846.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig10846 9388..9978 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig10846.1.1 ID=prot_A-nodosum_M_contig10846.1.1|Name=mRNA_A-nodosum_M_contig10846.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=194bp
MVLGIAAVKDWELRQLDVDMAYLEVGVTEELYIELPEDYRESCDQVGRLQ
KAMYGLVHAGLLWSKMFSSELAAREFEQCQADPCVFRRVLRGKVVVIIVV
YVDDLLVASETKRDEEQAIKDLRSCFPIKDVREAEFYLGCRITRDRNAGT
LNVDQHHYVRTVASKFNDEKTSTTPVVAGENPLPRTVPHRPRRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR043502DNA/RNA_pol_sf