prot_A-nodosum_M_contig1083.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_A-nodosum_M_contig1083.4.1
Unique Name	prot_A-nodosum_M_contig1083.4.1
Type	polypeptide
Organism	Ascophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length	89

Homology

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BLAST of mRNA_A-nodosum_M_contig1083.4.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 1.390e-21
Identity = 43/88 (48.86%), Postives = 68/88 (77.27%), Query Frame = 0

Query:    1 MNQTAYAENLVAQYEISATSKIPGSPGVDLGPRKDGEPGGKDEFSLYQPLVGSLMWLSVMTRPDIVNALRACARHSHNPSPRHWKALL 88
            ++QTAY +++V ++++ +TS IP SPGVD+GP++D E GG  E+ + +  +GS+MW+S  +RPDI  A+RA ARH+H P+ RHWKA++
Sbjct:  247 ISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDDESGG--EWPVREA-IGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIV 331

[Close]

BLAST of mRNA_A-nodosum_M_contig1083.4.1 vs. uniprot
Match: A0A6H5K123_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K123_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 2.620e-21
Identity = 41/87 (47.13%), Postives = 66/87 (75.86%), Query Frame = 0

Query:    1 MNQTAYAENLVAQYEISATSKIPGSPGVDLGPRKDGEPGGKDEFSLYQPLVGSLMWLSVMTRPDIVNALRACARHSHNPSPRHWKAL 87
            +++TAY +++V ++++ +TS+IP SPG+DLGPR+D E GG  E+ + +  +GS+MW+S  +RPD+  A RA ARH+H P+ RHW A+
Sbjct:   64 ISETAYIDSMVKRFDVQSTSRIPASPGIDLGPRRDDEKGG--EWPVREA-IGSMMWVSAFSRPDVSFAARAVARHAHAPARRHWDAI 147

[Close]

BLAST of mRNA_A-nodosum_M_contig1083.4.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 5.270e-21
Identity = 42/87 (48.28%), Postives = 67/87 (77.01%), Query Frame = 0

Query:    1 MNQTAYAENLVAQYEISATSKIPGSPGVDLGPRKDGEPGGKDEFSLYQPLVGSLMWLSVMTRPDIVNALRACARHSHNPSPRHWKAL 87
            ++QTAY +++V ++++ +TS+IP SPGVDLGP++D E GG  E+ + +  +GS+MW+S  +RPD+  A+RA ARH+H P+ RHW A+
Sbjct:  538 ISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDDEKGG--EWPVREA-IGSIMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAI 621

[Close]

BLAST of mRNA_A-nodosum_M_contig1083.4.1 vs. uniprot
Match: A0A6H5JBN2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBN2_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 5.300e-21
Identity = 42/87 (48.28%), Postives = 67/87 (77.01%), Query Frame = 0

Query:    1 MNQTAYAENLVAQYEISATSKIPGSPGVDLGPRKDGEPGGKDEFSLYQPLVGSLMWLSVMTRPDIVNALRACARHSHNPSPRHWKAL 87
            ++QTAY +++V ++++ +TS+IP SPGVDLGP++D E GG  E+ + +  +GS+MW+S  +RPD+  A+RA ARH+H P+ RHW A+
Sbjct:  714 ISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDNENGG--EWPVREA-IGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAI 797

[Close]

BLAST of mRNA_A-nodosum_M_contig1083.4.1 vs. uniprot
Match: A0A6H5KBH1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBH1_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 6.130e-21
Identity = 39/87 (44.83%), Postives = 66/87 (75.86%), Query Frame = 0

Query:    1 MNQTAYAENLVAQYEISATSKIPGSPGVDLGPRKDGEPGGKDEFSLYQPLVGSLMWLSVMTRPDIVNALRACARHSHNPSPRHWKAL 87
            ++QTAY +++V ++++ +TS+IP +PG DLGP+++ E GG  E+ + +  +GS+MW+S  +RPD+  A+RA ARH+H P+ RHW A+
Sbjct:   64 ISQTAYIDSMVERFDVQSTSRIPATPGADLGPKREDEEGG--EWPVREA-IGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAI 147

[Close]

BLAST of mRNA_A-nodosum_M_contig1083.4.1 vs. uniprot
Match: A0A6H5KPT0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPT0_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 1.700e-20
Identity = 39/87 (44.83%), Postives = 66/87 (75.86%), Query Frame = 0

Query:    1 MNQTAYAENLVAQYEISATSKIPGSPGVDLGPRKDGEPGGKDEFSLYQPLVGSLMWLSVMTRPDIVNALRACARHSHNPSPRHWKAL 87
            ++QTAY +++V ++++ +TS+IP +PG DLGP+++ E GG  E+ + +  +GS+MW+S  +RPD+  A+RA ARH+H P+ RHW A+
Sbjct:   64 ISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGG--EWPVREA-IGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAI 147

[Close]

BLAST of mRNA_A-nodosum_M_contig1083.4.1 vs. uniprot
Match: A0A6H5KYH9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH9_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 1.840e-20
Identity = 41/87 (47.13%), Postives = 66/87 (75.86%), Query Frame = 0

Query:    1 MNQTAYAENLVAQYEISATSKIPGSPGVDLGPRKDGEPGGKDEFSLYQPLVGSLMWLSVMTRPDIVNALRACARHSHNPSPRHWKAL 87
            ++QTAY +++V ++++ + S+IP SPGVDLGP++D E GG  E+ + +  +GS+MW+S  +RPD+  A+RA ARH+H P+ RHW A+
Sbjct:  697 ISQTAYVDSMVKRFDVQSASRIPASPGVDLGPKRDDEKGG--EWPVREA-IGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAI 780

[Close]

BLAST of mRNA_A-nodosum_M_contig1083.4.1 vs. uniprot
Match: A0A6H5KYI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYI5_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 1.860e-20
Identity = 42/87 (48.28%), Postives = 67/87 (77.01%), Query Frame = 0

Query:    1 MNQTAYAENLVAQYEISATSKIPGSPGVDLGPRKDGEPGGKDEFSLYQPLVGSLMWLSVMTRPDIVNALRACARHSHNPSPRHWKAL 87
            ++QTAY ++++ +++  +TS+IP SPGVDLGP++D E GG  E+S+ +  +GS+MW+S  +RPD+  A+RA ARH+H P+ RHW A+
Sbjct:  941 ISQTAYIDSMLIRFDEQSTSRIPASPGVDLGPKRDDEKGG--EWSVREA-IGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAI 1024

[Close]

BLAST of mRNA_A-nodosum_M_contig1083.4.1 vs. uniprot
Match: A0A6H5K274_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K274_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 3.410e-20
Identity = 40/87 (45.98%), Postives = 67/87 (77.01%), Query Frame = 0

Query:    1 MNQTAYAENLVAQYEISATSKIPGSPGVDLGPRKDGEPGGKDEFSLYQPLVGSLMWLSVMTRPDIVNALRACARHSHNPSPRHWKAL 87
            ++QTAY +++VA++++ +TS+IP +PG DLGP+++ E GG  E+ + +  +GS+MW+S  +RPD+  A+RA ARH+H P+ RHW A+
Sbjct:  495 ISQTAYIDSMVARFDVQSTSRIPATPGADLGPKREDEEGG--EWPVREA-IGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAI 578

[Close]

BLAST of mRNA_A-nodosum_M_contig1083.4.1 vs. uniprot
Match: A0A6H5JJ03_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ03_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 4.680e-20
Identity = 41/87 (47.13%), Postives = 66/87 (75.86%), Query Frame = 0

Query:    1 MNQTAYAENLVAQYEISATSKIPGSPGVDLGPRKDGEPGGKDEFSLYQPLVGSLMWLSVMTRPDIVNALRACARHSHNPSPRHWKAL 87
            ++QTAY +++V  +++ +TS+IP SPGVDLGP++D E GG  E+ + +  +GS+MW+S  +RPD+  A+RA ARH+H P+ RHW ++
Sbjct:  593 ISQTAYIDSMVKCFDVQSTSRIPASPGVDLGPKRDDEKGG--EWPVREA-IGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDSI 676

The following BLAST results are available for this feature:

BLAST of mRNA_A-nodosum_M_contig1083.4.1 vs. uniprot

BLAST of mRNA_A-nodosum_M_contig1083.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JCG0_9PHAE	1.390e-21	48.86	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5K123_9PHAE	2.620e-21	47.13	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JC10_9PHAE	5.270e-21	48.28	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5JBN2_9PHAE	5.300e-21	48.28	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5KBH1_9PHAE	6.130e-21	44.83	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5KPT0_9PHAE	1.700e-20	44.83	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5KYH9_9PHAE	1.840e-20	47.13	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5KYI5_9PHAE	1.860e-20	48.28	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K274_9PHAE	3.410e-20	45.98	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JJ03_9PHAE	4.680e-20	47.13	Integrase catalytic domain-containing protein n=1 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..42

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
A-nodosum_M_contig1083	contig	A-nodosum_M_contig1083:225859..226125 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ascophyllum nodosum dioecious OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_A-nodosum_M_contig1083.4.1	mRNA_A-nodosum_M_contig1083.4.1	Ascophyllum nodosum dioecious	mRNA	A-nodosum_M_contig1083 225826..226293 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_A-nodosum_M_contig1083.4.1 ID=prot_A-nodosum_M_contig1083.4.1|Name=mRNA_A-nodosum_M_contig1083.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=89bp
MNQTAYAENLVAQYEISATSKIPGSPGVDLGPRKDGEPGGKDEFSLYQPL
VGSLMWLSVMTRPDIVNALRACARHSHNPSPRHWKALL*