prot_A-nodosum_M_contig1081.5.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1081.5.1
Unique Nameprot_A-nodosum_M_contig1081.5.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length145
Homology
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BLAST of mRNA_A-nodosum_M_contig1081.5.1 vs. uniprot
Match: A0A6H5KW50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW50_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 3.610e-6
Identity = 23/34 (67.65%), Postives = 27/34 (79.41%), Query Frame = 0 
Query:   10 CKTEGCGKLPSFGVAGTKTREYCAQHAKDGMVDV 43
            CK  GC K+ SFGV GT+T EYCA HAKDGM++V
Sbjct:    4 CKQHGCSKVGSFGVQGTRTAEYCATHAKDGMLNV 37
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BLAST of mRNA_A-nodosum_M_contig1081.5.1 vs. uniprot
Match: A0A6H5JT00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT00_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 6.630e-6
Identity = 22/36 (61.11%), Postives = 29/36 (80.56%), Query Frame = 0 
Query:   10 CKTEGCGKLPSFGVAGTKTREYCAQHAKDGMVDVKN 45
            C  E C K P++GVAG+K RE+C+QHA+DGMV+V N
Sbjct:   64 CGHENCTKRPTYGVAGSKKREFCSQHARDGMVNVNN 99
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BLAST of mRNA_A-nodosum_M_contig1081.5.1 vs. uniprot
Match: D7FI73_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI73_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 3.910e-5
Identity = 21/36 (58.33%), Postives = 28/36 (77.78%), Query Frame = 0 
Query:   10 CKTEGCGKLPSFGVAGTKTREYCAQHAKDGMVDVKN 45
            C    C K P++GVAG+K RE+C+QHA+DGMV+V N
Sbjct:    4 CGHANCTKRPTYGVAGSKKREFCSQHARDGMVNVNN 39
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BLAST of mRNA_A-nodosum_M_contig1081.5.1 vs. uniprot
Match: D8LCI2_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCI2_ECTSI)

HSP 1 Score: 52.0 bits (123), Expect = 4.110e-5
Identity = 22/37 (59.46%), Postives = 28/37 (75.68%), Query Frame = 0 
Query:    9 KCKTEGCGKLPSFGVAGTKTREYCAQHAKDGMVDVKN 45
            +C   GCGK  S+GV GTK RE+C +HAK GMVDV++
Sbjct:    5 RCGHPGCGKHSSYGVKGTKEREFCGRHAKMGMVDVRS 41
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1081.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KW50_9PHAE3.610e-667.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT00_9PHAE6.630e-661.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI73_ECTSI3.910e-558.33EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LCI2_ECTSI4.110e-559.46EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCI2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.10.140.110coord: 66..126
e-value: 1.0E-9
score: 40.5
coord: 23..65
e-value: 4.1E-6
score: 29.0
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 10..44
e-value: 8.3E-9
score: 35.9
coord: 48..82
e-value: 2.5E-9
score: 37.5
coord: 93..120
e-value: 0.28
score: 11.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1081contigA-nodosum_M_contig1081:99687..100121 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1081.5.1mRNA_A-nodosum_M_contig1081.5.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1081 99687..100900 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1081.5.1 ID=prot_A-nodosum_M_contig1081.5.1|Name=mRNA_A-nodosum_M_contig1081.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=145bp
MVIIRSKRKCKTEGCGKLPSFGVAGTKTREYCAQHAKDGMVDVKNRKCKT
DVCSKCPSFGVAGTKTAEYCAQHARDGMVDVRHGNTKTGGGGKHPSFGVP
GKETHEFCSRYSPHGMVNVKKRRRTTGDYSIGRLSVKECRGLDIG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys