prot_A-nodosum_M_contig1081.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1081.3.1
Unique Nameprot_A-nodosum_M_contig1081.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length163
Homology
BLAST of mRNA_A-nodosum_M_contig1081.3.1 vs. uniprot
Match: UPI001C988E4D (hypothetical protein n=3 Tax=Bacteria TaxID=2 RepID=UPI001C988E4D)

HSP 1 Score: 140 bits (353), Expect = 1.600e-37
Identity = 68/156 (43.59%), Postives = 102/156 (65.38%), Query Frame = 0
Query:   10 PDEPTTLHEAKVSPEWPQWRGALKREMDGQIARGVWKVVDRPNGKTVLGTKTVFKRKVGQDGRVETYKCRFVAKSFRQVKGIHYQESSSPTPTQSSIRMALAVMALLDWEGWQLDVEMAFLEAGVTEELYVELPDGYRDS--PNQVGRLQKAMYGL 163
            PD+PTT   A +  +  +W+ A+K EMD   + GVW +VD P G   +G K ++KRK+G DG+VETYK R VAK + Q +G+ Y+E+ SP     SIR+ LA+ A  D+E  Q+DV+ AFL   + E+LY+E P G+  S   ++V +L++++YGL
Sbjct:   86 PDDPTTYEGAMLDIDSSRWQEAMKSEMDSMYSNGVWTLVDPPEGIVPIGCKWIYKRKIGSDGKVETYKARLVAKGYNQKQGVDYEETFSPVAMLKSIRILLAIAAYYDYEICQMDVKTAFLNGNIEEDLYMEQPKGFISSGEDHKVCKLKRSIYGL 241          
BLAST of mRNA_A-nodosum_M_contig1081.3.1 vs. uniprot
Match: A0A2I0J8X0_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0J8X0_PUNGR)

HSP 1 Score: 138 bits (347), Expect = 9.790e-37
Identity = 69/155 (44.52%), Postives = 98/155 (63.23%), Query Frame = 0
Query:   11 DEPTTLHEAKVSPEWPQWRGALKREMDGQIARGVWKVVDRPNGKTVLGTKTVFKRKVGQDGRVETYKCRFVAKSFRQVKGIHYQESSSPTPTQSSIRMALAVMALLDWEGWQLDVEMAFLEAGVTEELYVELPDGYRD--SPNQVGRLQKAMYGL 163
            DEPTT  EA + P+  +W  A++ EM+      VW +VD P G  ++G K VFK+K   DG V T+K R VAK FRQV G+ Y E+ SP     SIR+ LA+ A  D+E WQ+DV+ AFL   + E++Y+  P+G+ D  S  +V +LQ+++YGL
Sbjct:   70 DEPTTYAEAVIGPDSEKWLVAMRSEMESMYTNQVWTLVDPPEGAKLIGYKWVFKKKTDMDGNVITFKRRLVAKGFRQVHGVDYDETFSPVAMLKSIRILLAIAAYYDYEIWQMDVKTAFLNGNLLEDVYMTQPEGFVDPHSAEKVCKLQRSIYGL 224          
BLAST of mRNA_A-nodosum_M_contig1081.3.1 vs. uniprot
Match: A0A2K3KEZ8_TRIPR (Putative retrotransposon Ty1-copia subclass protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3KEZ8_TRIPR)

HSP 1 Score: 135 bits (341), Expect = 2.570e-36
Identity = 66/155 (42.58%), Postives = 96/155 (61.94%), Query Frame = 0
Query:   11 DEPTTLHEAKVSPEWPQWRGALKREMDGQIARGVWKVVDRPNGKTVLGTKTVFKRKVGQDGRVETYKCRFVAKSFRQVKGIHYQESSSPTPTQSSIRMALAVMALLDWEGWQLDVEMAFLEAGVTEELYVELPDGY--RDSPNQVGRLQKAMYGL 163
            DEP T  EA + PE  +W  A+K E D      VW +V+ P G   +G K VFK+K   DG+V TYK R VAK F+Q+ GI+Y E+ SP     SIR+ L + A  D+E WQ+DV+ AFL   + E++Y+  P+G+   +  N++ +LQ+++YGL
Sbjct:  109 DEPVTYQEAIIGPESEKWLEAMKSETDSVYINQVWTLVEPPEGINPIGCKWVFKKKTDMDGKVHTYKARLVAKGFKQIHGINYDETFSPVAMIKSIRILLVIAAYHDYEIWQMDVKTAFLNGNLLEDVYMTQPEGFGISEEANKICKLQRSIYGL 263          
BLAST of mRNA_A-nodosum_M_contig1081.3.1 vs. uniprot
Match: A0A2K3MK96_TRIPR (Putative retrotransposon Ty1-copia subclass protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MK96_TRIPR)

HSP 1 Score: 135 bits (341), Expect = 2.700e-36
Identity = 66/155 (42.58%), Postives = 96/155 (61.94%), Query Frame = 0
Query:   11 DEPTTLHEAKVSPEWPQWRGALKREMDGQIARGVWKVVDRPNGKTVLGTKTVFKRKVGQDGRVETYKCRFVAKSFRQVKGIHYQESSSPTPTQSSIRMALAVMALLDWEGWQLDVEMAFLEAGVTEELYVELPDGY--RDSPNQVGRLQKAMYGL 163
            DEP T  EA + PE  +W  A+K E D      VW +V+ P G   +G K VFK+K   DG+V TYK R VAK F+Q+ GI+Y E+ SP     SIR+ L + A  D+E WQ+DV+ AFL   + E++Y+  P+G+   +  N++ +LQ+++YGL
Sbjct:  117 DEPVTYQEAIIGPESEKWLEAMKSETDSVYINQVWTLVEPPEGINPIGCKWVFKKKTDMDGKVHTYKARLVAKGFKQIHGINYDETFSPVAMIKSIRILLVIAAYHDYEIWQMDVKTAFLNGNLLEDVYMTQPEGFGISEEANKICKLQRSIYGL 271          
BLAST of mRNA_A-nodosum_M_contig1081.3.1 vs. uniprot
Match: A0A396GW39_MEDTR (Putative RNA-directed DNA polymerase n=2 Tax=Medicago truncatula TaxID=3880 RepID=A0A396GW39_MEDTR)

HSP 1 Score: 142 bits (358), Expect = 3.330e-36
Identity = 68/155 (43.87%), Postives = 98/155 (63.23%), Query Frame = 0
Query:   11 DEPTTLHEAKVSPEWPQWRGALKREMDGQIARGVWKVVDRPNGKTVLGTKTVFKRKVGQDGRVETYKCRFVAKSFRQVKGIHYQESSSPTPTQSSIRMALAVMALLDWEGWQLDVEMAFLEAGVTEELYVELPDGYRD--SPNQVGRLQKAMYGL 163
            DEP T  EA   PE+ +W  A+K EMD      VW ++D P G   +G K VFK+K+  DG+V TYK R VAK F+Q+ G+ Y E+ SP     SIR+ LA+ A  D+E WQ+DV+ AFL   + E++Y+  P+G+ D  +  +V +LQ+++YGL
Sbjct:  765 DEPVTYTEAITGPEYEKWLEAMKSEMDSMYTNQVWNLIDAPEGINPIGCKWVFKKKIDMDGKVSTYKARLVAKGFKQIHGVDYDETFSPVAMIKSIRILLAIAAYHDYEIWQMDVKTAFLNGNLLEDVYMTQPEGFGDPKATKKVCKLQRSIYGL 919          
BLAST of mRNA_A-nodosum_M_contig1081.3.1 vs. uniprot
Match: A0A2I0IJP3_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0IJP3_PUNGR)

HSP 1 Score: 137 bits (345), Expect = 8.120e-36
Identity = 66/154 (42.86%), Postives = 99/154 (64.29%), Query Frame = 0
Query:   11 DEPTTLHEAKVSPEWPQWRGALKREMDGQIARGVWKVVDRPNGKTVLGTKTVFKRKVGQDGRVETYKCRFVAKSFRQVKGIHYQESSSPTPTQSSIRMALAVMALLDWEGWQLDVEMAFLEAGVTEELYVELPDGYRDSP-NQVGRLQKAMYGL 163
            D+PTT  EA    +  +W  A+K EMD      VW +VD P G   +G K VFKRK+G DG+VETYK R VAK +RQ +G+ Y+E+ SP     S+R+ LA+ A  D+E WQ+DV+ AFL   + E+++++ P G+     ++V +L++++YGL
Sbjct:   74 DDPTTYEEAISDIDSSKWLEAMKSEMDSMSKNQVWDLVDPPEGIVPIGNKWVFKRKIGADGKVETYKARLVAKGYRQKQGVDYEETFSPVAMLKSLRIMLAIAAHYDYEVWQMDVKTAFLNVSIEEDIFMDQPKGFESKDKSKVCKLKRSIYGL 227          
BLAST of mRNA_A-nodosum_M_contig1081.3.1 vs. uniprot
Match: UPI000D464853 (hypothetical protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI000D464853)

HSP 1 Score: 134 bits (337), Expect = 1.040e-35
Identity = 67/154 (43.51%), Postives = 97/154 (62.99%), Query Frame = 0
Query:   11 DEPTTLHEAKVSPEWPQWRGALKREMDGQIARGVWKVVDRPNGKTVLGTKTVFKRKVGQDGRVETYKCRFVAKSFRQVKGIHYQESSSPTPTQSSIRMALAVMALLDWEGWQLDVEMAFLEAGVTEELYVELPDGYRDSP-NQVGRLQKAMYGL 163
            D+P T  EA    +  +W  A+K E+D      VW +VD P G   +G K VFK+K+G DG+VETYK R VAK FRQ +GI Y+E+ SP     SIR+ LA+ A  D+E WQ+DV+ AFL   + E +++E P G+     ++V +L++++YGL
Sbjct:   58 DDPLTYEEAISDIDSSKWIDAMKSEIDSMYKNQVWDLVDPPEGIVPIGNKWVFKKKIGSDGKVETYKARLVAKGFRQRQGIDYEETFSPVAMLKSIRILLAIAAYYDYEIWQMDVKTAFLNGYIEENIFMEQPRGFESQDGSKVCKLKRSIYGL 211          
BLAST of mRNA_A-nodosum_M_contig1081.3.1 vs. uniprot
Match: UPI0020246435 (hypothetical protein n=2 Tax=Proteus mirabilis TaxID=584 RepID=UPI0020246435)

HSP 1 Score: 139 bits (349), Expect = 1.220e-35
Identity = 70/155 (45.16%), Postives = 96/155 (61.94%), Query Frame = 0
Query:   11 DEPTTLHEAKVSPEWPQWRGALKREMDGQIARGVWKVVDRPNGKTVLGTKTVFKRKVGQDGRVETYKCRFVAKSFRQVKGIHYQESSSPTPTQSSIRMALAVMALLDWEGWQLDVEMAFLEAGVTEELYVELPDGYRD--SPNQVGRLQKAMYGL 163
            DEPT   EA VSP+  +W  A+K EM       VW +VD P+ +  +  K +FK+K   DG V  YK R VAK FRQV+GI Y E+ SP     S+R+ LA+ A  D+E WQ+DV+ AFL   + EELY+  P+G+ D    N+V +LQ+++YGL
Sbjct:    6 DEPTNYEEAMVSPDSAKWLEAMKSEMGSMYENKVWTLVDLPDDRQAIENKWIFKKKTDADGNVTVYKARLVAKGFRQVQGIDYDETFSPVAMLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLEEELYMMQPEGFVDPKGANKVCKLQRSIYGL 160          
BLAST of mRNA_A-nodosum_M_contig1081.3.1 vs. uniprot
Match: UPI0015BA71EC (hypothetical protein n=1 Tax=Pseudomonas reactans TaxID=117680 RepID=UPI0015BA71EC)

HSP 1 Score: 133 bits (334), Expect = 1.800e-35
Identity = 64/155 (41.29%), Postives = 95/155 (61.29%), Query Frame = 0
Query:   11 DEPTTLHEAKVSPEWPQWRGALKREMDGQIARGVWKVVDRPNGKTVLGTKTVFKRKVGQDGRVETYKCRFVAKSFRQVKGIHYQESSSPTPTQSSIRMALAVMALLDWEGWQLDVEMAFLEAGVTEELYVELPDGYRDS--PNQVGRLQKAMYGL 163
            DEP    EA   PE  +W+ A+  E+       VW +VD   G+  +G K +FK+K   DG+V T+K R VAK F Q  G+ Y E+ SP     SIR+ LA+ A  D+E WQ+DV+ AFL   +TE++Y+  P+G+ D+  PN+V +L++++YGL
Sbjct:   71 DEPANYQEAVAGPESAKWKEAMDSEIKSMYDNQVWNLVDNVPGRKTVGCKWIFKKKTDMDGKVHTFKARLVAKGFTQTPGVDYDETFSPVAKIKSIRIMLAIAAFHDYEIWQMDVKTAFLNGKLTEDVYMNQPEGFVDAKYPNKVCKLERSIYGL 225          
BLAST of mRNA_A-nodosum_M_contig1081.3.1 vs. uniprot
Match: A0A8J5YBS1_9ROSI (Uncharacterized protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YBS1_9ROSI)

HSP 1 Score: 139 bits (351), Expect = 2.740e-35
Identity = 71/156 (45.51%), Postives = 99/156 (63.46%), Query Frame = 0
Query:   11 DEPTTLHEAKVSPEWPQWRGALKREMDGQIARGVWKVVDRPNGKTVLGTKTVFKRKVGQDGRVETYKCRFVAKSFRQVKGIHYQESSSPTPTQSSIRMALAVMALLDWEGWQLDVEMAFLEAGVTEELYVELPDGYRDSPNQVGR---LQKAMYGL 163
            DEP T  EA  SPE  +W  AL+ EMD      VW +VD P G   +G K VFK+K+  DG V+TYK R VAK FRQ+ G++Y E+ SP     SIR++LA+ A  D+E WQ+DV+ AFL   + E++Y+  P+G+ + P   G+   LQ+++YGL
Sbjct:  444 DEPRTYQEAVASPESEKWLEALRSEMDSMYENQVWTLVDPPKGVKPIGCKWVFKKKIDMDGNVQTYKGRLVAKGFRQIHGVNYDETFSPVAMFKSIRISLAIAAFHDYEIWQMDVKTAFLNGKLEEDVYMTQPEGFVN-PKDAGKICKLQRSIYGL 598          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1081.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001C988E4D1.600e-3743.59hypothetical protein n=3 Tax=Bacteria TaxID=2 RepI... [more]
A0A2I0J8X0_PUNGR9.790e-3744.52Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2K3KEZ8_TRIPR2.570e-3642.58Putative retrotransposon Ty1-copia subclass protei... [more]
A0A2K3MK96_TRIPR2.700e-3642.58Putative retrotransposon Ty1-copia subclass protei... [more]
A0A396GW39_MEDTR3.330e-3643.87Putative RNA-directed DNA polymerase n=2 Tax=Medic... [more]
A0A2I0IJP3_PUNGR8.120e-3642.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI000D4648531.040e-3543.51hypothetical protein n=1 Tax=Escherichia coli TaxI... [more]
UPI00202464351.220e-3545.16hypothetical protein n=2 Tax=Proteus mirabilis Tax... [more]
UPI0015BA71EC1.800e-3541.29hypothetical protein n=1 Tax=Pseudomonas reactans ... [more]
A0A8J5YBS1_9ROSI2.740e-3545.51Uncharacterized protein n=1 Tax=Gossypium anomalum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 44..163
e-value: 1.0E-27
score: 97.3
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 12..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1081contigA-nodosum_M_contig1081:18610..19098 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1081.3.1mRNA_A-nodosum_M_contig1081.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1081 18610..19098 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1081.3.1 ID=prot_A-nodosum_M_contig1081.3.1|Name=mRNA_A-nodosum_M_contig1081.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=163bp
MPTGLASYLPDEPTTLHEAKVSPEWPQWRGALKREMDGQIARGVWKVVDR
PNGKTVLGTKTVFKRKVGQDGRVETYKCRFVAKSFRQVKGIHYQESSSPT
PTQSSIRMALAVMALLDWEGWQLDVEMAFLEAGVTEELYVELPDGYRDSP
NQVGRLQKAMYGL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2