prot_A-nodosum_M_contig1081.10.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1081.10.1
Unique Nameprot_A-nodosum_M_contig1081.10.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length56
Homology
BLAST of mRNA_A-nodosum_M_contig1081.10.1 vs. uniprot
Match: A0A6H5KNG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNG1_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 1.630e-7
Identity = 26/46 (56.52%), Postives = 36/46 (78.26%), Query Frame = 0
Query:    1 MQVAVKAGVDDQFATLAASIFAGRNRSAVPFGSVEELLDSLGDSTN 46
            +QVAVKAGV DQ+ATL A +F GRN  A+P+ S+E L+++L D T+
Sbjct:  159 LQVAVKAGVTDQYATLTAPVFHGRNTQALPYDSLESLMEALDDMTD 204          
BLAST of mRNA_A-nodosum_M_contig1081.10.1 vs. uniprot
Match: A0A6H5KZQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZQ9_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 7.980e-7
Identity = 25/46 (54.35%), Postives = 35/46 (76.09%), Query Frame = 0
Query:    1 MQVAVKAGVDDQFATLAASIFAGRNRSAVPFGSVEELLDSLGDSTN 46
            +QVAVKAGV DQ+AT  A +F GRN  A+P+ S+E L+++L D T+
Sbjct: 1210 LQVAVKAGVTDQYATCTAPVFHGRNTQALPYDSLESLMEALDDMTD 1255          
BLAST of mRNA_A-nodosum_M_contig1081.10.1 vs. uniprot
Match: A0A6H5JI85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI85_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 3.360e-6
Identity = 24/43 (55.81%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    1 MQVAVKAGVDDQFATLAASIFAGRNRSAVPFGSVEELLDSLGD 43
            +QVAVKAGV DQFATL A +F GRN  A+P+ ++++L+ +L D
Sbjct:  199 LQVAVKAGVTDQFATLTAPVFHGRNTQALPYDNLDDLMAALED 241          
BLAST of mRNA_A-nodosum_M_contig1081.10.1 vs. uniprot
Match: A0A6H5JVS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS0_9PHAE)

HSP 1 Score: 49.7 bits (117), Expect = 1.120e-5
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    1 MQVAVKAGVDDQFATLAASIFAGRNRSAVPFGSVEELLDSL 41
            +QVAVKAGV DQFATL A +F GRN  A+P+  +++L+ +L
Sbjct:   58 LQVAVKAGVTDQFATLTAPVFHGRNTQALPYDKLDDLMAAL 98          
BLAST of mRNA_A-nodosum_M_contig1081.10.1 vs. uniprot
Match: A0A6H5KFF1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFF1_9PHAE)

HSP 1 Score: 49.3 bits (116), Expect = 2.490e-5
Identity = 23/43 (53.49%), Postives = 32/43 (74.42%), Query Frame = 0
Query:    1 MQVAVKAGVDDQFATLAASIFAGRNRSAVPFGSVEELLDSLGD 43
            +QVAVKAGV DQFATL A +F GRN  A+P+  +++L+ +  D
Sbjct:  489 LQVAVKAGVTDQFATLTAPVFHGRNTQALPYDKLDDLMVAFED 531          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1081.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KNG1_9PHAE1.630e-756.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZQ9_9PHAE7.980e-754.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JI85_9PHAE3.360e-655.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVS0_9PHAE1.120e-556.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFF1_9PHAE2.490e-553.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1081contigA-nodosum_M_contig1081:134923..135090 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1081.10.1mRNA_A-nodosum_M_contig1081.10.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1081 134784..135237 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1081.10.1 ID=prot_A-nodosum_M_contig1081.10.1|Name=mRNA_A-nodosum_M_contig1081.10.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=56bp
MQVAVKAGVDDQFATLAASIFAGRNRSAVPFGSVEELLDSLGDSTNEPYS
SNCCN*
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