prot_A-nodosum_M_contig1080.5.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1080.5.1
Unique Nameprot_A-nodosum_M_contig1080.5.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length76
Homology
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BLAST of mRNA_A-nodosum_M_contig1080.5.1 vs. uniprot
Match: D7FRU4_ECTSI (BZIP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRU4_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 3.460e-9
Identity = 34/51 (66.67%), Postives = 39/51 (76.47%), Query Frame = 0 
Query:    1 RTALLSNSLVVSREENDSRKQEMASLREQNSFLRGMLSAKGVAHELPPLLP 51
            R   LS SL  SR+E  S KQE+ASLREQNSFLRGMLSA G A +LPP++P
Sbjct:  340 RADTLSKSLAASRDETASLKQEIASLREQNSFLRGMLSAHGSAIDLPPIMP 390
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1080.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRU4_ECTSI3.460e-966.67BZIP domain-containing protein n=2 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1080contigA-nodosum_M_contig1080:193710..193937 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1080.5.1mRNA_A-nodosum_M_contig1080.5.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1080 193708..193937 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1080.5.1 ID=prot_A-nodosum_M_contig1080.5.1|Name=mRNA_A-nodosum_M_contig1080.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=76bp
RTALLSNSLVVSREENDSRKQEMASLREQNSFLRGMLSAKGVAHELPPLL
PISSIRQSSGSNGGGGGSAVTAVNAV
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