prot_A-nodosum_M_contig108.20.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig108.20.2
Unique Nameprot_A-nodosum_M_contig108.20.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1282
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig108.20.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 218..238
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 582..598
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 722..784
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 534..598
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 351..378
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1084..1136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 553..570
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1082..1136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 474..516
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 275..312

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig108contigA-nodosum_M_contig108:213464..219609 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig108.20.2mRNA_A-nodosum_M_contig108.20.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig108 213253..219949 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig108.20.2 ID=prot_A-nodosum_M_contig108.20.2|Name=mRNA_A-nodosum_M_contig108.20.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1282bp
MTPAIIPQQRQPSRYVGRLHLVSRSVQSVEAQIVMKLRRARVCGSRLVPS
TSAPHLLPCPLQLSRALREKASPTPEANGHAAKPRLLLNHNHDINSNGGF
MYPAAPKRASSDQTHNRHNMSVEIKPREPPLVAVDARDNDCPSASATRQG
DVERVGRETGEVSRRQDDDTGDTSMDGLGLLSKRPLDSGVHLTKWRRRAV
RGEKVLRQLGRTRESMDIDIEEKRLQMARDLVRRLTAEKKGLLVPTAAKT
EKERTTTTAATGSAAISARGEEACEKTRGCDKQGKPSRTPVRRVPWRTGR
SKSKIPSEEKERAKKRAFPARQVYVASTAAAMPTLYPRVFDGNRVHRRAS
RCSHTPCSGGDPAGPLEKQSSPSMPRQSYPPPWNAGLTAGLGVGPQIRAT
QGGGIRRSHARHATGNTRFGPYNVRDGEEAVSEPWIRDWECPSCGCDSHP
DLGSIAPDDGEWFPACTLSDAGRQQKDDGIDDSEAQGCWLGRGGALSRRT
PLRPPSRRGPRPARHLTPPCGQCRHCGVPMGRRVDQVQGRNTAHKSQKGA
WHRHARWREGGAEDKSPRRARKPSATRRFAGRPPEPRQRREKRPRWNSRF
WVPEQMAAAPRPAVNQCGSSQTADCAEPAQVAGTRGAVRATVHPCDCPSQ
ADDVGARLAQIKQEHALHEIGRVYAHEIGDDNEYQERDDDSLTVVLTEES
ELDISSNDGRRGLEMIVSELSTTMFSREPPQRPERRGGSLGNTHHGQGES
PRPEGVLPRIFGDTYNRDDSDVGMQGRESDNGGVPASRGLLLEFMWPSTP
RSAYCVVCTEAATAVAPPGREWPSWSAHHPQCIGERKAGRGNSGALVAEE
SGKALASRRPALPMVTRRTERSQSSHSTTLTRSIDSPLLRSNRCCSANYL
VLTLGFLRHMVEIFLAGGGENHHPKKAAGVTASGGDQGLRNQRRASPSHS
TLWSDTRAALGRIHAFSTFGAEGRGINRSDTIQGRLLDAMAPTDLCRGLV
PLIVRAFRPPQNFFRRRKRDGSGALCDDGLEFGVFLGWAVRKQLQLPSGR
PRRDVGARVTAVDIFRRLYKYESGCDGNEGSGANGKGHLSTSTTGGGKFH
RWITPESTVSTTQSDASSDSRQASSNPTDDASSADAFDRSYNISTRSTTF
ITEDADLSLSYAAVGGSASAETLSSLGTWGVSTEAGGSVTSSLGNTSGVS
DVHPEANEMSTLSIVSGGNGLGRAPRVDSCPYPCGLNLRILAEMQRANPH
VRFPGLAEAARMFADELARLAEGSGGAAADG*
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