prot_A-nodosum_M_contig108.18.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig108.18.1
Unique Nameprot_A-nodosum_M_contig108.18.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length688
Homology
BLAST of mRNA_A-nodosum_M_contig108.18.1 vs. uniprot
Match: A0A6H5L5S3_9PHAE (Fe2OG dioxygenase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5S3_9PHAE)

HSP 1 Score: 237 bits (604), Expect = 3.750e-63
Identity = 204/528 (38.64%), Postives = 259/528 (49.05%), Query Frame = 0
Query:  208 EAVAAKILTEALFPRGRFREESDRAPPAVI---------MRESWALLVEALTAAAREKRDEKKLGRGVVAV-----------GAVIDPVEFPLLLGERMHADVVGGMAANLLDVEVQSPLVEYGEALVTQGRPVQRQALQVLEPALRAMEADDVEDNSDGDYDSDSDAYEPPLSEGSSTNAEDTAS----NFKVPSRESLATKRCDMDDPDSSGHRLETLAENRASAR-------------------LAWRCLDFARAAACVVPPLSAKVLLPAAALRLPHSCAPAIKVPAGDPRSYRRDGGVAGDDARFPTAGAPGWPLSVAAVALRDIPAGAQLACSWVDTEQRLSVRMAKLRDYGEDATTAA---VIMPSAHDADHRGFCGCSKCRVEGAV-----------GQDEDGTPGFSPLGT---------------KGLLEAARLAADEDRFDDAADALRRAARLSPYDGDVLYRAGVCAINQGRWSRALRLWREGLALSPDLSGLKHEADRYRASPSGLAPPTCHAKT 663
            EA A + +TEA FPRG     +D +PP            +RESW LL+EAL +       E   G G VA              +IDP  FPLLLG R H  VV G+AANLL+VEV+SP+VEY EALVTQG  VQRQAL+VLEP L      D+ED SD     DSD      S  S+  A D+      +  +  R + AT R   ++  +                                   LAWRC++ AR+A+ ++P L+A  LLPA+ALRLPHSC PA +VPAGD RSY   GG  G  +  PTAGA GWPL+VA VALRD+ AG  L+CSWVD E+  SVRMA+L +Y      A+     +P+A D      C  S C +EG             G  E G  G S  GT               K L+E+  LA        +A A  R           L +    A+++    RALRLW++GLALSP+   LK EA++Y+A    L P    A T
Sbjct:  143 EAAAVREITEA-FPRGWI---ADVSPPXXXXXXXXXXXXIRESWTLLLEALESKVVSGGTEA--GTGAVAALXXXXXXXXXXAVLIDPGSFPLLLGRRFHESVVRGLAANLLEVEVESPVVEYCEALVTQGDDVQRQALKVLEPTLN-----DMEDESDF---PDSDEIIIVSSSSSNGVASDSEGERDGSVDINGRRAPATSRSSTENLPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAWRCVEAARSASRLLPRLTAHALLPASALRLPHSCTPAARVPAGDRRSYNVGGG--GVVSGAPTAGAAGWPLAVATVALRDLAAGEALSCSWVDPEEPFSVRMARLEEYSRVPPWASDDXXXVPTAGD------CAASSCPLEGXXXXXXXXXNDCRGSKETGVSGRSGEGTLASLQFPRGRGCGCPKCLVESGGLAGGGSEGVSSAGAAER-----------LLKVAQQAVDE---DRALRLWKDGLALSPNHPELKREAEKYQALAFWLDPGEGDANT 634          
BLAST of mRNA_A-nodosum_M_contig108.18.1 vs. uniprot
Match: D7G7N2_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N2_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 1.370e-29
Identity = 70/107 (65.42%), Postives = 82/107 (76.64%), Query Frame = 0
Query:  544 CGCSKCRVEGAVGQDEDGTPGFSPLGT-KGLLEAARLAADEDRFDDAADALRRAARLSPYDGDVLYRAGVCAINQGRWSRALRLWREGLALSPDLSGLKHEADRYRA 649
            CGC KC VE   G D DG+ G S  G  + LL+AA+ A DEDRFDDA +AL RAAR +P + D+LYRAGVCAINQGRWSRALRLWR+GLALSPD   LK EA++Y+A
Sbjct:   78 CGCPKCLVESG-GLDGDGSEGMSGAGAAERLLKAAQQAVDEDRFDDAFEALSRAARAAPDNSDILYRAGVCAINQGRWSRALRLWRDGLALSPDHPELKREAEKYQA 183          
BLAST of mRNA_A-nodosum_M_contig108.18.1 vs. uniprot
Match: A0A7S4ULU5_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4ULU5_9DINO)

HSP 1 Score: 75.9 bits (185), Expect = 7.350e-11
Identity = 36/71 (50.70%), Postives = 49/71 (69.01%), Query Frame = 0
Query:   68 QSPVPCAAGCGEIYCSDVCRTRCWDLGHSLLCLGLAEDENHPLVRHKLHAVDHPDLEAPLLLASQVLVQAA 138
            ++PV C+ GCGE+YCS  CR   +   H+LLC+GL EDE+HPL+R K+HA++  D    LLLA+QV    A
Sbjct:   65 KAPVRCSQGCGELYCSAECRDAHFKHSHNLLCVGLLEDEDHPLIRFKVHALERTDT---LLLAAQVFANLA 132          
BLAST of mRNA_A-nodosum_M_contig108.18.1 vs. uniprot
Match: A0A2R5G999_9STRA (Procollagen-lysine,2-oxoglutarate 5-dioxygenase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G999_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 5.010e-5
Identity = 29/58 (50.00%), Postives = 35/58 (60.34%), Query Frame = 0
Query:   61 STCSMLRQSPVPCAAGCGEIYCSDVCRTRCW-DLGHSLLCLGLAEDENHPLVRHKLHA 117
            ST        V C+ GCGEIYCS++CR R + D GH   CLGLAE E H L + +L A
Sbjct:   77 STFGAFGAESVVCSLGCGEIYCSELCRARHFEDGGHRFFCLGLAESEEHELYQFRLAA 134          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig108.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L5S3_9PHAE3.750e-6338.64Fe2OG dioxygenase domain-containing protein (Fragm... [more]
D7G7N2_ECTSI1.370e-2965.42Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A7S4ULU5_9DINO7.350e-1150.70Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A2R5G999_9STRA5.010e-550.00Procollagen-lysine,2-oxoglutarate 5-dioxygenase n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 604..637
e-value: 0.24
score: 20.4
coord: 570..603
e-value: 25.0
score: 11.4
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 604..637
score: 8.0834
IPR046341SET domain superfamilyGENE3D2.170.270.10SET domaincoord: 419..553
e-value: 1.8E-5
score: 26.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 570..648
e-value: 4.6E-10
score: 41.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 573..637
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 334..393
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 358..380
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 341..355
IPR044237Histone-lysine N-methyltransferase ATXR2-likePANTHERPTHR47436HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2coord: 68..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig108contigA-nodosum_M_contig108:206057..209983 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig108.18.1mRNA_A-nodosum_M_contig108.18.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig108 205979..211614 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig108.18.1 ID=prot_A-nodosum_M_contig108.18.1|Name=mRNA_A-nodosum_M_contig108.18.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=688bp
MPWVVACPGCLRHVGSLDIQLAIASGKVEPWEAFDESSSRISDAWQQQQN
PFCHNTSLFHSTCSMLRQSPVPCAAGCGEIYCSDVCRTRCWDLGHSLLCL
GLAEDENHPLVRHKLHAVDHPDLEAPLLLASQVLVQAAVKIASERLTQAP
ASSEPSNLRAVGACPHSAPAPIDDTAVPHPPPVPPVTVGFAVVDDCVVEG
CHEGCKAEAVAAKILTEALFPRGRFREESDRAPPAVIMRESWALLVEALT
AAAREKRDEKKLGRGVVAVGAVIDPVEFPLLLGERMHADVVGGMAANLLD
VEVQSPLVEYGEALVTQGRPVQRQALQVLEPALRAMEADDVEDNSDGDYD
SDSDAYEPPLSEGSSTNAEDTASNFKVPSRESLATKRCDMDDPDSSGHRL
ETLAENRASARLAWRCLDFARAAACVVPPLSAKVLLPAAALRLPHSCAPA
IKVPAGDPRSYRRDGGVAGDDARFPTAGAPGWPLSVAAVALRDIPAGAQL
ACSWVDTEQRLSVRMAKLRDYGEDATTAAVIMPSAHDADHRGFCGCSKCR
VEGAVGQDEDGTPGFSPLGTKGLLEAARLAADEDRFDDAADALRRAARLS
PYDGDVLYRAGVCAINQGRWSRALRLWREGLALSPDLSGLKHEADRYRAS
PSGLAPPTCHAKTLFLFASPPLQQLPAAGSNHSRRPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR046341SET_dom_sf
IPR011990TPR-like_helical_dom_sf
IPR044237ATXR2-like