prot_A-nodosum_M_contig10791.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig10791.1.1
Unique Nameprot_A-nodosum_M_contig10791.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length65
Homology
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BLAST of mRNA_A-nodosum_M_contig10791.1.1 vs. uniprot
Match: UPI0015BF5683 (DDE-type integrase/transposase/recombinase n=1 Tax=Pseudomonas reactans TaxID=117680 RepID=UPI0015BF5683)

HSP 1 Score: 49.3 bits (116), Expect = 3.620e-5
Identity = 22/47 (46.81%), Postives = 29/47 (61.70%), Query Frame = 0 
Query:   19 DKTPYEMWHGRLPAFDTLLPFGTVGYRRVEKPAHKRASRGAKCILLG 65
            DKTPYE+WHGR+P+   L  +G   Y R E  ++K   R  KCI +G
Sbjct:  434 DKTPYEIWHGRVPSLSYLKVWGCEAYVRQEA-SNKLEPRSTKCIFVG 479
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10791.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI0015BF56833.620e-546.81DDE-type integrase/transposase/recombinase n=1 Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10791contigA-nodosum_M_contig10791:11251..11445 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10791.1.1mRNA_A-nodosum_M_contig10791.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig10791 11239..11445 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig10791.1.1 ID=prot_A-nodosum_M_contig10791.1.1|Name=mRNA_A-nodosum_M_contig10791.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=65bp
MAYACDMSNKCVTDSLDHDKTPYEMWHGRLPAFDTLLPFGTVGYRRVEKP
AHKRASRGAKCILLG
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