prot_A-nodosum_M_contig1076.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1076.3.1
Unique Nameprot_A-nodosum_M_contig1076.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length80
Homology
BLAST of mRNA_A-nodosum_M_contig1076.3.1 vs. uniprot
Match: A0A6H5JR13_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR13_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 2.910e-6
Identity = 30/79 (37.97%), Postives = 46/79 (58.23%), Query Frame = 0
Query:    1 MNQKAFAKNMIEQYNISATLNIPGSPGVDLGRRKYGEPGGNEEFPKYRALVGSLMWLLVMTRSDIANAFRACARHSHNP 79
            ++Q+ + K + E+Y +     IP      L      EP  + E+P +RAL+GSL+W+ ++TR DIANA RA AR+   P
Sbjct:  424 ISQETYTKELGERYGVEWGGGIPLPTTWRLWDSDVNEP--SVEYP-FRALIGSLLWVALLTRPDIANAVRAVARYCSEP 499          
BLAST of mRNA_A-nodosum_M_contig1076.3.1 vs. uniprot
Match: UPI001D05617A (reverse transcriptase (RNA-dependent DNA polymerase) domain-containing protein n=1 Tax=Hirsutella rhossiliensis TaxID=111463 RepID=UPI001D05617A)

HSP 1 Score: 52.4 bits (124), Expect = 5.490e-6
Identity = 31/85 (36.47%), Postives = 45/85 (52.94%), Query Frame = 0
Query:    1 MNQKAFAKNMIEQYNISAT--LNIPGSPGVDLGRRKYGEPGGNEEFPKYRAL----VGSLMWLLVMTRSDIANAFRACARHSHNP 79
            ++Q+A+ + ++  YN+S     N PG       RR+   P      PKY+A     VGSLM+ ++ TRSDI  +  AC RH  NP
Sbjct:  838 LSQRAYIEKILRTYNMSDCNPANTPGRRSAPASRRRLARP------PKYQAAYAKRVGSLMYAMLGTRSDICFSVGACCRHLANP 916          
BLAST of mRNA_A-nodosum_M_contig1076.3.1 vs. uniprot
Match: A0A0J7K6V4_LASNI (Integrase core domain protein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K6V4_LASNI)

HSP 1 Score: 51.6 bits (122), Expect = 7.450e-6
Identity = 27/81 (33.33%), Postives = 49/81 (60.49%), Query Frame = 0
Query:    1 MNQKAFAKNMIEQYNI--SATLNIPGSPGVDLGRRKYGEPGGNEEFPKYRALVGSLMWLLVMTRSDIANAFRACARHSHNP 79
            +NQ  +A+ +IE++ +  +  ++IP     DL  + +G  G   E P Y+  VGSL++L ++TR DIA A  A ++++ +P
Sbjct:  140 VNQTKYARKIIERFRVEDAHAVSIPADQHQDLSLKHFGNKGKAIEVP-YKEAVGSLLYLAMVTRPDIAYAVSAVSQYAESP 219          
BLAST of mRNA_A-nodosum_M_contig1076.3.1 vs. uniprot
Match: A0A6H5JWK8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWK8_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 1.330e-5
Identity = 29/79 (36.71%), Postives = 46/79 (58.23%), Query Frame = 0
Query:    1 MNQKAFAKNMIEQYNISATLNIPGSPGVDLGRRKYGEPGGNEEFPKYRALVGSLMWLLVMTRSDIANAFRACARHSHNP 79
            ++Q+ + K + E++ +     IP      L      EP  + E+P +RAL+GSL+W+ ++TR DIANA RA AR+   P
Sbjct:  120 ISQETYTKELGERHGVEWGGGIPLPTTWRLWDSDVNEP--SVEYP-FRALIGSLLWVALLTRPDIANAVRAVARYCSEP 195          
BLAST of mRNA_A-nodosum_M_contig1076.3.1 vs. uniprot
Match: UPI001D058071 (reverse transcriptase (RNA-dependent DNA polymerase) domain-containing protein n=1 Tax=Hirsutella rhossiliensis TaxID=111463 RepID=UPI001D058071)

HSP 1 Score: 50.4 bits (119), Expect = 1.610e-5
Identity = 29/79 (36.71%), Postives = 40/79 (50.63%), Query Frame = 0
Query:    3 QKAFAKNMIEQYNIS-ATLNIPGSPGVDLGRRKYGEPGGNEEFPKYRALVGSLMWLLVMTRSDIANAFRACARHSHNPS 80
            Q A+ + +  ++ +S   L +P  P   +   KY      EE   Y+  VGSLM++ VMTR DIA A    AR   NPS
Sbjct:   97 QDAYVEKIARKFKLSDLKLRVPSIPIATIPLVKYNGQATKEEIKAYQERVGSLMYIAVMTRPDIARAAAQLARFLTNPS 175          
BLAST of mRNA_A-nodosum_M_contig1076.3.1 vs. uniprot
Match: B8MN30_TALSN (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) TaxID=441959 RepID=B8MN30_TALSN)

HSP 1 Score: 50.8 bits (120), Expect = 1.900e-5
Identity = 30/78 (38.46%), Postives = 44/78 (56.41%), Query Frame = 0
Query:    3 QKAFAKNMIEQYNISATLNIPGSPGVDLGRRKYGEPGGNEEFPKYRALVGSLMWLLVMTRSDIANAFRACARHSHNPS 80
            Q +  K M  ++ I+AT NI  +P +    +   E   NEE   Y+ LVGS +++ VMTR D+A A    A+H+ NPS
Sbjct:  719 QDSQIKKMASKFGINATNNIK-TP-ISGNIKASTEQAINEEIHAYQELVGSALYVAVMTRVDVAKAVNELAKHTKNPS 794          
BLAST of mRNA_A-nodosum_M_contig1076.3.1 vs. uniprot
Match: A0A6A4ZE01_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZE01_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 2.660e-5
Identity = 25/79 (31.65%), Postives = 46/79 (58.23%), Query Frame = 0
Query:    1 MNQKAFAKNMIEQYNISATLNIPGSPGVDLGRRKYGEPGGNEEFPKYRALVGSLMWLLVMTRSDIANAFRACARHSHNP 79
            M Q A+ + ++E++ +S+   +      D     + E   N +  +YRA++GSL++L+V TR DIA+A +  + H H+P
Sbjct: 1376 MTQDAYTEKVLERFKMSSCHPVTTPEVADQEDLWHDENQPNADQGEYRAMIGSLVYLMVCTRPDIAHAVQRLSCHLHDP 1454          
BLAST of mRNA_A-nodosum_M_contig1076.3.1 vs. uniprot
Match: UPI001D0401F3 (reverse transcriptase (RNA-dependent DNA polymerase) domain-containing protein n=1 Tax=Hirsutella rhossiliensis TaxID=111463 RepID=UPI001D0401F3)

HSP 1 Score: 50.1 bits (118), Expect = 3.470e-5
Identity = 29/79 (36.71%), Postives = 40/79 (50.63%), Query Frame = 0
Query:    3 QKAFAKNMIEQYNIS-ATLNIPGSPGVDLGRRKYGEPGGNEEFPKYRALVGSLMWLLVMTRSDIANAFRACARHSHNPS 80
            Q A+ + +  ++ +S   L +P  P   +   KY      EE   Y+  VGSLM++ VMTR DIA A    AR   NPS
Sbjct:  264 QDAYIEKIARKFKLSDLKLRVPSIPIATIPLVKYNGQATKEEIKAYQERVGSLMYIAVMTRPDIARAAAQLARFLTNPS 342          
BLAST of mRNA_A-nodosum_M_contig1076.3.1 vs. uniprot
Match: A0A6V7LZ10_9HYME (Uncharacterized protein (Fragment) n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7LZ10_9HYME)

HSP 1 Score: 47.8 bits (112), Expect = 3.760e-5
Identity = 28/70 (40.00%), Postives = 42/70 (60.00%), Query Frame = 0
Query:    1 MNQKAFAKNMIEQYNI--SATLNIPGSPGVDLGRRKYGEPGGNEEFPKYRALVGSLMWLLVMTRSDIANA 68
            M+QK   K++IE++ +  S  ++ P  PG  L + ++ E     +   YR LVGSLM+L V TR DIA+A
Sbjct:   12 MSQKGSLKDVIERFGMEDSGPVSTPIEPGTRLQKPQFEEELQEPKDLPYRELVGSLMYLAVSTRPDIAHA 81          
BLAST of mRNA_A-nodosum_M_contig1076.3.1 vs. uniprot
Match: A0A2D7NJ42_9PLAN (CCHC-type domain-containing protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D7NJ42_9PLAN)

HSP 1 Score: 49.7 bits (117), Expect = 4.810e-5
Identity = 28/84 (33.33%), Postives = 44/84 (52.38%), Query Frame = 0
Query:    1 MNQKAFAKNMIEQYNISATLNIPGSPGVDLGRRKYGEPGGNEEFPK-----YRALVGSLMWLLVMTRSDIANAFRACARHSHNP 79
            ++Q+ + + +++++       +P      +   K   P  +EE  +     YR +VGSLMWL V TR D+A A  ACAR S NP
Sbjct:  174 IHQEHYIEEVLKKFQCEHWKVVPTPARDSITLHKGQSPTTDEERARMAKMPYRQVVGSLMWLTVCTRPDLAQALGACARFSANP 257          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1076.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5JR13_9PHAE2.910e-637.97Integrase catalytic domain-containing protein n=1 ... [more]
UPI001D05617A5.490e-636.47reverse transcriptase (RNA-dependent DNA polymeras... [more]
A0A0J7K6V4_LASNI7.450e-633.33Integrase core domain protein n=1 Tax=Lasius niger... [more]
A0A6H5JWK8_9PHAE1.330e-536.71Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI001D0580711.610e-536.71reverse transcriptase (RNA-dependent DNA polymeras... [more]
B8MN30_TALSN1.900e-538.46Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A4ZE01_9STRA2.660e-531.65Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
UPI001D0401F33.470e-536.71reverse transcriptase (RNA-dependent DNA polymeras... [more]
A0A6V7LZ10_9HYME3.760e-540.00Uncharacterized protein (Fragment) n=1 Tax=Bracon ... [more]
A0A2D7NJ42_9PLAN4.810e-533.33CCHC-type domain-containing protein (Fragment) n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1076contigA-nodosum_M_contig1076:138937..139176 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1076.3.1mRNA_A-nodosum_M_contig1076.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1076 138916..139176 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1076.3.1 ID=prot_A-nodosum_M_contig1076.3.1|Name=mRNA_A-nodosum_M_contig1076.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=80bp
MNQKAFAKNMIEQYNISATLNIPGSPGVDLGRRKYGEPGGNEEFPKYRAL
VGSLMWLLVMTRSDIANAFRACARHSHNPS
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