prot_A-nodosum_M_contig1073.26.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1073.26.1
Unique Nameprot_A-nodosum_M_contig1073.26.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length87
Homology
BLAST of mRNA_A-nodosum_M_contig1073.26.1 vs. uniprot
Match: D7FLF6_ECTSI (Putative far-red impaired response protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF6_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 5.020e-31
Identity = 58/87 (66.67%), Postives = 70/87 (80.46%), Query Frame = 0
Query:    1 MFGTTSLLSFSGLVENVPIDAVVKVMYKYK-ESNASHTVVIGPNGFQMCSCLQVLRCGLPCRHTVAALVTELKRADEFKGESIHPRW 86
            MFGTTSL SF  LVE V ID +VKV+YK+K +    H V++GP GFQ+C+CLQ+LR GL CRH +AALVT LKR+DEFKG+SIHPRW
Sbjct:  413 MFGTTSLHSFCRLVECVEIDCIVKVLYKHKPDRKVGHLVIVGPGGFQLCTCLQLLRRGLQCRHVLAALVTRLKRSDEFKGQSIHPRW 499          
BLAST of mRNA_A-nodosum_M_contig1073.26.1 vs. uniprot
Match: A0A6H5JEJ0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ0_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 1.270e-28
Identity = 55/90 (61.11%), Postives = 67/90 (74.44%), Query Frame = 0
Query:    1 MFGTTSLLSFSGLVENVPIDAVVKVMYKY----KESNASHTVVIGPNGFQMCSCLQVLRCGLPCRHTVAALVTELKRADEFKGESIHPRW 86
            M+GTTSL SF+ LV NV I+AVV+V YKY    +    SH VV+GP GFQ+C+CL+++RCGLPC H  AALVT L RA +F G SIHPRW
Sbjct:  458 MYGTTSLPSFAELVRNVGIEAVVQVQYKYPRTARRGKVSHIVVVGPKGFQLCTCLKLMRCGLPCSHVFAALVTRLDRASDFIGASIHPRW 547          
BLAST of mRNA_A-nodosum_M_contig1073.26.1 vs. uniprot
Match: A0A6H5JJS4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJS4_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 1.340e-28
Identity = 55/90 (61.11%), Postives = 67/90 (74.44%), Query Frame = 0
Query:    1 MFGTTSLLSFSGLVENVPIDAVVKVMYKY----KESNASHTVVIGPNGFQMCSCLQVLRCGLPCRHTVAALVTELKRADEFKGESIHPRW 86
            M+GTTSL SF+ LV NV I+AVV+V YKY    +    SH VV+GP GFQ+C+CL+++RCGLPC H  AALVT L RA +F G SIHPRW
Sbjct:  804 MYGTTSLPSFAELVRNVGIEAVVQVQYKYPRTARRGKVSHIVVVGPKGFQLCTCLKLMRCGLPCSHVFAALVTRLDRASDFIGASIHPRW 893          
BLAST of mRNA_A-nodosum_M_contig1073.26.1 vs. uniprot
Match: A0A6H5K454_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K454_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 1.050e-26
Identity = 58/89 (65.17%), Postives = 68/89 (76.40%), Query Frame = 0
Query:    1 MFGTTSLLSFSGLVENVPI---DAVVKVMYKYKESNASHTVVIGPNGFQMCSCLQVLRCGLPCRHTVAALVTELKRADEFKGESIHPRW 86
            MFGTT L SF  LV +V I   DAVVKV+YK ++    H VVIGP+GFQ+C+CLQ++R GL CRH +AALVTEL RA EFKGE IHPRW
Sbjct: 1238 MFGTTCLQSFYRLVAHVDIYMGDAVVKVVYKRRK--VGHLVVIGPDGFQLCACLQLMRRGLQCRHVLAALVTELDRASEFKGEFIHPRW 1324          
BLAST of mRNA_A-nodosum_M_contig1073.26.1 vs. uniprot
Match: A0A6H5K6K4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K4_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 7.410e-25
Identity = 51/85 (60.00%), Postives = 57/85 (67.06%), Query Frame = 0
Query:    2 FGTTSLLSFSGLVENVPIDAVVKVMYKYKESNASHTVVIGPNGFQMCSCLQVLRCGLPCRHTVAALVTELKRADEFKGESIHPRW 86
            FG   L SF  LV NV IDA VKV YKY+    SH VV+GP+ FQMC+CLQV+R G  CRH +AALV    R  EF G SIHPRW
Sbjct:   67 FGAICLQSFFRLVANVKIDAGVKVSYKYRSPTVSHLVVLGPDRFQMCTCLQVMRRGWQCRHVLAALVRS-NRDSEFAGASIHPRW 150          
BLAST of mRNA_A-nodosum_M_contig1073.26.1 vs. uniprot
Match: A0A6H5KBY4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBY4_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 1.620e-17
Identity = 43/95 (45.26%), Postives = 56/95 (58.95%), Query Frame = 0
Query:    1 MFGTTSLLSFSGLVENVPIDAVVKVMYKYKESNASHTVVIGPNGFQMCSCLQVLRCGLPCRHTVAALVTELKRADE---------FKGESIHPRW 86
            M+  TSL +F  L+E++PI+ VV V YK+  +  SH VV GP+ F +CSCLQ+LR  LPCRH  A LV  + R  E         F G  +H RW
Sbjct:  924 MWARTSLSAFLDLIEDIPIELVVAVRYKWTANRPSHLVVFGPHNFHLCSCLQLLRRRLPCRHYFAVLVNLIGRTGESDEMAFTHTFNGACVHNRW 1018          
BLAST of mRNA_A-nodosum_M_contig1073.26.1 vs. uniprot
Match: A0A6H5KB76_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB76_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 4.120e-17
Identity = 42/95 (44.21%), Postives = 55/95 (57.89%), Query Frame = 0
Query:    1 MFGTTSLLSFSGLVENVPIDAVVKVMYKYKESNASHTVVIGPNGFQMCSCLQVLRCGLPCRHTVAALVTELKRADE---------FKGESIHPRW 86
            M+  T L +F  L+E++PI+ VV V YK+  +  SH VV G + F +CSCLQ+LRCGLPCR   A LV  + R  E         F G  +H RW
Sbjct:  514 MWARTLLSAFLDLIEDIPIELVVAVRYKWTANRPSHLVVFGHHNFHLCSCLQLLRCGLPCRDYFAVLVNLIGRTGESDEMAFTHTFNGSCVHNRW 608          
BLAST of mRNA_A-nodosum_M_contig1073.26.1 vs. uniprot
Match: A0A6H5K9T1_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9T1_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 5.650e-17
Identity = 43/95 (45.26%), Postives = 54/95 (56.84%), Query Frame = 0
Query:    1 MFGTTSLLSFSGLVENVPIDAVVKVMYKYKESNASHTVVIGPNGFQMCSCLQVLRCGLPCRHTVAALVTELKRADE---------FKGESIHPRW 86
            M+   SL +F  L+E++PI  VV V Y    +  SH VV GP+ F +CSCLQ+LR GLPCRH  A LV  + R  E         FKG  +H RW
Sbjct: 1147 MWARASLSAFLDLIEDIPIQLVVAVRYMRAANRPSHLVVFGPHNFHLCSCLQLLRRGLPCRHYFAVLVNLIGRTGESDEMAFIHTFKGACVHNRW 1241          
BLAST of mRNA_A-nodosum_M_contig1073.26.1 vs. uniprot
Match: A0A6H5L372_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L372_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 4.610e-16
Identity = 42/95 (44.21%), Postives = 54/95 (56.84%), Query Frame = 0
Query:    1 MFGTTSLLSFSGLVENVPIDAVVKVMYKYKESNASHTVVIGPNGFQMCSCLQVLRCGLPCRHTVAALVTELKRADE---------FKGESIHPRW 86
            M+  TSL +F  L+E++PI+  V V YK   +  SH VV G + F +CSCLQ+LR GLPCRH  A LV  + R  E         F G  +H RW
Sbjct:  237 MWARTSLSAFLDLIEDIPIELFVAVRYKRAANRPSHLVVFGLHNFHLCSCLQLLRRGLPCRHYFAVLVNLIGRTGESDEMAFTHTFNGACVHNRW 331          
BLAST of mRNA_A-nodosum_M_contig1073.26.1 vs. uniprot
Match: A0A6H5KTX9_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTX9_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 3.050e-15
Identity = 40/87 (45.98%), Postives = 51/87 (58.62%), Query Frame = 0
Query:    5 TSLLSFSGLVENVPIDAVVKVMYKYKESNASHTVVIGPNGFQMCSCLQVLRCGLPCRHTVAALVTELKRA-----DEFKGESIHPRW 86
            TS  +F  L+ NVPI   V V Y+   +  SH +V GPN F +CSCL++LR GLPCRH  AAL+  L         +F G S+H RW
Sbjct:  187 TSSSTFLELLGNVPIHLAVLVRYQLTRTKQSHIIVFGPNNFHLCSCLKLLRLGLPCRHYFAALLRFLGGVYRGIRHDFHGSSVHNRW 273          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1073.26.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D7FLF6_ECTSI5.020e-3166.67Putative far-red impaired response protein n=1 Tax... [more]
A0A6H5JEJ0_9PHAE1.270e-2861.11SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JJS4_9PHAE1.340e-2861.11SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K454_9PHAE1.050e-2665.17SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K6K4_9PHAE7.410e-2560.00SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KBY4_9PHAE1.620e-1745.26SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KB76_9PHAE4.120e-1744.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9T1_9PHAE5.650e-1745.26SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L372_9PHAE4.610e-1644.21SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KTX9_9PHAE3.050e-1545.98SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 36..71
score: 9.334374

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1073contigA-nodosum_M_contig1073:263460..263720 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1073.26.1mRNA_A-nodosum_M_contig1073.26.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1073 263460..263727 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1073.26.1 ID=prot_A-nodosum_M_contig1073.26.1|Name=mRNA_A-nodosum_M_contig1073.26.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=87bp
MFGTTSLLSFSGLVENVPIDAVVKVMYKYKESNASHTVVIGPNGFQMCSC
LQVLRCGLPCRHTVAALVTELKRADEFKGESIHPRW*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007527Znf_SWIM