prot_A-nodosum_M_contig1073.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1073.2.1
Unique Nameprot_A-nodosum_M_contig1073.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length99
Homology
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BLAST of mRNA_A-nodosum_M_contig1073.2.1 vs. uniprot
Match: A0A6H5L144_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L144_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 1.710e-6
Identity = 32/91 (35.16%), Postives = 52/91 (57.14%), Query Frame = 0 
Query:    9 ERIKTTIRERQLGFAGGLIRQGDSRLSKRVMIWRLAVQGPKRGDRPATSWISCLQKNLEAFGAIQRKGKGRKWVAYGAIAKDGRDWMTAVK 99
            E I+ T+R+R+L FAG ++R GD+RL KR+++  +A     RG + +  W+  L ++L AFG  + K  GR    +   AKD   W   ++
Sbjct:  785 ETIEATVRKRRLCFAGFVMRMGDNRLPKRMLLGAMAGGTGYRGGQES-DWVYRLGEDLVAFGMKEEKEGGR----WKESAKDQEAWYDKIE 870
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BLAST of mRNA_A-nodosum_M_contig1073.2.1 vs. uniprot
Match: A0A6H5JP02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP02_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 8.060e-6
Identity = 33/91 (36.26%), Postives = 51/91 (56.04%), Query Frame = 0 
Query:    9 ERIKTTIRERQLGFAGGLIRQGDSRLSKRVMIWRLAVQGPKRGDRPATSWISCLQKNLEAFGAIQRKGKGRKWVAYGAIAKDGRDWMTAVK 99
            E I+ T+R+R+L FAG ++R GD+RL K +++  +A     RG + +  W+S L ++L AF     K +G KW      AKD   W   V+
Sbjct:  654 ETIEATVRKRRLCFAGFIMRMGDNRLPKHMLLGAMAGGVGYRGGQES-DWVSRLGEDLVAFNMGDEK-EGGKWKE---SAKDPEVWYNKVE 739
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1073.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L144_9PHAE1.710e-635.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JP02_9PHAE8.060e-636.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1073contigA-nodosum_M_contig1073:40272..40568 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1073.2.1mRNA_A-nodosum_M_contig1073.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1073 40272..40568 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1073.2.1 ID=prot_A-nodosum_M_contig1073.2.1|Name=mRNA_A-nodosum_M_contig1073.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=99bp
EVLKRTGSERIKTTIRERQLGFAGGLIRQGDSRLSKRVMIWRLAVQGPKR
GDRPATSWISCLQKNLEAFGAIQRKGKGRKWVAYGAIAKDGRDWMTAVK
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