prot_A-nodosum_M_contig1073.17.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1073.17.1
Unique Nameprot_A-nodosum_M_contig1073.17.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length115
Homology
BLAST of mRNA_A-nodosum_M_contig1073.17.1 vs. uniprot
Match: A0A6H5JMA1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA1_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 3.840e-10
Identity = 32/76 (42.11%), Postives = 44/76 (57.89%), Query Frame = 0
Query:    1 MEDKRLPKYVMFGEMVGGAGCVGGQEKEWMACFLDNLRAFGINADQS----TTAAQDEGEWRRTAEQGVEHFMAKW 72
            MED RLPK ++ GEM GGAG  GGQE +W+    ++L AFG+  ++       +A+D+  W    E G   FM KW
Sbjct:  144 MEDNRLPKRMLLGEMAGGAGYRGGQESDWVYRLGEDLVAFGMKEEKEGGRWKESAKDQEAWYDKIEDGAAWFMRKW 219          
BLAST of mRNA_A-nodosum_M_contig1073.17.1 vs. uniprot
Match: UPI00165228C0 (uncharacterized protein LOC118478942 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00165228C0)

HSP 1 Score: 57.8 bits (138), Expect = 2.660e-8
Identity = 32/83 (38.55%), Postives = 43/83 (51.81%), Query Frame = 0
Query:    1 MEDKRLPKYVMFGEMVGGAGCVGGQEKEWMACFLDNLRAFGINADQSTTAAQDEGEWRRTAEQGVEHFMAKWIVAEKAKARLR 83
            M D RLPK +M+GE++ G   VGGQ+K +  C   +L+  GI  D     AQD   WR    +G +   AK I   K K  +R
Sbjct:    1 MADSRLPKQLMYGELLHGKRSVGGQKKRFKDCLKISLKELGILNDSWEMLAQDRPSWRCKLTKGAKAAEAKRIAEAKQKHNVR 83          
BLAST of mRNA_A-nodosum_M_contig1073.17.1 vs. uniprot
Match: A0A6H5JHK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHK9_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 5.040e-8
Identity = 29/76 (38.16%), Postives = 41/76 (53.95%), Query Frame = 0
Query:    1 MEDKRLPKYVMFGEMVGGAGCVGGQEKEWMACFLDNLRAFGINADQS----TTAAQDEGEWRRTAEQGVEHFMAKW 72
            MED RLPK ++ GEM  G G  GGQE +W++   ++L AF +  ++       +A+D   W    E G   FM KW
Sbjct:  121 MEDSRLPKRMLLGEMARGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKDSEVWYNKVEDGAAWFMRKW 196          
BLAST of mRNA_A-nodosum_M_contig1073.17.1 vs. uniprot
Match: UPI00035A230D (uncharacterized protein LOC101847595 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00035A230D)

HSP 1 Score: 57.0 bits (136), Expect = 4.470e-7
Identity = 32/83 (38.55%), Postives = 43/83 (51.81%), Query Frame = 0
Query:    1 MEDKRLPKYVMFGEMVGGAGCVGGQEKEWMACFLDNLRAFGINADQSTTAAQDEGEWRRTAEQGVEHFMAKWIVAEKAKARLR 83
            M D RLPK +M+GE++ G   V GQ+K +  C   +L+  GI  D   T AQD   WR    +G +   AK I   K K  +R
Sbjct:  530 MADSRLPKQLMYGELLHGKRSVRGQKKRFKDCLKVSLKELGILNDLCETLAQDRPTWRCKLTKGAKAAEAKRIAEAKQKRNVR 612          
BLAST of mRNA_A-nodosum_M_contig1073.17.1 vs. uniprot
Match: A0A6H5KF72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF72_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 5.210e-6
Identity = 36/98 (36.73%), Postives = 45/98 (45.92%), Query Frame = 0
Query:    3 DKRLPKYVMFGEMVGGAGCV-GGQEKEWMACFLDNLRAF--------------GINADQSTTAAQDEG--EWRRTAEQGVEHFMAKWIVAEKAKARLR 83
            D RLPK +MFGE+VGG     G  E+ W+ C  D+L+ F              GI       AA+ EG   W     QG E FMA W   E+  +R R
Sbjct:   71 DGRLPKRLMFGELVGGENPGRGSPEQNWLICLKDDLKMFEARHGSTPDKRSFFGIPKPDWDEAAKVEGGVPWHAGVLQGAERFMASWHKGEEKASRQR 168          
BLAST of mRNA_A-nodosum_M_contig1073.17.1 vs. uniprot
Match: A0A6H5JEX7_9PHAE (Reverse transcriptase domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX7_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 7.450e-6
Identity = 35/98 (35.71%), Postives = 48/98 (48.98%), Query Frame = 0
Query:    3 DKRLPKYVMFGEMVGGAGC-VGGQEKEWMACFLDNLRAF----GINADQSTT----------AAQDEG--EWRRTAEQGVEHFMAKWIVAEKAKARLR 83
            D RLPK +MFGE+VGG G   G  E+ W+ C  D+++ F    G   D+ +           AA+ EG   W     QG E FMA W   ++  +R R
Sbjct:  660 DGRLPKRLMFGELVGGEGPGQGNPEQNWLTCLKDDMKMFEARYGSTTDKPSVFGVPKLVWSEAAKVEGGVPWHAGVLQGAERFMASWHKGKEEASRQR 757          
BLAST of mRNA_A-nodosum_M_contig1073.17.1 vs. uniprot
Match: A0A6H5KA81_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA81_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 9.950e-6
Identity = 36/98 (36.73%), Postives = 45/98 (45.92%), Query Frame = 0
Query:    3 DKRLPKYVMFGEMVGGAGCV-GGQEKEWMACFLDNLRAF--------------GINADQSTTAAQDEG--EWRRTAEQGVEHFMAKWIVAEKAKARLR 83
            D RLPK +MFGE+VGG     G  E+ W+ C  D+L+ F              GI       AA+ EG   W     QG E FMA W   E+  +R R
Sbjct:  492 DGRLPKRLMFGELVGGENPGRGSPEQNWLICLKDDLKMFEARHGSTPDKRSFFGIPKPDWDEAAKVEGGVPWHAGVLQGAERFMASWHKGEEKASRQR 589          
BLAST of mRNA_A-nodosum_M_contig1073.17.1 vs. uniprot
Match: A0A6H5JKI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKI4_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 1.010e-5
Identity = 36/98 (36.73%), Postives = 45/98 (45.92%), Query Frame = 0
Query:    3 DKRLPKYVMFGEMVGGAGCV-GGQEKEWMACFLDNLRAF--------------GINADQSTTAAQDEG--EWRRTAEQGVEHFMAKWIVAEKAKARLR 83
            D RLPK +MFGE+VGG     G  E+ W+ C  D+L+ F              GI       AA+ EG   W     QG E FMA W   E+  +R R
Sbjct:  598 DGRLPKRLMFGELVGGENPGRGSPEQNWLICLKDDLKMFEARHGSTPDKRSFFGIPKPDWDEAAKVEGGVPWHAGVLQGAERFMASWHKGEEKASRQR 695          
BLAST of mRNA_A-nodosum_M_contig1073.17.1 vs. uniprot
Match: A0A6H5JMY1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMY1_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 1.110e-5
Identity = 35/98 (35.71%), Postives = 44/98 (44.90%), Query Frame = 0
Query:    3 DKRLPKYVMFGEMVGGAGCV-GGQEKEWMACFLDNLRAF--------------GINADQSTTAAQDEG--EWRRTAEQGVEHFMAKWIVAEKAKARLR 83
            D RLPK +MFGE+VGG     G  E+ W+ C  D+L+ F              GI       A + EG   W     QG E FMA W   E+  +R R
Sbjct:   23 DGRLPKRLMFGELVGGENPGRGSPEQNWLICLKDDLKMFEARHGSTPDKRSFFGIPKPDWDDAEEVEGGVPWHAGVLQGAERFMASWHKGEEKASRQR 120          
BLAST of mRNA_A-nodosum_M_contig1073.17.1 vs. uniprot
Match: A0A6H5JKD2_9PHAE (Reverse transcriptase domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKD2_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 1.200e-5
Identity = 36/98 (36.73%), Postives = 45/98 (45.92%), Query Frame = 0
Query:    3 DKRLPKYVMFGEMVGGAGCV-GGQEKEWMACFLDNLRAF--------------GINADQSTTAAQDEG--EWRRTAEQGVEHFMAKWIVAEKAKARLR 83
            D RLPK +MFGE+VGG     G  E+ W+ C  D+L+ F              GI       AA+ EG   W     QG E FMA W   E+  +R R
Sbjct:  185 DGRLPKRLMFGELVGGENPGRGSPEQNWLICLKDDLKMFEARHGSTPDKRSFFGILKPDWDEAAKVEGGVPWHAGVLQGAERFMASWHKGEEKASRQR 282          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1073.17.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5JMA1_9PHAE3.840e-1042.11Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
UPI00165228C02.660e-838.55uncharacterized protein LOC118478942 n=1 Tax=Aplys... [more]
A0A6H5JHK9_9PHAE5.040e-838.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI00035A230D4.470e-738.55uncharacterized protein LOC101847595 n=1 Tax=Aplys... [more]
A0A6H5KF72_9PHAE5.210e-636.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEX7_9PHAE7.450e-635.71Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KA81_9PHAE9.950e-636.73Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JKI4_9PHAE1.010e-536.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMY1_9PHAE1.110e-535.71Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JKD2_9PHAE1.200e-536.73Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1073contigA-nodosum_M_contig1073:95103..95447 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1073.17.1mRNA_A-nodosum_M_contig1073.17.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1073 93730..95623 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1073.17.1 ID=prot_A-nodosum_M_contig1073.17.1|Name=mRNA_A-nodosum_M_contig1073.17.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=115bp
MEDKRLPKYVMFGEMVGGAGCVGGQEKEWMACFLDNLRAFGINADQSTTA
AQDEGEWRRTAEQGVEHFMAKWIVAEKAKARLRHAVVCSNVTRRTKKRIA
QGKRARAGSLALVD*
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