prot_A-nodosum_M_contig107.8.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig107.8.1
Unique Nameprot_A-nodosum_M_contig107.8.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length279
Homology
BLAST of mRNA_A-nodosum_M_contig107.8.1 vs. uniprot
Match: D8LNW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNW7_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 9.690e-21
Identity = 75/241 (31.12%), Postives = 114/241 (47.30%), Query Frame = 0
Query:   33 VTRGAPSDGMDHIITVGGQRKWWWQSGPVDSCCFCFPLEVGIVILAGMDVAASSFLLWMFEL--VKDMMNTAATNLELIMEREKYENSCSGDSPTMTENECQLLEQQLKFLQSGLNVYQHPPAIFYVYEYIMYIILLVGLAGGVXGLVAGCGSNTLAAKLFFWSCLPGLFLR-TASLTVWFVTGQIG-----SISIVFWVLNAVYYFFAIYFAKVSWSYYAVLKARDVNTSPGVGSAVELR 265
            V +  P DG       G +R+WWWQ GPVDSCCFC  L  G+ ILA  D+  +      +    ++ M++ A   L+ +     Y+  C  D+P  TE+ C  L   ++  +  + ++ + P I YV         ++ +  G  GL A   SN L+AK++ W  LP  F+   A  T+  V  Q G        +V   L  V  F  +YF KV+WS++  LKAR  N+S   G    ++
Sbjct:    8 VEQEEPVDGARFNGEGGVRRQWWWQPGPVDSCCFCCSLRAGVGILAANDLFLNGIWSTFYSRSHIEKMLHAAIEILQSV-----YDKDCK-DAPVQTED-CLQLSHNIEQAEFEVELFDNLPVIVYVEA-------IIAMLAGAVGLFAVFKSNALSAKIYLWMWLPRFFVGLVAKYTLRAVMKQYGIDNSDGPGVVIGHLVDVVVF--LYFVKVAWSFHQRLKARSGNSSSPSGGVESIQ 232          
BLAST of mRNA_A-nodosum_M_contig107.8.1 vs. uniprot
Match: D8LNW6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNW6_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 1.610e-7
Identity = 66/248 (26.61%), Postives = 95/248 (38.31%), Query Frame = 0
Query:   25 YLPVSGDDVTRGAPSDGMDHIITVGGQRK-WWWQSGPVDSCCFCFPLEVGIVILAGMDVAASSFLLWMFELVKDMMNTAATNLELIMEREKYENSCSGDSPTMTENECQLLEQQLKFLQSGLNVYQHPPAIFYVYEYIMYIILLVGLAGGVXGLVAGCGSNTLAAKLFFWSCLPGLFLRTASLT---VWFVTGQIGSISIVFWVLNAVYYFFAIYFAKVSWSYYAVLKA--RDVNTSPGVGSAVELRG 266
            Y+PV G +   G P         VGG RK WWWQ GPVDS    F L  G+ +LA +D+     +   +  V  +   A     L    +KY   C      + E     L Q    L        + PA+            ++    G  GL A    + LAA+ + WS  P + L    L    + F    +G +     V N        Y  KV+WSY+ V++   R   T+     ++EL G
Sbjct:   11 YVPV-GSEFDGGRPLGERVRFNGVGGVRKDWWWQPGPVDSXXXXFSLAAGVAVLAALDIIVLGAMRLYY--VSFVTGDAGLKQLLAGFEKKYAEECED----VAEASADCLAQASIILSLNKTNDLYVPAVLQG---------VIAAIFGFVGLRAVFAHDALAARAYLWSWPPRIVLTLVELVMQRIRFERYDMGFLWGFTVVWNIPRVLILAYCLKVAWSYWVVVRRNNRAAATAADTSGSIELDG 242          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig107.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LNW7_ECTSI9.690e-2131.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNW6_ECTSI1.610e-726.61Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig107contigA-nodosum_M_contig107:327074..353198 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig107.8.1mRNA_A-nodosum_M_contig107.8.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig107 326655..353251 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig107.8.1 ID=prot_A-nodosum_M_contig107.8.1|Name=mRNA_A-nodosum_M_contig107.8.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=279bp
MSHKLLKKEADKMAHDTSASVRVRYLPVSGDDVTRGAPSDGMDHIITVGG
QRKWWWQSGPVDSCCFCFPLEVGIVILAGMDVAASSFLLWMFELVKDMMN
TAATNLELIMEREKYENSCSGDSPTMTENECQLLEQQLKFLQSGLNVYQH
PPAIFYVYEYIMYIILLVGLAGGVAGLVAGCGSNTLAAKLFFWSCLPGLF
LRTASLTVWFVTGQIGSISIVFWVLNAVYYFFAIYFAKVSWSYYAVLKAR
DVNTSPGVGSAVELRGISDGDWRSGATV*
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