prot_A-nodosum_M_contig107.30.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig107.30.1
Unique Nameprot_A-nodosum_M_contig107.30.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length378
Homology
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BLAST of mRNA_A-nodosum_M_contig107.30.1 vs. uniprot
Match: D7G1Q9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Q9_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 2.430e-23
Identity = 70/176 (39.77%), Postives = 94/176 (53.41%), Query Frame = 0 
Query:  127 VNGGVLNVGEGATVLFEGFTRCVGVSIVSARN-DGDFSDHLVFGGCWYNEGTIRVEDQAIFNDNDNSGGGESFPGNGGAVFNGASASIEFGGGIEAKRNVCYDDFGGRGGAIYNEGSIVVSKSAVFSRNLAEAGGAIYNDQNATFNFETEDTVSFWNNRQLDNNGGHVYNSGSMKF 301
            V+GG + VGEG+TV F    +   V I++ R+ D DF+  +  GGC +  G  RV+ +A F   D  G GES PG GGAV+ G + S+ F  G+        DDFGG+GG IYN G + +   + F    A AG AIYN + ATFNF       F +    D+ G  + N G  KF
Sbjct:   85 VDGGAVYVGEGSTVRFLNDVQMRDVVIINERDEDSDFASFVRSGGCVWTAGYFRVDGEATFTGCDIIGAGESPPGPGGAVYVGETGSVLFNEGVTITETSITDDFGGKGGGIYNLGKVNIKGDSRFEEISASAGVAIYNGEGATFNFRNGAGAFFRDLNNRDSEGSALVNLGFFKF 260
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BLAST of mRNA_A-nodosum_M_contig107.30.1 vs. uniprot
Match: D7G0Q4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Q4_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 9.550e-19
Identity = 70/184 (38.04%), Postives = 97/184 (52.72%), Query Frame = 0 
Query:  125 QDVNGGVLNVGEGATVLFEGFTRCVGVSIVSARNDGDFSDHLVF---GGCWYNEGTIRVEDQAIFNDNDNSGGGESFPGNGGAVFNGASASIEFGGGIEAKRNVCYDDFGGRGGAIYNEGSIVVSKSAVFSRNLAEAGGAIYNDQNATFNFETEDTVSFWNNRQLDNNGGHVYNSGSMKFDSYV 305
             +VNGG + VGEG+TV F    +   V I + R DGD SD+ VF   GGC +  G  RV+ +A F      G GES PG+GGAVF  A+ S+ F  G+        +D GG GG I+N G + +   + F    A +G AI+N ++A+FNF    +  F +    D+ G  + N G  KF   V
Sbjct:  111 NNVNGGGVFVGEGSTVRFLNDVQIRDVRITNER-DGD-SDNAVFVRDGGCVWTAGFFRVDGEATFTSCAIIGTGESPPGSGGAVFVDATGSVLFNQGVAISDTFITNDGGGDGGGIFNLGKVNIKGDSRFEELSARSGAAIFNGEDASFNFRNGASAFFRDLSNRDSEGSALVNLGFFKFSGPV 292
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig107.30.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1Q9_ECTSI2.430e-2339.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0Q4_ECTSI9.550e-1938.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig107contigA-nodosum_M_contig107:850999..879317 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig107.30.1mRNA_A-nodosum_M_contig107.30.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig107 850878..882967 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig107.30.1 ID=prot_A-nodosum_M_contig107.30.1|Name=mRNA_A-nodosum_M_contig107.30.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=378bp
MTSTLLAGAFCLFCLAARLPVGVGLQDVFVSSCSDLSVLADAIQEDDVNA
TVVNNLSCDDEWTTVVVPSNRKLRVEAEKPTWRVKFTNIRFVVEARETSG
DWDCTFAINSKFFSTIDADSGLAIQDVNGGVLNVGEGATVLFEGFTRCVG
VSIVSARNDGDFSDHLVFGGCWYNEGTIRVEDQAIFNDNDNSGGGESFPG
NGGAVFNGASASIEFGGGIEAKRNVCYDDFGGRGGAIYNEGSIVVSKSAV
FSRNLAEAGGAIYNDQNATFNFETEDTVSFWNNRQLDNNGGHVYNSGSMK
FDSYVKMLRGNTIFTNGLMEFSGGALLKRISEGAVFASDGWDFGDTLPLI
TFKNNEANSAGCEDLYYFSDGEFLCGP*
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