prot_A-nodosum_M_contig1067.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1067.3.1
Unique Nameprot_A-nodosum_M_contig1067.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length211
Homology
BLAST of mRNA_A-nodosum_M_contig1067.3.1 vs. uniprot
Match: A0A6H5JG29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG29_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 1.340e-22
Identity = 59/134 (44.03%), Postives = 75/134 (55.97%), Query Frame = 0
Query:   23 VCSNGLAGVEIADVCCMAECGRCGGAGCGRRAQDAGLTAADCCAGRIRDADVFCVDSEAAPCIIGSGETCSNGFPGIETRGVCCASGCPQCGGSGCGSQAQRVGLSASDCCVGRITSAGELCSDTETAPCIIDE 156
            +CSNG  G++  + CC+AECG CGG+ C   A   GL A +CC   I +    C  +  APC +   +TCSNGFPGI++   CC + C  CGGS C       GL A +CC   I   GELCS    APC +DE
Sbjct:  364 MCSNGFPGIQSGNACCLAECGGCGGSDCD--ALGGGLGAENCCESDIVERGELCSIALEAPCYLE--DTCSNGFPGIQSGNACCLAECGGCGGSDCDQFGD--GLGAENCCESDIVEHGELCSIALEAPCYLDE 491          
BLAST of mRNA_A-nodosum_M_contig1067.3.1 vs. uniprot
Match: D7FY01_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY01_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 2.950e-21
Identity = 55/120 (45.83%), Postives = 65/120 (54.17%), Query Frame = 0
Query:   21 AQVCSNGLAGVEIADVCCMAECGRCGGAGCGRRAQDAGLTAADCCAGRIRDADVFCVDSEAAPCIIGSGETCSNGFPGIETRGVCCASGCPQCGGSGCGSQAQRVGLSASDCCVGRITSA 140
            AQ CSNGLAG E +  CC   CG CGG GC +     G  A  CC   I  A   C +  AAPCI+ + +TCSNG  G E  G CC+ GC  CGG GC     ++G  A+ CC   I SA
Sbjct:  378 AQTCSNGLAGYENSGACCSVGCGTCGGEGCSQL----GEGAESCCTSNIIAAREPCSEKGAAPCIMDTDQTCSNGLAGFENSGACCSVGCGTCGGQGC----SQLGEGAASCCTSNIISA 489          
BLAST of mRNA_A-nodosum_M_contig1067.3.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 7.520e-20
Identity = 65/156 (41.67%), Postives = 81/156 (51.92%), Query Frame = 0
Query:   13 LLLVSSSNAQVCSNGLAGVEIADVCCMAECGRCGGAGCGRRAQDAGLTAADCCAGRIRDADVFC------VDSEAAPCIIGSGETCSNGFP--GIETRGVCCASGCPQCGGSGCGSQAQRVGLSASDCCVGRITSAGELCSDTETAPCIIDEVCGP 160
            LL   SS     S G  G+   DVCC AECG CGG+GCG RA   GLTA +CC   I  A+V C      VD + +P         S  F   G+     CC++GC +CGGSGC  +    GL+ +DCC   I++   LCS T  APCI+D    P
Sbjct:   73 LLEEGSSPTPASSGGCDGILQGDVCCSAECGTCGGSGCGSRA---GLTANECCTSTIAAANVPCGSAPCVVDGDTSPTXXXXXXXXSGSFTCDGVLKGDYCCSAGCVECGGSGCSDRGG--GLTGADCCTSDISN---LCSVTGAAPCIVDGDTSP 220          
BLAST of mRNA_A-nodosum_M_contig1067.3.1 vs. uniprot
Match: D8LRN1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LRN1_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 2.400e-12
Identity = 38/80 (47.50%), Postives = 50/80 (62.50%), Query Frame = 0
Query:   85 IIGSGETCSNGFPGIETRGV-CCASGCPQCGGSGCGSQAQRVGLSASDCCVGRITSAGELCSDTETAPCIIDEVCGPALT 163
            ++  G+TC+NG  GI+  GV CC  GC +C G GC +     GL A  CC   I ++G LCS+T +APCIIDE  GP+ T
Sbjct:   18 VVVQGDTCTNGIEGIDGNGVVCCPLGCGRCAGEGCTAFGSENGLGADSCCGNAIKASGRLCSETGSAPCIIDEE-GPSPT 96          
BLAST of mRNA_A-nodosum_M_contig1067.3.1 vs. uniprot
Match: D7FJ68_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ68_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 1.030e-9
Identity = 35/67 (52.24%), Postives = 40/67 (59.70%), Query Frame = 0
Query:   90 ETCSNGFPGIETRGVCCASGCPQCGGSGCGSQAQRVGLSASDCCVGRITSAGELCSDTETAPCIIDE 156
            +TCSNGFPGI++   CC + C  CGGS C   A   GL A +CC   I   GELCS    APC IDE
Sbjct:  648 DTCSNGFPGIQSGNACCLAECGGCGGSDC--DALGGGLGAENCCESDIVEHGELCSIALEAPCYIDE 712          
BLAST of mRNA_A-nodosum_M_contig1067.3.1 vs. uniprot
Match: D7G651_ECTSI (Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G651_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 1.600e-9
Identity = 31/66 (46.97%), Postives = 42/66 (63.64%), Query Frame = 0
Query:   22 QVCSNGLAGVEI-ADVCCMAECGRCGGAGCGRRAQDAGLTAADCCAGRIRDADVFCVDSEAAPCII 86
            Q CSNG+ G++   +VCC   CG+CGG+GCG      GL  A CC+  +   +V+C D+ AAPCII
Sbjct:  681 QTCSNGIEGIDHKGEVCCPLACGQCGGSGCGSAGSANGLDGASCCSSEVLAGNVYCEDTNAAPCII 746          
BLAST of mRNA_A-nodosum_M_contig1067.3.1 vs. uniprot
Match: A0A6H5JUS5_9PHAE (MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS5_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 9.800e-9
Identity = 30/71 (42.25%), Postives = 43/71 (60.56%), Query Frame = 0
Query:   17 SSSNAQVCSNGLAGVEI-ADVCCMAECGRCGGAGCGRRAQDAGLTAADCCAGRIRDADVFCVDSEAAPCII 86
            S+ + Q CSNG+ G++   +VCC   CG+CGG GCG       L    CC+ ++   +V+C D+ AAPCII
Sbjct:  653 SADDTQTCSNGIEGIDHKGEVCCPLACGQCGGTGCGSAGSAFELDGESCCSSQVLAGNVYCEDTNAAPCII 723          
BLAST of mRNA_A-nodosum_M_contig1067.3.1 vs. uniprot
Match: D7FZM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZM1_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 4.160e-8
Identity = 36/104 (34.62%), Postives = 47/104 (45.19%), Query Frame = 0
Query:   20 NAQVCSNGLAGVEIADVCCMAECGRCGGAGCGRRAQDAGLTAADCCAGRIRDADVFCVDSEAAPCII------------GSG-----ETCSNGFPGIETRGVCC 106
                CSNG+ G +    CC A CG+CGG GCG     AG +A  CC+  +  A   C  +  +PC+I            GS        CSNG PG +   +CC
Sbjct:  451 GTSTCSNGILGYQDGPACCAANCGQCGGGGCGSVPGTAGASA--CCSSDVELAGNLCSATGVSPCVIDNYTPAPVVPDYGSAAPVVPSNCSNGLPGYQNNDICC 552          
BLAST of mRNA_A-nodosum_M_contig1067.3.1 vs. uniprot
Match: A0A6H5K6S4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6S4_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 4.510e-7
Identity = 33/73 (45.21%), Postives = 41/73 (56.16%), Query Frame = 0
Query:   19 SNAQVCSNGLAGVEIADVCCMAECGRCGGAGCGRRAQDAGLTAADCCAGRIRDADVFCVDSEAAPCIIGSGET 91
            S   +CSNG +G++  + CC+AECG CGG GCG      GL A  CC   I +    C  + AAPC I  GET
Sbjct:  441 SELDMCSNGFSGIQSGNACCLAECGECGGHGCGEFG--GGLGADKCCESDIEEYGELCSIALAAPCYI-DGET 510          
BLAST of mRNA_A-nodosum_M_contig1067.3.1 vs. uniprot
Match: D7FJ69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ69_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 1.390e-6
Identity = 31/67 (46.27%), Postives = 36/67 (53.73%), Query Frame = 0
Query:   23 VCSNGLAGVEIADVCCMAECGRCGGAGCGRRAQDAGLTAADCCAGRIRDADVFCVDSEAAPCIIGSG 89
            VCSNG  G++    CC+AECG CGG GCG      GL A  CC   I +    C  + AAPC I  G
Sbjct:  118 VCSNGFPGIQSGVSCCLAECGECGGRGCGEFG--GGLGADKCCESDIEEYGELCSIALAAPCYIDDG 182          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1067.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5JG29_9PHAE1.340e-2244.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FY01_ECTSI2.950e-2145.83Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D7FWE8_ECTSI7.520e-2041.67Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D8LRN1_ECTSI2.400e-1247.50Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]
D7FJ68_ECTSI1.030e-952.24WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G651_ECTSI1.600e-946.97Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectoca... [more]
A0A6H5JUS5_9PHAE9.800e-942.25MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FZM1_ECTSI4.160e-834.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K6S4_9PHAE4.510e-745.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJ69_ECTSI1.390e-646.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1067contigA-nodosum_M_contig1067:120424..122632 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1067.3.1mRNA_A-nodosum_M_contig1067.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1067 120417..123990 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1067.3.1 ID=prot_A-nodosum_M_contig1067.3.1|Name=mRNA_A-nodosum_M_contig1067.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=211bp
MWPTQWILAMLGLLLVSSSNAQVCSNGLAGVEIADVCCMAECGRCGGAGC
GRRAQDAGLTAADCCAGRIRDADVFCVDSEAAPCIIGSGETCSNGFPGIE
TRGVCCASGCPQCGGSGCGSQAQRVGLSASDCCVGRITSAGELCSDTETA
PCIIDEVCGPALTITLEWEETDSDLDLMVTEPDGSVVSFALMVGVSAHSN
GARLRHVRLF*
back to top