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Homology
BLAST of mRNA_A-nodosum_M_contig1066.8.1 vs. uniprot
Match: D8LB51_ECTSI (SAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB51_ECTSI) HSP 1 Score: 253 bits (647), Expect = 1.780e-67 Identity = 134/203 (66.01%), Postives = 158/203 (77.83%), Query Frame = 0
Query: 189 GRSDPELVARGKALAARVKELGHTGDWKGVLEALEEGPKNAIVCTVAVNALGRMGKWREAVGVVDGMGEDGDGGGGGDRPDAFVYASAINACGKAGRPVEAVALLSEMPSRGVQPDVVCYGAAIAALSEAAGTQNQISWGSK-TDQGGDGSGRAGKGA---EKSMRAHEEAVTFIQHMRRNGPSPNQQCFASAITACARARDP 387
GR DP+ V +GK LAAR+KEL D++G+LEALEEGPKNAIVCTVA+ LG+ GKWREAV V+DGMG+ GDG DRPDAF YA+ INACGKAGRPVEAVALL+EMP+R V+PDVVC+G+AI AL E AGTQN+ +WG K D+GG+G + A K RAHE+A+ IQ MRR GPSPN QC+ASAITACARA DP
Sbjct: 179 GRLDPQTVEKGKMLAARIKELAKARDFEGMLEALEEGPKNAIVCTVAITCLGQAGKWREAVEVLDGMGKGGDGS---DRPDAFAYAATINACGKAGRPVEAVALLTEMPTRRVKPDVVCFGSAIFALGEVAGTQNRSTWGRKGADEGGEGGDKPIASAVADPKPTRAHEKALELIQEMRREGPSPNSQCYASAITACARAHDP 378
BLAST of mRNA_A-nodosum_M_contig1066.8.1 vs. uniprot
Match: A0A6H5KL58_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL58_9PHAE) HSP 1 Score: 230 bits (586), Expect = 3.940e-60 Identity = 125/194 (64.43%), Postives = 146/194 (75.26%), Query Frame = 0
Query: 202 LAARVKELGHTGDWKGVLEALEEGPKNAIVCTVAVNALGRMGKWREAVGVVDGMGEDGDGGGGGDRPDAFVYASAINACGKAGRPVEAVALLSEMPSRGVQPDVVCYGAAIAALSEAAGTQNQISWGSK-TDQGG-------DGSGRAGKGAEKSMRAHEEAVTFIQHMRRNGPSPNQQCFASAITACARARDP 387
LAAR+KEL D++G+LEALEEGPKNAIVCTVA+ LG+ GKWREAV V+DGMG+ GG DRPDAF YA+ INACGKAGRPVEAVALL+EMP+R V+PDVVC+G+AI AL E AGTQN+ +WG K ++GG D A K RAHE+A+ IQ MRR GPSPN QC+ASAITACARA DP
Sbjct: 2 LAARIKELAKARDFEGMLEALEEGPKNAIVCTVAITCLGQAGKWREAVEVLDGMGK-----GGSDRPDAFAYAATINACGKAGRPVEAVALLTEMPTRRVKPDVVCFGSAIFALGEVAGTQNRSTWGRKGANEGGXXXXXXXDMPMAAAVAGPKPTRAHEKALELIQDMRREGPSPNSQCYASAITACARAHDP 190
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR003034 | SAP domain | SMART | SM00513 | sap_9 | coord: 917..951
e-value: 2.8E-8
score: 43.5 |
| IPR003034 | SAP domain | PFAM | PF02037 | SAP | coord: 917..951
e-value: 8.9E-11
score: 41.3 |
| IPR003034 | SAP domain | PROSITE | PS50800 | SAP | coord: 917..951
score: 11.504251 |
| IPR033443 | Pentacotripeptide-repeat region of PRORP | PFAM | PF17177 | PPR_long | coord: 517..672
e-value: 1.1E-13
score: 51.0 |
| IPR002885 | Pentatricopeptide repeat | PFAM | PF13812 | PPR_3 | coord: 360..418
e-value: 4.7E-5
score: 23.4
coord: 674..717
e-value: 0.0061
score: 16.6 |
| IPR002885 | Pentatricopeptide repeat | TIGRFAM | TIGR00756 | TIGR00756 | coord: 548..582
e-value: 1.9E-6
score: 25.7
coord: 408..441
e-value: 0.0026
score: 15.8
coord: 513..546
e-value: 4.1E-7
score: 27.8
coord: 373..406
e-value: 6.3E-5
score: 20.9
coord: 443..476
e-value: 2.9E-8
score: 31.4
coord: 688..718
e-value: 2.8E-4
score: 18.9
coord: 653..687
e-value: 2.3E-4
score: 19.1
coord: 272..305
e-value: 2.2E-7
score: 28.6 |
| IPR002885 | Pentatricopeptide repeat | PFAM | PF01535 | PPR | coord: 232..259
e-value: 0.15
score: 12.4 |
| IPR002885 | Pentatricopeptide repeat | PFAM | PF13041 | PPR_2 | coord: 268..315
e-value: 3.3E-7
score: 30.4
coord: 440..488
e-value: 1.1E-9
score: 38.4 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 651..685
score: 9.569272 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 546..580
score: 11.838262 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 370..404
score: 9.952918 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 476..510
score: 8.670445 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 686..720
score: 10.018685 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 269..303
score: 12.035565 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 511..545
score: 11.706726 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 441..475
score: 12.813817 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 616..650
score: 9.96388 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 581..615
score: 10.13926 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | Tetratricopeptide repeat domain | coord: 196..327
e-value: 1.1E-21
score: 79.0 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | Tetratricopeptide repeat domain | coord: 580..765
e-value: 4.9E-35
score: 123.4
coord: 347..501
e-value: 1.6E-42
score: 148.0 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | Tetratricopeptide repeat domain | coord: 502..577
e-value: 1.1E-16
score: 63.0 |
| IPR036361 | SAP domain superfamily | GENE3D | 1.10.720.30 | SAP domain | coord: 897..956
e-value: 6.4E-14
score: 53.3 |
| IPR036361 | SAP domain superfamily | SUPERFAMILY | 68906 | SAP domain | coord: 915..953 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 733..785 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 876..914 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 95..115 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 877..901 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 76..193 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 325..347 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 767..781 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 823..842 |
| None | No IPR available | PANTHER | PTHR47941 | PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL | coord: 212..515
coord: 520..719
coord: 352..605 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_A-nodosum_M_contig1066.8.1 ID=prot_A-nodosum_M_contig1066.8.1|Name=mRNA_A-nodosum_M_contig1066.8.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=956bp
MLPVVDCHGIIAAYGGGIVSCSTSLARTAEFLLVAPNRPRRQKIPQQHQL
IRATLRSPRDPLRSLGGDHDYHDYSYAYNRRSNDGGASDPSVGGDVPRER
MDRATRGRGGRGRRGGRGEGYQGGGRNTARRGNGGGYGSRLGEGVKEWRV
GGSRGGGRGNGRGGGRGRLGRGGRTGQAYGLGGRDRGRGRSDPELVARGK
ALAARVKELGHTGDWKGVLEALEEGPKNAIVCTVAVNALGRMGKWREAVG
VVDGMGEDGDGGGGGDRPDAFVYASAINACGKAGRPVEAVALLSEMPSRG
VQPDVVCYGAAIAALSEAAGTQNQISWGSKTDQGGDGSGRAGKGAEKSMR
AHEEAVTFIQHMRRNGPSPNQQCFASAITACARARDPSAAIRLVADMRED
GVPPNEVVLNAAVDACGKGGAPDEAVKLLRGMESAYGIKPNNVSYNSAIS
ALSRAGRTREARALLQEMASSGLKPDKVSFSAAMQGFAAAGDRKGAASLS
SEMKDSGVAMDVVSYGTAVSACGKAGDVDGALKLIKEMEKAGIRANVVVY
NAALDACGRAGNPEAAAKILSRMADAGVTPNATSYTGAIAACSRSGDASK
AVEWLEVMSRENVPPEAICYNYAMTACGRSGDAGQATWLLRLMREEGIAP
NRISYSAAMFALGKAGRLQDVLGLLTEMHDEGVEADEVTYHIAVDAASIA
GDLEVAMYLFREMRARGLPVAKRRVEYIREKISKSGGGGGRGAQRSRRPK
SAGAGREQRYAGAKRRPGSSNPQNSGGSLQERKVSVVAPEEAGADFLAEL
REKFSLESEDLIASDNDYDDGKLAELAAEGDPLSPSLQSRPFEESVAAAA
TGANDVEAPLARSVVSVVTDGGGGRIGIEDRAAERAEKESDDREDGRSWS
TSNTDIEDSRALSSQDIKKMKVAELKTELRTKGLRVAGSKAELLARLEEA
LEQPEA back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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