prot_A-nodosum_M_contig1065.42.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1065.42.1
Unique Nameprot_A-nodosum_M_contig1065.42.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length124
Homology
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BLAST of mRNA_A-nodosum_M_contig1065.42.1 vs. uniprot
Match: A0A6H5K873_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K873_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 1.030e-11
Identity = 30/41 (73.17%), Postives = 35/41 (85.37%), Query Frame = 0 
Query:   44 VVTTVTFSRELERIEPTTFCPASANAFSVFVPCGVKPRTNL 84
            VVTTV FSREL+RI+ TTFCPASA AF VFVPCGV P +++
Sbjct:    2 VVTTVVFSRELDRIDSTTFCPASAKAFIVFVPCGVSPVSSV 42
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BLAST of mRNA_A-nodosum_M_contig1065.42.1 vs. uniprot
Match: A0A6H5KLS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLS5_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 3.940e-9
Identity = 34/52 (65.38%), Postives = 35/52 (67.31%), Query Frame = 0 
Query:    1 MKEESVAVYLASGGPFSSDIQSACIRCPLKMMVGFHVVPSALIVVTTVTFSR 52
            M EESV VYLAS G F S  QS   RC LK +VG HV P AL VVTTV FSR
Sbjct:    7 MNEESVHVYLASFGRFLSANQSGWSRCLLKTVVGAHVAPLALTVVTTVVFSR 58
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1065.42.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K873_9PHAE1.030e-1173.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLS5_9PHAE3.940e-965.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1065contigA-nodosum_M_contig1065:256247..256618 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1065.42.1mRNA_A-nodosum_M_contig1065.42.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1065 255991..257290 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1065.42.1 ID=prot_A-nodosum_M_contig1065.42.1|Name=mRNA_A-nodosum_M_contig1065.42.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=124bp
MKEESVAVYLASGGPFSSDIQSACIRCPLKMMVGFHVVPSALIVVTTVTF
SRELERIEPTTFCPASANAFSVFVPCGVKPRTNLRSGKSAHPGSGRHSCF
LGAVYFSYLETTAVYYSNLYSSL*
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