prot_A-nodosum_M_contig1065.29.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1065.29.1
Unique Nameprot_A-nodosum_M_contig1065.29.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length194
Homology
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BLAST of mRNA_A-nodosum_M_contig1065.29.1 vs. uniprot
Match: D8LRK7_ECTSI (YqgFc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRK7_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 2.380e-66
Identity = 121/197 (61.42%), Postives = 144/197 (73.10%), Query Frame = 0 
Query:    2 VPGITNRGNGLDLVRQVLIRARGEGIRDIVVGLPLIRNGTETEMCKVVRGFASILADAGAASRSPTSVYLWDERFSSAQAGALLDRHGGGMGSKVEIDSLAASLILEHYFSAGGRYKAEKVEPRTA--TAEIMFAAGRTGQQLAEDTDD----ESLIVEGSKRRLYKKRMESLRNTVAEEFVPMVPPRKSKRKRRKR 192
            VPG+TN G+ L++ RQVL+RARGEGIRDIVVGLPL RNGTETEMC++VRGFAS+LAD GAASR    V+LWDERFSSAQA A+LD +GGGM SKVEIDSLAASLIL+H+F  GG   AEKV+P T   TAE+  AAGR G++  ED       E    EGS+RR  + R ES R+  A E       R++ RKRR+R
Sbjct:  103 VPGVTNVGSDLEVARQVLVRARGEGIRDIVVGLPLERNGTETEMCEIVRGFASVLADVGAASRPTAGVFLWDERFSSAQAAAMLDPYGGGMSSKVEIDSLAASLILKHFFEEGGTNNAEKVKPSTGVVTAEVWRAAGRDGEEGEEDESXXXXXEDAYGEGSRRRFQEMREESARSAAAGEDSAR---RRAWRKRRRR 296
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BLAST of mRNA_A-nodosum_M_contig1065.29.1 vs. uniprot
Match: A0A7S3F3A2_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F3A2_9EUKA)

HSP 1 Score: 76.3 bits (186), Expect = 7.320e-14
Identity = 53/130 (40.77%), Postives = 70/130 (53.85%), Query Frame = 0 
Query:   17 QVLIRARGEGIRDIVVGLPLIRNGTETEMCKVVRGFASILADAGAASRSPTSVYLWDERFSSAQAGALLDRHGGGMGSKVEIDSLAASLILEHYFSAGGRYKAEKVEPRTATAEIMFAAGRTGQQLAEDT 146
            Q+   A GEG   IV+GLPL  +G E E   V R FAS LA A     S   V+LWDERFSSA+A   ++  G G  +   ID++AA++ILE +F+              ATAE + A GR  ++ A  T
Sbjct:   31 QICRIALGEGASQIVLGLPLNSSGGEGEQAVVTREFASSLACA-----SQLPVFLWDERFSSAEASMRMNS-GRGASAGQTIDAVAAAIILEEFFAG-----------EWATAESICAPGRPAEERAPTT 143
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BLAST of mRNA_A-nodosum_M_contig1065.29.1 vs. uniprot
Match: A0A7S4D691_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D691_HETAK)

HSP 1 Score: 74.3 bits (181), Expect = 1.450e-12
Identity = 49/122 (40.16%), Postives = 69/122 (56.56%), Query Frame = 0 
Query:    5 ITNRGNGLDLVRQVLIRARGEGIRDIVVGLPLIRNGTETEMCKVVRGFASILADAGAASRSPTSVYLWDERFSSAQAGALLDRHGGGMGSKVEIDSLAASLILEHYFSAGGRYKAEKVEPRT 126
            I N G+   ++R++   AR E I   VVG+PL R+G ET    + R F+  LAD   + R P  VY+W+E FSS  A +LL     G      +D++AA +ILE YFS  G + AE + PR+
Sbjct:  102 IQNSGDDSQVIREIKFMARAEQISSFVVGVPLQRDGAETNQSIINRNFSQTLADE-VSPRVP--VYVWNEAFSSVAAESLLLHKSRGEIDAC-LDAVAACMILEDYFSEDG-WGAELIPPRS 218
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BLAST of mRNA_A-nodosum_M_contig1065.29.1 vs. uniprot
Match: A0A7S3X7E5_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3X7E5_EMIHU)

HSP 1 Score: 69.7 bits (169), Expect = 3.330e-11
Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = 0 
Query:   17 QVLIRARGEGIRDIVVGLPLIRNGTETEMCKVVRGFASILADAGAASRSPTSVYLWDERFSSAQAGALLDRHGGGMGSKVEIDSLAASLILEHYFSAGGRYKAEKVEP 124
            QV+  AR EG   +V+G+P   +G E E     R F  +LA   A    P  VYLWDERFSSA+A ++    G G      ID +AA++ILE +F  G    AE + P
Sbjct:  102 QVVRAARSEGASQLVLGMPYNSSGGEGEQAVATRRFGELLAREAA----PRPVYLWDERFSSAEA-SMRANAGDGAARGQSIDDVAAAIILEEFFE-GDFASAELIAP 203
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BLAST of mRNA_A-nodosum_M_contig1065.29.1 vs. uniprot
Match: A0A7S4J4M8_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J4M8_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 7.780e-11
Identity = 49/115 (42.61%), Postives = 64/115 (55.65%), Query Frame = 0 
Query:   10 NGLDLVRQVLIRARGEGIRDIVVGLPLIRNGTETEMCKVVRGFASILADAGAASRSPT-SVYLWDERFSS----AQAGALLDRHGGGMGSKVEI----DSLAASLILEHYFSAGG 115
            N   LV +V+  A  EG    VVGLPL +NGTE+E   + R FAS LA        P   V +WDER+SS    A+A A   R GG    ++++    D+ AA LILEHY++ GG
Sbjct:  224 NETALVGEVMRLAESEGATRAVVGLPLHKNGTESERSGLTRTFASKLAAGAYGHFGPRFRVDMWDERYSSKMAAAKAVAASRRRGGEDPGRMDLYGSLDADAACLILEHYYAEGG 338
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BLAST of mRNA_A-nodosum_M_contig1065.29.1 vs. uniprot
Match: R1ED05_EMIHU (YqgFc domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ED05_EMIHU)

HSP 1 Score: 68.6 bits (166), Expect = 9.860e-11
Identity = 40/95 (42.11%), Postives = 53/95 (55.79%), Query Frame = 0 
Query:   17 QVLIRARGEGIRDIVVGLPLIRNGTETEMCKVVRGFASILADAGAASRSPTSVYLWDERFSSAQAGALLDRHGGGMGSKVEIDSLAASLILEHYF 111
            QV+  AR EG   +V+G+P   +G E E     R F  +LA   A    P  VYLWDERFSSA+A ++    G G      ID +AA++ILE +F
Sbjct:   66 QVVRAARSEGASQLVLGMPYNSSGGEGEQAVATRRFGELLAREAA----PRPVYLWDERFSSAEA-SMRANAGDGAARGQSIDDVAAAIILEEFF 155
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BLAST of mRNA_A-nodosum_M_contig1065.29.1 vs. uniprot
Match: A0A8J2T1I1_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1I1_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 2.250e-10
Identity = 43/100 (43.00%), Postives = 58/100 (58.00%), Query Frame = 0 
Query:   14 LVRQVLIRARGEGIRDIVVGLPLIRNGTETEMCKVVRGFASILADAGAASRSPTSVYLWDERFSSAQAGALLDRHGGGMGSKVEIDSLAASLILEHYFSA 113
            +V ++L  AR E I  IVVGLPL ++G E   C   R FA  LA A  A    T + LWDERFSS +A ALL    G       +D++AA +IL+ +F++
Sbjct:  113 VVARLLQIARRERIASIVVGLPLEKDGAEGLQCAATRRFADALAAAAPA----TPLVLWDERFSSREAEALLAHRPGAA-----LDAVAACVILDDFFAS 203
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BLAST of mRNA_A-nodosum_M_contig1065.29.1 vs. uniprot
Match: A0A7S0L5P9_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L5P9_9EUKA)

HSP 1 Score: 66.2 bits (160), Expect = 6.340e-10
Identity = 43/105 (40.95%), Postives = 63/105 (60.00%), Query Frame = 0 
Query:    9 GNGLDLVRQVLIRARGEGIRDIVVGLPLIRNGTETEMCKVVRGFASILADAGAASRSPTSVYLWDERFSSAQAGALLDRHGG-GMGSKVEIDSLAASLILEHYFS 112
            G+   LV+ V   A+ EG+  IVVG+P    G E +  +  R FA +LA+     R P  V+LWDERFS+A+A   +  HGG G  S   +D++AA++ILE ++S
Sbjct:   54 GDVSQLVQLVCNAAQREGVDQIVVGMPYNHTGGEGKQAQYTRQFAQMLANVA---RLP--VFLWDERFSTAEAQHRM--HGGFGAASGEAVDAVAAAVILEAFYS 151
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BLAST of mRNA_A-nodosum_M_contig1065.29.1 vs. uniprot
Match: A0A847DN65_9BACT (Putative pre-16S rRNA nuclease n=1 Tax=Candidatus Sumerlaeota bacterium TaxID=2107588 RepID=A0A847DN65_9BACT)

HSP 1 Score: 57.4 bits (137), Expect = 4.290e-7
Identity = 35/95 (36.84%), Postives = 48/95 (50.53%), Query Frame = 0 
Query:   22 ARGEGIRDIVVGLPLIRNGTETEMCKVVRGFASILADAGAASRSPTSVYLWDERFSSAQAGALLDRHGGGMGSKVEIDSLAASLILEHYFSAGGR 116
            AR EG+R IVVGLPL  +G+E       R FA  +  A         V LWDER++S  A  L ++ G    S   +D  AA+LIL+ +     +
Sbjct:   55 ARREGVRVIVVGLPLNSDGSEGPAAIKARWFADKIRQA--IGSDEIQVILWDERYTSVDAAELQEQAGAAKHSHGVVDDWAAALILQSWLDESAK 147
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BLAST of mRNA_A-nodosum_M_contig1065.29.1 vs. uniprot
Match: A0A160GGR9_9GAMM (Putative pre-16S rRNA nuclease n=5 Tax=Moraxella TaxID=475 RepID=A0A160GGR9_9GAMM)

HSP 1 Score: 57.0 bits (136), Expect = 6.850e-7
Identity = 31/87 (35.63%), Postives = 49/87 (56.32%), Query Frame = 0 
Query:   27 IRDIVVGLPLIRNGTETEMCKVVRGFASILADAGAASRSPTSVYLWDERFSSAQAGALLDRHGGGMGSKVEIDSLAASLILEHYFSA 113
            I +++VGLPL  +GT++ + K    FA  L+      + P  V+ +DER SSA+A +L    G     +  ID +AA ++L+ YF A
Sbjct:   57 IDEVLVGLPLNMDGTDSMLSKRAHKFARRLSHRLGERKHPAKVFTYDERLSSAEARSLAWERGWMQNERDPIDDIAACILLDGYFYA 143
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1065.29.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRK7_ECTSI2.380e-6661.42YqgFc domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A7S3F3A2_9EUKA7.320e-1440.77Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S4D691_HETAK1.450e-1240.16Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3X7E5_EMIHU3.330e-1140.74Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
A0A7S4J4M8_9STRA7.780e-1142.61Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
R1ED05_EMIHU9.860e-1142.11YqgFc domain-containing protein n=2 Tax=Emiliania ... [more]
A0A8J2T1I1_9STRA2.250e-1043.00Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S0L5P9_9EUKA6.340e-1040.95Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A847DN65_9BACT4.290e-736.84Putative pre-16S rRNA nuclease n=1 Tax=Candidatus ... [more]
A0A160GGR9_9GAMM6.850e-735.63Putative pre-16S rRNA nuclease n=5 Tax=Moraxella T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005227Putative pre-16S rRNA nucleasePFAMPF03652RuvXcoord: 11..112
e-value: 5.3E-17
score: 62.5
IPR005227Putative pre-16S rRNA nucleasePANTHERPTHR33317POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEINcoord: 12..130
IPR037027YqgF/RNase H-like domain superfamilyGENE3D3.30.420.140coord: 3..121
e-value: 6.7E-18
score: 66.9
NoneNo IPR availablePANTHERPTHR33317:SF4POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEINcoord: 12..130
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 11..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1065contigA-nodosum_M_contig1065:153057..161587 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1065.29.1mRNA_A-nodosum_M_contig1065.29.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1065 152706..161729 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1065.29.1 ID=prot_A-nodosum_M_contig1065.29.1|Name=mRNA_A-nodosum_M_contig1065.29.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=194bp
MVPGITNRGNGLDLVRQVLIRARGEGIRDIVVGLPLIRNGTETEMCKVVR
GFASILADAGAASRSPTSVYLWDERFSSAQAGALLDRHGGGMGSKVEIDS
LAASLILEHYFSAGGRYKAEKVEPRTATAEIMFAAGRTGQQLAEDTDDES
LIVEGSKRRLYKKRMESLRNTVAEEFVPMVPPRKSKRKRRKRE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005227YqgF
IPR037027YqgF/RNaseH-like_dom_sf
IPR012337RNaseH-like_sf