prot_A-nodosum_M_contig1065.13.3 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1065.13.3
Unique Nameprot_A-nodosum_M_contig1065.13.3
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1278
Homology
BLAST of mRNA_A-nodosum_M_contig1065.13.3 vs. uniprot
Match: D8LRM2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM2_ECTSI)

HSP 1 Score: 636 bits (1641), Expect = 2.110e-208
Identity = 420/777 (54.05%), Postives = 552/777 (71.04%), Query Frame = 0
Query:    2 HRFHERVEACAGVVKATEEARVEKEKRTLMGKACSERESALCEEVRRLKNALNTAEEIRLSIQQKAEVGSNGAQAEIARERERARAAEKDSEEWHREAEARASRLESMKTEVGALHEAMAGLHGEMGAVQRELDVAKTSQDKLTRDLAQAEGHAHKKQEALSAMLIRVKDTEKRLRKESNDKSRLSEELAKV---SRQNEKEISALTAEVDRLKKSGDVNRVSCDKLNATNRDLNALLQRLSAELEQLQEAAKADAKRVKAAEGQMHKQEERMRRLGETFTATESRLVDVGRETDLVKDALSKVTIERQNHLAEIERQRGDLELLEREKRDLVLDVQERLKALKVTSTESLRYKKLATEAERTSEKQISAKMASDDRAKKALDELNEARRATAAKDERIEALRLELSTLRRTLEQTSDTAKSRDRESAQRLVQLSQANAKLSSEGTSVRARLAEVEDSAESTIHKLEDAKKALVKSEEEVRRTSESIQRLEEELEVADARWKAAQGQLAAAERRERRITDEARQHLRDALEAKNKELDTAVREAEANNQRRSMEAEASQRAVTRDHDRTLVAVREEAKKKLAEEXXKRAHEVSEARRKTRALFGAFQAIQGELRNSEAKGISLERKMSQLSARVNRSGSSSVASSERSSRGESETRGGGIGEI--------GGRSTDVVEAEMASLRRQLNAANQAREASEKGAAEARSRAEDEAKERSALEGSLCHKEGEMLAALERLEALKQHLQETKENSRDTQEDLKSLVRQRESEMEQLTRR 767
            HRF ER EA A + + TEEAR EKE+R  + KA ++RESAL  EV RL+ A+  AE      Q++ E  +  A  EI+R RE++ +AEKD+  W + A A   RLESM  EV ALHEAMAGLHGEMGAVQRELD  KTSQDKL  DL++AEG   K QEA  + + + KD EKRLRKE+ ++ R+S EL K+   S++ E +   LTAE+ RLK+S  V+R   DKLNATNR+LNALLQ LS +LE+ + A ++  KR +A   ++  +E  ++R+ E   ATE+RL   GR+ +L+K+ALSK + E     AE +RQRG+L+LLEREK DLVLDVQER++  K  + ++ RY++   +AE   ++  SA +A++   KK LDEL EARR T  +DERIEALR EL+TLRRTLEQT++ AK+RDRESAQRLVQLSQANAKLSSE TS RAR+ + E++ E      ++A KA  K E++ RR ++S+QRLEEELE+A+ARWKAAQGQL AA RRE+   +EAR+ +R+ALE+K+KE  TA+RE E +  RR MEAEAS RAV R+HDR LVA+REEAKKKL EE  +R  EVS+AR+K++A+  A Q +QGEL  SEAKG  LER++SQLSAR++R+GSSSVA +  +    S                  G R ++V EAEM SLRRQ+ AA +A+E +++ A EAR RA++E K+RS+LE SLC KE +MLAALERL  LK   +E +E++R+ +EDL+SLVRQRESE+E LTRR
Sbjct:   65 HRFDERKEARADLWRVTEEARAEKERRDCLNKAQADRESALQNEVERLERAVKIAENSCTDTQREGERAAASADKEISRLREKSSSAEKDAATWQQRANAGELRLESMTAEVSALHEAMAGLHGEMGAVQRELDGTKTSQDKLAADLSRAEGRYRKSQEACLSTIAKAKDAEKRLRKETEERERVSAELEKLVQMSKEEETKNVTLTAEIKRLKESEGVHRSGSDKLNATNRELNALLQSLSTDLEEAKAAGESSGKRAEALAHEVGVKEGDVQRVREALAATEARLAASGRDKELLKEALSKSSAEAHAKTAEFDRQRGELDLLEREKHDLVLDVQERVRVHKEATADAERYRERLEQAENRLKEGESATLAAELSRKKTLDELGEARRGTVMQDERIEALRSELTTLRRTLEQTTEAAKARDRESAQRLVQLSQANAKLSSESTSARARVIDAEEAVEKAGQDAQEAAKAQAKLEDDGRRAADSVQRLEEELEIANARWKAAQGQLVAANRREKEFAEEARRRMREALESKDKEKVTALREMETHADRRFMEAEASHRAVERNHDRALVAIREEAKKKLLEEEARRVREVSDARKKSKAVVEALQTLQGELTQSEAKGSGLERQVSQLSARMSRAGSSSVAPAGGNGGDGSSAXXXXXXXXXXXXXXSSGARGSEVTEAEMTSLRRQMKAATEAKETAQRSALEARLRADEETKKRSSLEESLCRKESDMLAALERLNQLKIRQKEVEEHAREGEEDLRSLVRQRESEIESLTRR 841          
BLAST of mRNA_A-nodosum_M_contig1065.13.3 vs. uniprot
Match: A0A836CBP5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBP5_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.640e-14
Identity = 194/699 (27.75%), Postives = 297/699 (42.49%), Query Frame = 0
Query:  113 VGALHEAMAGLHGEMGAVQRELDVAKTSQDKLTRDLAQAEGHAHKKQEALSAMLIRVK--DTEKRLRKESNDKSRLSEELAKVSRQNEKEISALTAEVDR-----------LKKSGDVNRVSCDKLNATN------------RDLNALLQRLSAELEQLQEAAKA----DAKRVKAAEGQMH------KQEERMRRLGETFTATESRLVDVGRETDLVKDALSKVTIERQNHLAEIERQRGDLELLEREKRDLVLDVQERLKALKVTSTESLRYKKLATEAERTSEKQISAKMASDDRAKKALDELNEARRATA---AKDERIEALR----LELST---------LRRTLEQTSDTAKSRD-------------------------------RESAQRLVQLSQANAKLSSEGTSVRARLAEVEDSAESTIHKLEDAKKALVKSEEEVRRTSESIQRLEEELEVADARWKAAQGQLAAAERRERRITDEARQHLRDALEAKNKELDTAVREAEANNQRRSMEAEASQRAVTRDHDRTLVAVREEAKKKLAEEXXKRAHEVSEARRKTRALFGAFQAIQGELRNSEAKGISLERKMSQLSARVNRSGSSSVASSERSSRGESETRGGGIGEIGGRSTDVVEAEMASLRRQLNAANQAREASEKGAAEARS---RAEDEAKERSALEGSLCHKEGEMLAAL 726
            V  LH AMA LH E+G   RE   A  ++DKL RDLA+AE  A K   AL     +++  D + RL  E+   +R + E  + S++   E +A  A+ +R           L  +   NR+   K   T+            R+L AL Q+LS E        +A    DA+ + +A  Q+       K+E+ +RR  E       R          V  A        Q   +E++  R  +  LE EK D+VL+ Q +  A     + +   ++L  E+E+              RA  A +EL  AR   A   A+D  +  LR      LST         L R  ++ +   +++D                               RE+AQRLV+LSQ NAKLSSE +S+R    ++E+  E+    L+ A              ++ +Q LE++ E+A AR +A   QL AA          AR+  R ALE++++++  A RE              SQ AV R               +L  E  +R  EV EA+R+T+A+  A + +QG+L   E +  +L  ++ Q+ A     GS    +    + G S   G G            EAE ASL+R L+AA      +EK  A++R+   R++D  +E   +EG+L  KE E+  AL
Sbjct:  301 VSELHAAMAALHAELGVTSREGQAAVEARDKLKRDLARAEARADKAAGALEVAEAKLREGDHQARLAAEALTVARTAAE--EQSQRFSAERAAFLAQAERSDGQLHDFKAALSDADAANRLFLKKRFLTSTMCASCVVRGGIRELKALAQKLSQEAADAARDKEARGGEDARALASAHEQLQSIDRQLKEEQGLRRAAEA-----ERXXXXXXXXXXVSTA--------QQQRSELDGLRQAVSRLEAEKHDIVLEAQRQQAAAAAADSAACDEQRLRGESEQ--------------RAHAAAEELALAREQLAGLQARDGMLWVLRNFNYTYLSTIMIKFFMNRLPRRAQKANQGVRAKDSSTNYWAGLLSTDVLSNAALLQAXXXXXXXXREAAQRLVELSQTNAKLSSELSSLRKHADQLEEEKEAFDQTLQAA--------------AQRVQTLEDDAELAGARQQALNAQLEAAR---------ARETKRQALESRHQQVLLAARE--------------SQSAVQR---------------QLGVEVERRQREVGEAQRRTKAVGSALEVVQGQLAEEERRSSALRDELQQVKALSAAPGSLEDQAGGLFTPGGSSRHGQGSXXXX---XXAAEAERASLQRMLDAATALSADTEKALADSRAETLRSQDRLRE---VEGTLSEKERELTGAL 912          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1065.13.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRM2_ECTSI2.110e-20854.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CBP5_9STRA1.640e-1427.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 450..548
NoneNo IPR availableCOILSCoilCoilcoord: 46..66
NoneNo IPR availableCOILSCoilCoilcoord: 306..333
NoneNo IPR availableCOILSCoilCoilcoord: 383..417
NoneNo IPR availableCOILSCoilCoilcoord: 1129..1149
NoneNo IPR availableCOILSCoilCoilcoord: 71..98
NoneNo IPR availableCOILSCoilCoilcoord: 570..592
NoneNo IPR availableCOILSCoilCoilcoord: 222..277
NoneNo IPR availableCOILSCoilCoilcoord: 666..693
NoneNo IPR availableCOILSCoilCoilcoord: 722..774
NoneNo IPR availableCOILSCoilCoilcoord: 169..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 542..568
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 630..646
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1078..1097
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1158..1187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 630..713
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 886..953
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1072..1261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 901..929
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1128..1157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 691..713
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1201..1215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1113..1127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1065contigA-nodosum_M_contig1065:49720..61374 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1065.13.3mRNA_A-nodosum_M_contig1065.13.3Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1065 49597..61994 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1065.13.3 ID=prot_A-nodosum_M_contig1065.13.3|Name=mRNA_A-nodosum_M_contig1065.13.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1278bp
MHRFHERVEACAGVVKATEEARVEKEKRTLMGKACSERESALCEEVRRLK
NALNTAEEIRLSIQQKAEVGSNGAQAEIARERERARAAEKDSEEWHREAE
ARASRLESMKTEVGALHEAMAGLHGEMGAVQRELDVAKTSQDKLTRDLAQ
AEGHAHKKQEALSAMLIRVKDTEKRLRKESNDKSRLSEELAKVSRQNEKE
ISALTAEVDRLKKSGDVNRVSCDKLNATNRDLNALLQRLSAELEQLQEAA
KADAKRVKAAEGQMHKQEERMRRLGETFTATESRLVDVGRETDLVKDALS
KVTIERQNHLAEIERQRGDLELLEREKRDLVLDVQERLKALKVTSTESLR
YKKLATEAERTSEKQISAKMASDDRAKKALDELNEARRATAAKDERIEAL
RLELSTLRRTLEQTSDTAKSRDRESAQRLVQLSQANAKLSSEGTSVRARL
AEVEDSAESTIHKLEDAKKALVKSEEEVRRTSESIQRLEEELEVADARWK
AAQGQLAAAERRERRITDEARQHLRDALEAKNKELDTAVREAEANNQRRS
MEAEASQRAVTRDHDRTLVAVREEAKKKLAEEEAKRAHEVSEARRKTRAL
FGAFQAIQGELRNSEAKGISLERKMSQLSARVNRSGSSSVASSERSSRGE
SETRGGGIGEIGGRSTDVVEAEMASLRRQLNAANQAREASEKGAAEARSR
AEDEAKERSALEGSLCHKEGEMLAALERLEALKQHLQETKENSRDTQEDL
KSLVRQRESEMEQLTRRNNVLSDALSRLASSEADPDGAAYLSTEFSISEN
AAASSISDDGVEAEIEHKIPPTLALSNRCIGNGIPTGMAESGFPAILKIS
KESCQSLPASSTSQMTGEGGRATLFRPGASLSVLADSSADFTPPALPEHG
NSLPHQNSIQRQARSNQCDSGSSSGRSFGAQDDAGKLDGPALQEGRILTG
DEEERRRWKELAKNISPGNSFDVCRVDSKGNIDERVPAFADGHEEQLTGH
TTAATTGQYNGGRREETTAIDDDGVSRGLSAAGTSGALPVLGVLTSISCA
APMKREGNIGHNRERMDYLGRNARRSQGGGGIDSNRNGVAKQNSQIDNGR
DTYDEGRHSSSWAIGNDHENNSVVERLTARQADERGELARQQVDQALRER
ALRRRNSESKGATSSLRVESSLLLRPRNHNTGAKPTFQHNVHPEFAAKSD
LLDAGGEETRFMDPDPTRGGGRVALSRQNLSSKQGLPGRGGRKSRERFPA
NVVASGSTPAATKTQAARVYGMLQKSR*
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