prot_A-nodosum_M_contig1064.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1064.2.1
Unique Nameprot_A-nodosum_M_contig1064.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length231
Homology
BLAST of mRNA_A-nodosum_M_contig1064.2.1 vs. uniprot
Match: D8LNC1_ECTSI (RIBOSOMAL_L9 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNC1_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 2.620e-61
Identity = 108/189 (57.14%), Postives = 147/189 (77.78%), Query Frame = 0
Query:    1 MLPSAAMNKRRQSFGTVVKVILADDVAGTGYRGEYVEVKGGFMRNYLFPNKRAIYATEDNKLLYESQDRTAERERAAALKTIKRGRQEMASIPIILKRHLPSRAT---RLEQAVTAKHVCGYLQKNLQFKGTQEDIRMP-NGSPIMSLGEHVVSVRIPLSEAAVAILQQELGLEEFEKQAWVEMTVHVE 185
            +LP++A  +R+   GTV KVIL DDV+GTGYRGEYV+++GGFMRN+LFP+KRAIYAT+DN+L YE+ DRTAE+ERAAALK +KRGRQE++ I I+LKR++P+         QAV AK V GYL+KN  F+ T+E++R+P +G PI ++G+H V VR  LSE+  AIL  ELG +E E++AWV++ + VE
Sbjct:   23 LLPTSARGRRQ--LGTV-KVILTDDVSGTGYRGEYVDIRGGFMRNFLFPSKRAIYATDDNRLAYEAVDRTAEKERAAALKALKRGRQELSGITIVLKRNMPAGGKGGMTPGQAVRAKDVSGYLRKNSPFEVTEEEVRLPGSGKPITTVGQHTVLVRTKLSESETAILAGELGAKELEEKAWVQVELVVE 208          
BLAST of mRNA_A-nodosum_M_contig1064.2.1 vs. uniprot
Match: A0A2D4BE16_PYTIN (Ribosomal protein L9 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BE16_PYTIN)

HSP 1 Score: 92.4 bits (228), Expect = 2.220e-19
Identity = 58/155 (37.42%), Postives = 88/155 (56.77%), Query Frame = 0
Query:   12 QSFGTVVKVILADDVAGTGYRGEYVEVKGGFMRNYLFPNKRAIYATEDNKLLYESQDRTAERERAAALKTIKRGRQEMASIPIILKRHLPSRATR-LEQAVTAKHVCGYLQKNLQFKGTQEDIRMPNGSPIMSLGEHVVSVRIPLS-EAAVAILQ 164
            ++FG  V ++L +DVA  GYRG+ V VK GF RN+L+P K A+YATE N+L Y+    +A    A   +T+K+    ++++ +  KRH  ++A + L   VTA+ +   L K  Q+  T    R+    PI +LG H V +R+    E  VAI Q
Sbjct:   24 RAFGHRVSMVLKEDVASLGYRGDEVSVKAGFARNFLYPQKLAVYATEANRLKYKVDRXSANEVDAEKERTLKQIINRLSTVTVYFKRHTATKADQTLHTCVTAQEISDMLDK--QYGITVGVARVDLTHPIKTLGSHSVKIRVDEEVEKEVAIAQ 176          
BLAST of mRNA_A-nodosum_M_contig1064.2.1 vs. uniprot
Match: K3X919_GLOUD (RIBOSOMAL_L9 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X919_GLOUD)

HSP 1 Score: 88.6 bits (218), Expect = 6.620e-18
Identity = 51/143 (35.66%), Postives = 82/143 (57.34%), Query Frame = 0
Query:   12 QSFGTVVKVILADDVAGTGYRGEYVEVKGGFMRNYLFPNKRAIYATEDNKLLYESQDRTAERERAAALKTIKRGRQEMASIPIILKRHLPSRATR-LEQAVTAKHVCGYLQKNLQFKGTQEDIRMPNGSPIMSLGEHVVSVRI 153
            ++FG  V ++L  DVA  G+RGE V VK G+ RN+L+P K A+YATE N   Y+    + +   A   + +K+    ++S+ ++ KRH  S+A + L  +VTA+++   L+K          I +P  +PI +LG H V VR+
Sbjct:   24 RAFGHRVSMVLKQDVANLGFRGEEVSVKAGYARNFLYPEKLAVYATEANLEKYKVNKESVDEADAEKERALKQIISRLSSVEVVFKRHTASKAEQTLHSSVTAQNISDMLEKQHGIIVGVARINLP--TPIKTLGSHSVKVRV 164          
BLAST of mRNA_A-nodosum_M_contig1064.2.1 vs. uniprot
Match: A0A8K1CGK3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGK3_PYTOL)

HSP 1 Score: 87.0 bits (214), Expect = 1.650e-16
Identity = 63/185 (34.05%), Postives = 102/185 (55.14%), Query Frame = 0
Query:   12 QSFGTVVKVILADDVAGTGYRGEYVEVKGGFMRNYLFPNKRAIYATEDNKLLY----ESQDRT-AERERAAALKTIKRGRQEMASIPIILKRHLPSRATR-LEQAVTAKHVCGYLQKNLQFKGTQEDIRMPNGSPIMSLGEHVVSVRIP------LSEAAVAILQQELGLEEFEKQAWVEMTVHV 184
            ++FG  V ++L +DVA  GYRG+ V VK GF RN+L+P K A+YATE N++ Y    ES D   AE+ERA     +K+    +++  +  KR+  S+  + L   VTA+ +   L+K L        I +P  +PI +LG H++ +R+       ++ A  A   +EL + +  K+  V++ V V
Sbjct:  159 RAFGHRVSMVLKEDVANLGYRGDEVSVKAGFARNFLYPQKLAVYATEANRVKYKVDRESLDEVDAEKERA-----VKQVVDRLSASTVYFKRYTASKTEQTLHTCVTAQEISDALEKQLGIIVGVARIDLP--TPIKTLGAHLIKIRVDDEVTTEVANAEKAANGEELEMVDTSKKQIVQLDVQV 336          
BLAST of mRNA_A-nodosum_M_contig1064.2.1 vs. uniprot
Match: A0A3M6VRU6_9STRA (RIBOSOMAL_L9 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VRU6_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 2.490e-16
Identity = 56/147 (38.10%), Postives = 84/147 (57.14%), Query Frame = 0
Query:   12 QSFGTVVKVILADDVAGTGYRGEYVEVKGGFMRNYLFPNKRAIYATEDNKLLY----ESQDRTAERERAAALKTIKRGRQEMASIPIILKRHLPSRA-TRLEQAVTAKHVCGYLQKNLQFKGTQEDIRMPNGSPIMSLGEHVVSVRI 153
            +SF   V ++L +DV   GYRG+ V VK G+ RNYL+P K A+YATE N   Y    ES D T + E+   L+ I     ++++I ++ KRH  S+A  +L   V A+++   L+K          I +P  +PI +LGEH+V VR+
Sbjct:   22 RSFAHRVSMVLKEDVGNLGYRGDEVFVKAGYARNYLYPEKLAVYATEANLQKYKVDKESVDET-QLEKEHELEAII---HQLSNIEVVFKRHTASKADVKLHSEVNAQNISDMLEKQHDLIVGVARIDLP--APIKTLGEHMVKVRV 162          
BLAST of mRNA_A-nodosum_M_contig1064.2.1 vs. uniprot
Match: F0WA30_9STRA (Transmembrane protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WA30_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 7.900e-15
Identity = 49/141 (34.75%), Postives = 81/141 (57.45%), Query Frame = 0
Query:   14 FGTVVKVILADDVAGTGYRGEYVEVKGGFMRNYLFPNKRAIYATEDNKLLYESQDRTAERERAAALKTIKRGRQEMASIPIILKRHLPSRATR-LEQAVTAKHVCGYLQKNLQFKGTQEDIRMPNGSPIMSLGEHVVSVRI 153
            FG  V +IL  D+   G RG+ V VK G+ RNYL+P K A+YAT +N+  ++    +++  +    + ++R  +++ SI ++LKRH PS+  +    A+TA  V   L K       +  I++P   PI +LG+HV+ VR+
Sbjct:   26 FGHYVNLILKQDIKKLGNRGDEVRVKAGYARNYLYPEKLAVYATPENQKTHKINKESSDELKLDKERDLQRVIKKITSIELLLKRHTPSKREKTFSGAITAPIVSDMLLKQHGLLVGRARIQLP--VPITNLGDHVIKVRV 164          
BLAST of mRNA_A-nodosum_M_contig1064.2.1 vs. uniprot
Match: G4ZII5_PHYSP (RIBOSOMAL_L9 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZII5_PHYSP)

HSP 1 Score: 79.3 bits (194), Expect = 2.070e-14
Identity = 45/143 (31.47%), Postives = 78/143 (54.55%), Query Frame = 0
Query:   12 QSFGTVVKVILADDVAGTGYRGEYVEVKGGFMRNYLFPNKRAIYATEDNKLLYESQDRTAERERAAALKTIKRGRQEMASIPIILKRHLPSRA-TRLEQAVTAKHVCGYLQKNLQFKGTQEDIRMPNGSPIMSLGEHVVSVRI 153
            +SF   V ++L +DV   G+RG+ V VK G+ RN+L+P K A+YAT+ N+  Y+    + +         ++     ++++ ++ KRH  S+A  +L   V A+++   L+K          I +P  +PI +LGEH V VR+
Sbjct:   25 RSFAHRVNMVLKEDVPKLGFRGDEVSVKAGYARNFLYPEKLAVYATDANREKYKGDKESVDESELEKEHELEAIIYRLSNVEVVFKRHTASKADVKLHSEVNAQNISDMLEKQHGLIVGVARIDLP--TPIKTLGEHTVKVRV 165          
BLAST of mRNA_A-nodosum_M_contig1064.2.1 vs. uniprot
Match: A0A6G0NA99_9STRA (RIBOSOMAL_L9 domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0NA99_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 4.320e-14
Identity = 53/192 (27.60%), Postives = 96/192 (50.00%), Query Frame = 0
Query:   12 QSFGTVVKVILADDVAGTGYRGEYVEVKGGFMRNYLFPNKRAIYATEDNKLLYESQDRTAERERAAALKTIKRGRQEMASIPIILKRHLPSRA-TRLEQAVTAKHVCGYLQKNLQFKGTQEDIRMPNGSPIMSLGEHVVSVRIPLS----------------EAAVAILQQELGLEEFEKQAWVEMTVHVEK 186
            +SF   V ++L +DV   G+RG+ V VK G+ RN+L+P K A+YAT+ N+  Y+   ++ +  +      ++     ++++ +  KRH  S+A  +L   V A+++   L+K          I +P  +PI +LGEH V VR+  +                E A A + +E   +   K+ WV + + +E+
Sbjct:   53 RSFAHRVNMVLKEDVPKLGFRGDEVSVKAGYARNFLYPEKLAVYATDANRHKYKVYQQSVDETQLEKEHELEAIIHHLSNVEVTFKRHTASKADVKLHSEVNAQNISDMLEKQHGLIVGVARIDLP--TPIKTLGEHTVKVRVDDAIVEEYASGAVVSAADDETAAADVDEEKEKKGPSKKKWVSLAIEIER 242          
BLAST of mRNA_A-nodosum_M_contig1064.2.1 vs. uniprot
Match: A0A024GIB8_9STRA (RIBOSOMAL_L9 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GIB8_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 4.860e-14
Identity = 54/147 (36.73%), Postives = 81/147 (55.10%), Query Frame = 0
Query:   12 QSFGTVVKVILADDVAGTGYRGEYVEVKGGFMRNYLFPNKRAIYATEDNKLLY----ESQDRTAERERAAALKTIKRGRQEMASIPIILKRHLPSRATR-LEQAVTAKHVCGYLQKNLQFKGTQEDIRMPNGSPIMSLGEHVVSVRI 153
            +SFG  V +IL  DV   G RG+ V VK G+ RNYL+P K A+YAT +N+ ++    ES+D     +     K IK+    + SI ++ KRH PS+  +    A+TA  V   L +       +  I++P   PI +LG+HV+ VR+
Sbjct:   24 RSFGHYVNLILKQDVEKLGNRGDEVRVKAGYARNYLYPEKLAVYATPENQNIHKINKESRDELGLDKERELQKVIKK----IMSIELLFKRHTPSKREKTFSGAITAPIVSDMLLRQHGLLVGRARIQLP--IPITNLGDHVIKVRV 164          
BLAST of mRNA_A-nodosum_M_contig1064.2.1 vs. uniprot
Match: L8GSW4_ACACA (Ribosomal protein L9, Nterminal domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GSW4_ACACA)

HSP 1 Score: 77.0 bits (188), Expect = 7.830e-14
Identity = 47/142 (33.10%), Postives = 77/142 (54.23%), Query Frame = 0
Query:   18 VKVILADDVAGTGYRGEYVEVKGGFMRNYLFPNKRAIYATEDNKLLYESQDRTAERERAAALKTIKRGRQEMASIPIILKRHL----PSRATRLEQAVTAKHVCG--YLQKNLQFKGTQEDIRMPNGSPIMSLGEHVVSVRI 153
            +K++L  DV   G +GE VEV  GF RNYLFP K A+Y TE+N  LYE+     + E+   L+ + + ++ ++ + +++KR +    P +   L   VTA ++    +LQ  +Q    Q D+     +PI  LG   V V++
Sbjct:   36 IKIVLTSDVPSVGVKGEDVEVAKGFARNYLFPQKLAVYCTEENLKLYEADRANIDYEKRQKLQELAKAKKRLSKVEVLMKRQIIQVQPEQI--LHAPVTADNIVEKLWLQHKIQLAKDQLDLE----APISQLGTFSVPVKL 171          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1064.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNC1_ECTSI2.620e-6157.14RIBOSOMAL_L9 domain-containing protein n=2 Tax=Ect... [more]
A0A2D4BE16_PYTIN2.220e-1937.42Ribosomal protein L9 n=1 Tax=Pythium insidiosum Ta... [more]
K3X919_GLOUD6.620e-1835.66RIBOSOMAL_L9 domain-containing protein n=1 Tax=Glo... [more]
A0A8K1CGK3_PYTOL1.650e-1634.05Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3M6VRU6_9STRA2.490e-1638.10RIBOSOMAL_L9 domain-containing protein n=1 Tax=Per... [more]
F0WA30_9STRA7.900e-1534.75Transmembrane protein putative n=1 Tax=Albugo laib... [more]
G4ZII5_PHYSP2.070e-1431.47RIBOSOMAL_L9 domain-containing protein n=4 Tax=Phy... [more]
A0A6G0NA99_9STRA4.320e-1427.60RIBOSOMAL_L9 domain-containing protein n=1 Tax=Phy... [more]
A0A024GIB8_9STRA4.860e-1436.73RIBOSOMAL_L9 domain-containing protein n=1 Tax=Alb... [more]
L8GSW4_ACACA7.830e-1433.10Ribosomal protein L9, Nterminal domain containing ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036935Ribosomal protein L9, N-terminal domain superfamilyGENE3D3.40.5.10coord: 19..77
e-value: 2.4E-15
score: 57.8
IPR020594Ribosomal protein L9, bacteria/chloroplastTIGRFAMTIGR00158TIGR00158coord: 18..153
e-value: 3.8E-18
score: 64.4
IPR020070Ribosomal protein L9, N-terminalPFAMPF01281Ribosomal_L9_Ncoord: 18..61
e-value: 6.7E-18
score: 64.0
IPR020070Ribosomal protein L9, N-terminalPROSITEPS00651RIBOSOMAL_L9coord: 30..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 210..230
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..230
IPR000244Ribosomal protein L9PANTHERPTHR2136850S RIBOSOMAL PROTEIN L9coord: 13..156
IPR009027Ribosomal protein L9/RNase H1, N-terminalSUPERFAMILY55658L9 N-domain-likecoord: 18..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1064contigA-nodosum_M_contig1064:10853..24958 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1064.2.1mRNA_A-nodosum_M_contig1064.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1064 10434..24984 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1064.2.1 ID=prot_A-nodosum_M_contig1064.2.1|Name=mRNA_A-nodosum_M_contig1064.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=231bp
MLPSAAMNKRRQSFGTVVKVILADDVAGTGYRGEYVEVKGGFMRNYLFPN
KRAIYATEDNKLLYESQDRTAERERAAALKTIKRGRQEMASIPIILKRHL
PSRATRLEQAVTAKHVCGYLQKNLQFKGTQEDIRMPNGSPIMSLGEHVVS
VRIPLSEAAVAILQQELGLEEFEKQAWVEMTVHVEKTKAKDERRLEEVDM
EEEARVEEGREDEVDSQAREKNDASVSMRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036935Ribosomal_L9_N_sf
IPR020594Ribosomal_L9_bac/chp
IPR020070Ribosomal_L9_N
IPR000244Ribosomal_L9
IPR009027Ribosomal_L9/RNase_H1_N