prot_A-nodosum_M_contig1064.19.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1064.19.1
Unique Nameprot_A-nodosum_M_contig1064.19.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length576
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig1064.19.1 vs. uniprot
Match: A0A6H5KEV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEV5_9PHAE)

HSP 1 Score: 313 bits (803), Expect = 1.580e-97
Identity = 219/458 (47.82%), Postives = 266/458 (58.08%), Query Frame = 0 
Query:  121 MAVGSEVHVVARTEPGVTEEGVAAEEECKQDKG--QASARRSTQNQKIPPTPSLSIFASLHRKLIVQQVLTATKRAEIRARKHEIDLQEKQAKNKLKRMDDHDEKLRAVVSMP-----AVPSKHSAAAGVGGDGAVGGSHPKKDRKRGRSLSEAGKGGGEDGGSRERERDPLTAWVYDCYHNDGYAGHVSDLRQFLKGIEFRHVMFRYHVLPDGTLEPDRRRFCVRFKTKAGRDLAVGRSGEAFGAAGSW--SPDSVAVVRGRNEYASSSSEDSDEGRVSEFLLVLPPGRSVAEVLKKVRARLPGDLTPALETPDPAAATLGERAGENSKGDPRSYQ-HDRATSSLSDPRERHRLQNHRKRLEAYRRDMLRAALGAAVVEAGVLGSQRGAPTA--RIVGTDEDNARRVATLGANEAGRRLSFDWKGAGAKTGLLRQSAGGGTRRTRLPAGPPGGARAQ 566
            MA+GSEVHV+ART+    + G A+    ++ +G  QA A  + +       P +++FASLHRKLIVQQVLT  KRAEI+AR  EID +EKQAK K+ RM+D +E L A  ++P     A                                               R RDPLTAWV  CY++DGYAGHVSDLRQF +GI+F H+M RYHVLPDGTL+PDRRRFCVRFKTKAGRDLA+ RSGEA G+  SW    D V V+RGR+      + DSD G + + L+VLP GRSVA+VL KV ARLP DLTPAL     AA    + A  NSK  PR ++ HD        P  +         LEAYRRDMLRAALG  + EA  LG +RGAP A  R+ GTDEDNARRVA L + EA   L    +G  A     R+S         +P+GP GGARAQ
Sbjct:    1 MAIGSEVHVLARTQQQQQQPGNASRHCGRRGEGGRQAGAGETVEAGDKSGNPGMTVFASLHRKLIVQQVLTEAKRAEIKARNDEIDRREKQAKKKMARMEDQEEMLAAAEAIPVPVGQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRRDPLTAWVCGCYNDDGYAGHVSDLRQFFRGIDFHHLMLRYHVLPDGTLDPDRRRFCVRFKTKAGRDLAIKRSGEALGSYCSWWDPGDVVTVIRGRDV-----ASDSDGGGIDDMLVVLPQGRSVADVLDKVEARLPKDLTPAL-----AAQRTDDDATNNSKKRPRRHRKHDDGERPQQLPESQ---------LEAYRRDMLRAALGCGLAEALALGPKRGAPAAAARVAGTDEDNARRVAILASGEAATALD---RGTAAAAREGRRSXXXXXXVQVVPSGPVGGARAQ 436
[Close]
BLAST of mRNA_A-nodosum_M_contig1064.19.1 vs. uniprot
Match: D8LND1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LND1_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 5.410e-35
Identity = 88/164 (53.66%), Postives = 110/164 (67.07%), Query Frame = 0 
Query:   72 MTIRLTPELLATLQT--PGPKPIVELMLKSVAEGGPVLVVGGVHYKTHSHKMAVGSEVHVVARTE--PGVTEEGVAAEEECKQDKGQASARRSTQNQKIPPTPSLSIFASLHRKLIVQQVLTATKRAEIRARKHEIDLQEKQAKNKLKRMDDHDEKLRAVVSMP 231
            MTIRLTPE+L  L    PGPKP +EL+LKS  EGGPVL+VGGV +K  +H+MA+GSEVHV+ART+  PG          E  +   QA A    +       P +++FASLHRKLIVQQVLT  KRAEI+AR  EID +EKQAK K+ RM+D +E L A  ++P
Sbjct:    1 MTIRLTPEVLGRLMMNGPGPKPEIELVLKSAGEGGPVLLVGGVSHKLDAHQMAIGSEVHVLARTQQQPGNGSRHCGHRGEGGR---QAGAGEMVEAGGKSGNPGMTVFASLHRKLIVQQVLTEAKRAEIKARNDEIDRREKQAKKKMVRMEDQEEMLAAAEAIP 161
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1064.19.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KEV5_9PHAE1.580e-9747.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LND1_ECTSI5.410e-3553.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 191..223
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 418..469
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 541..575
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 438..463
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..168
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..280
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1064contigA-nodosum_M_contig1064:221812..226332 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1064.19.1mRNA_A-nodosum_M_contig1064.19.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1064 221566..227129 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1064.19.1 ID=prot_A-nodosum_M_contig1064.19.1|Name=mRNA_A-nodosum_M_contig1064.19.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=576bp
MMLTTSRASGSSITRNDAAVAIIPRPIDHAASRSVTGAVCFGPGVAEVRV
HPRRGGPGSEGERTILKPHAGMTIRLTPELLATLQTPGPKPIVELMLKSV
AEGGPVLVVGGVHYKTHSHKMAVGSEVHVVARTEPGVTEEGVAAEEECKQ
DKGQASARRSTQNQKIPPTPSLSIFASLHRKLIVQQVLTATKRAEIRARK
HEIDLQEKQAKNKLKRMDDHDEKLRAVVSMPAVPSKHSAAAGVGGDGAVG
GSHPKKDRKRGRSLSEAGKGGGEDGGSRERERDPLTAWVYDCYHNDGYAG
HVSDLRQFLKGIEFRHVMFRYHVLPDGTLEPDRRRFCVRFKTKAGRDLAV
GRSGEAFGAAGSWSPDSVAVVRGRNEYASSSSEDSDEGRVSEFLLVLPPG
RSVAEVLKKVRARLPGDLTPALETPDPAAATLGERAGENSKGDPRSYQHD
RATSSLSDPRERHRLQNHRKRLEAYRRDMLRAALGAAVVEAGVLGSQRGA
PTARIVGTDEDNARRVATLGANEAGRRLSFDWKGAGAKTGLLRQSAGGGT
RRTRLPAGPPGGARAQRREAAERTR*
back to top