prot_A-nodosum_M_contig1062.16.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1062.16.1
Unique Nameprot_A-nodosum_M_contig1062.16.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length228
Homology
BLAST of mRNA_A-nodosum_M_contig1062.16.1 vs. uniprot
Match: D7FZY6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZY6_ECTSI)

HSP 1 Score: 287 bits (734), Expect = 2.650e-95
Identity = 130/206 (63.11%), Postives = 160/206 (77.67%), Query Frame = 0
Query:   22 RPGDTSLWHRHSQDTFYVCIEHAVSALNRPSDKAPYVHHASPGDLWWSMSKNAPFVHQVCLLPENTNSSQFFAMEILKPPPVVSNSPLMHRSYKLRKDFSRAGLARVYEFKVEPGESTGPHSWDFYGVVVCLSDGGGKIDAVGDSDSDVQGRRGPFEDGVLSRVGGWKWVEGPVDVDVRNAGERPYEAIVVEWLGESGEVDGVARL 227
            RPG+TSLWHRHS++T YVC+ H  +ALNRP+DK P+VHHASPGDLWW+MSK+AP+VHQVCLLPENT++S FFAMEIL+PPP  S+  L HR Y LR + SR GLARVY+F+++PGESTGPH+  F GVV+CLSDGGG ++A G          G F  G LS+VGGWKW++GPV  + RNAG   Y+A VVEWLG    V+GV+RL
Sbjct:   40 RPGETSLWHRHSENTLYVCVGHGAAALNRPTDKEPFVHHASPGDLWWAMSKSAPYVHQVCLLPENTHNSHFFAMEILRPPPTCSSRALDHRCYSLRGEDSRPGLARVYDFRLKPGESTGPHTLGFSGVVLCLSDGGGSLEADG----------GVFAGGELSKVGGWKWIDGPVSANARNAGGSVYQAFVVEWLGGGHSVEGVSRL 235          
BLAST of mRNA_A-nodosum_M_contig1062.16.1 vs. uniprot
Match: A0A836CD60_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD60_9STRA)

HSP 1 Score: 190 bits (483), Expect = 2.610e-57
Identity = 96/199 (48.24%), Postives = 127/199 (63.82%), Query Frame = 0
Query:   23 PGDTSLWHRHSQDTFYVCIEHAVSALNRPSDKAPYVHHASPGDLWWSMSKNAPFVHQ------VCLLPENTNSSQFFAMEILKPPPVVSNSPLMHRSYKLRKDFSRAGLARVYEFKVEPGESTGPHSWDFYGVVVCLSDGGGKIDAVGDSDSDVQGRRGPFEDGVLSRVGGWKWVEGPVDVDVRNAGERPYEAIVVEWL 215
            PG    WHRHS+D+FYV +     ALNRP D+  YVH     D WWSM+K +P +HQ      VCLL E   ++ FFA+EILK PPV S++PL    Y +  ++S+   ARVY+  +EPG+STG H W+FYGVV+ LSDG  ++ + GD          PF DG LS+ G +KWVEGP++  V+N GE  Y+A+VVEWL
Sbjct:   41 PGKMCKWHRHSEDSFYVALTDG-KALNRPCDRPEYVHPIKQFDQWWSMAKTSPIIHQARYLPQVCLLAECPIAADFFALEILKSPPVTSDAPLNCPGYTVESEYSK-DKARVYQLSLEPGQSTGMHKWNFYGVVLSLSDG--ELSSEGDGS--------PFADGKLSKYGRFKWVEGPIEFSVKNEGEAVYKALVVEWL 227          
BLAST of mRNA_A-nodosum_M_contig1062.16.1 vs. uniprot
Match: A0A836C8W9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8W9_9STRA)

HSP 1 Score: 167 bits (422), Expect = 3.370e-48
Identity = 83/193 (43.01%), Postives = 114/193 (59.07%), Query Frame = 0
Query:   23 PGDTSLWHRHSQDTFYVCIEHAVSALNRPSDKAPYVHHASPGDLWWSMSKNAPFVHQVCLLPENTNSSQFFAMEILKPPPVVSNSPLMHRSYKLRKDFSRAGLARVYEFKVEPGESTGPHSWDFYGVVVCLSDGGGKIDAVGDSDSDVQGRRGPFEDGVLSRVGGWKWVEGPVDVDVRNAGERPYEAIVVEWL 215
            PG++ +WHRHSQD+FYV +  +  A+NRP+DK     +   GD WWS+ K    VHQVCL       ++FF +E+LK PPV S SPL   +Y L   F+    AR+Y+  ++PG+STG H+W+F+  V+CLSDG          +   +G   PF    L   G +KWVEGPV   V+N G   Y A+VVEW+
Sbjct:   41 PGESCMWHRHSQDSFYVALA-SCEAINRPTDKPEGELNLKAGDKWWSLYKAKDMVHQVCLPGTCAAPAKFFGVEVLKSPPVYSESPLGGNAYTLLDQFT-IDRARIYDMTLQPGQSTGMHTWNFFATVLCLSDG----------ELSTEGADSPFAFLGLRTYGQYKWVEGPVTFSVKNEGSAAYTAVVVEWV 221          
BLAST of mRNA_A-nodosum_M_contig1062.16.1 vs. uniprot
Match: A0A835ZHZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHZ6_9STRA)

HSP 1 Score: 149 bits (376), Expect = 3.690e-41
Identity = 78/194 (40.21%), Postives = 104/194 (53.61%), Query Frame = 0
Query:   23 PGDTSLWHRHSQDTFYVCIEHAVSALNRPSDKAPYVHHASPGDLWWSMSKN-APFVHQVCLLPENTNSSQFFAMEILKPPPVVSNSPLMHRSYKLRKDFSRAGLARVYEFKVEPGESTGPHSWDFYGVVVCLSDGGGKIDAVGDSDSDVQGRRGPFEDGVLSRVGGWKWVEGPVDVDVRNAGERPYEAIVVEWL 215
            PG     H+H++DTFY  +            K  +      G  WW+++K   P VHQV L     + S FFA+E LK PP+    PL H +Y L   +SR G ARVY  ++ PGESTG H W F+ VV+ +SDG  K+          +G   PF D  L R GG  WVEGPV+  V N G++PY+A+V+E L
Sbjct:   48 PGRPCEMHKHTEDTFYRALTDGPCKAKTAEGKE-FDQDIKKGSQWWNLNKTEGPMVHQVTLAESFPHRSDFFALEFLKSPPIDGGEPLKHPAYTLDTKYSREGTARVYHLEIGPGESTGIHRWQFFAVVLSVSDG--KLT--------TEGENSPFLDKALQRYGGDMWVEGPVEFSVTNIGDQPYQALVIELL 230          
BLAST of mRNA_A-nodosum_M_contig1062.16.1 vs. uniprot
Match: UPI00166F5ED3 (hypothetical protein n=1 Tax=Marinobacterium nitratireducens TaxID=518897 RepID=UPI00166F5ED3)

HSP 1 Score: 91.3 bits (225), Expect = 8.040e-19
Identity = 60/193 (31.09%), Postives = 90/193 (46.63%), Query Frame = 0
Query:   23 PGDTSLWHRHSQDTFYVCIEHAVSALNRPSDKAPYVHHASPGDLWWSMSKNAPFVHQVCLLPENTNSSQFFAMEILKPPPVVSNSPLMHRSYKLRKDFSRAGLARVYEFKVEPGESTGPHSWDFYGVVVCLSDGGGKIDAVGDSDSDVQGRRGPFEDGVLSRV-GGWKWVEGPVDVDVRNAGERPYEAIVVEW 214
            PG++SL+HRH +DT YV +  A             VH    G       K  P +H+V    + T   Q    E+ K P +V+  PL    + L ++ S A   R+Y  K+EPGE+TGP ++ F G+ V +SD   +        +D  G R      V+S   G   W +GP+   + N GE  + A++ EW
Sbjct:   51 PGESSLYHRHDEDTLYVTVRDATIHDQTYQSDECQVHRIPAGLSLCRPHKGEPLIHRV--RNDGTGPMQMIGAEVKKLPEIVAAEPLQAPFHTLLENLSGARRLRLYMIKLEPGETTGPVTYGFSGLTVSISDANVEF-------ADATGVRR-----VISFAPGAHIWHDGPLTQTLTNRGETAFVAVLGEW 229          
BLAST of mRNA_A-nodosum_M_contig1062.16.1 vs. uniprot
Match: UPI001EDF32C1 (hypothetical protein n=1 Tax=Pseudomonas sp. MMS21 TM103 TaxID=2886506 RepID=UPI001EDF32C1)

HSP 1 Score: 89.0 bits (219), Expect = 7.630e-18
Identity = 63/197 (31.98%), Postives = 88/197 (44.67%), Query Frame = 0
Query:   24 GDTSLWHRHSQDTFYVCIEHAVSALNRPSDKAPYVHHASPGDLWWSMSKN---APFVHQVCLLPENTNSS--QFFAMEILKPPPVVSNSPLMHRSYKLRKDFSRAGLARVYEFKVEPGESTGPHSWDFYGVVVCLSDGGGKID-AVGDSDSDVQGRRGPFEDGVLSRVGGWKWVEGPVDVDVRNAGERPYEAIVVEW 214
            G+ SL+HRHSQDTFYV + HA    ++  D      H  P     SM +     P +HQV     NT     +    E+ K P V + +PL    ++L  +       R+Y  K+ PG STG   + F  + V LS    KID A G S              V    G   W +GP  + + N G+ P+EA++ EW
Sbjct:   65 GEKSLYHRHSQDTFYVAV-HATKVYDQTLDAEQGAEHDLPAGF--SMCRGHLGEPLIHQV----SNTGEGPMRMIGAEVRKRPAVTTEAPLQALHHELAPNMFDVDRVRMYRIKLVPGMSTGEIRYGFSALTVVLSQSSLKIDEATGGSQV------------VSYEPGDHVWRDGPTTLTLTNVGDTPFEAVMGEW 242          
BLAST of mRNA_A-nodosum_M_contig1062.16.1 vs. uniprot
Match: A0A7C7TBA7_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiia TaxID=84992 RepID=A0A7C7TBA7_9ACTN)

HSP 1 Score: 79.0 bits (193), Expect = 2.380e-14
Identity = 56/206 (27.18%), Postives = 91/206 (44.17%), Query Frame = 0
Query:   10 YTRLYKALQTSARPGDTSLWHRHSQDTFYVCIEHAVSALNRPSDKAPYVHHASPGDLWWSMSKNAPFVHQVCLLPENTNSSQFFAMEILKPPPVVSNSPLMHRSYKLRKDFSRAGLARVYEFKVEPGESTGPHSWDFYGVVVCLSDGGGKIDAVGDSDSDVQGRRGPFEDGVLS-RVGGWKWVEGPVDVDVRNAGERPYEAIVVEW 214
            Y RLY  L      GD +L+HRH  DTFYV I  +        +        + G  +     + P +H+VC +   + +++    E+   PP+ ++ PL    + ++K+  R    RVY  +++P E+TGP S+DFY + V L    G +  + D               ++S   G   W     +  + N G   Y+AIV EW
Sbjct:   23 YIRLYDVLIPE---GDQTLYHRHDVDTFYVMIADSSVEDRTFGESTSSTAQITAGGAFLRAHLSEPLIHRVCNI--GSGAARMIGAELKAAPPMSASFPLNVPCHSVQKEHDRL---RVYRLRIQPEETTGPISYDFYSLTVVLE---GAVVLIEDE---------LHNQTLMSCSAGDAIWQSPRSNFTISNPGRGEYQAIVAEW 208          
BLAST of mRNA_A-nodosum_M_contig1062.16.1 vs. uniprot
Match: A0A2E8GIA0_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8GIA0_9ACTN)

HSP 1 Score: 78.6 bits (192), Expect = 3.130e-14
Identity = 58/205 (28.29%), Postives = 89/205 (43.41%), Query Frame = 0
Query:   10 YTRLYKALQTSARPGDTSLWHRHSQDTFYVCIEHAVSALNRPSDKAPYVHHASPGDLWWSMSKNAPFVHQVCLLPENTNSSQFFAMEILKPPPVVSNSPLMHRSYKLRKDFSRAGLARVYEFKVEPGESTGPHSWDFYGVVVCLSDGGGKIDAVGDSDSDVQGRRGPFEDGVLSRVGGWKWVEGPVDVDVRNAGERPYEAIVVEW 214
            Y RLY  L      GD +L+HRH  DTFYV I ++                   G  +     + P +H+VC +      ++    E+   PP+ S+SPL    + ++K+  R    RVY   ++P ++TG  S+DFYG+ V L   G  + +V D   +        E  +    G   W     +  + N G+  Y AIV EW
Sbjct:   23 YIRLYDVLIPK---GDETLYHRHGVDTFYVMIVNSSVQDRTYGAATSSTAEIRAGGAFLRGHLSEPLIHRVCNV--GLGDARMIGAELKAAPPLSSSSPLRDPCHSIQKEHDRL---RVYRLGIQPDQTTGRISYDFYGLTVVL---GAAVISVEDELHN--------ETLISCSAGDAIWQSPRSNFTISNPGQVEYRAIVAEW 208          
BLAST of mRNA_A-nodosum_M_contig1062.16.1 vs. uniprot
Match: UPI00037123EA (hypothetical protein n=1 Tax=Marinobacterium rhizophilum TaxID=420402 RepID=UPI00037123EA)

HSP 1 Score: 79.0 bits (193), Expect = 3.170e-14
Identity = 61/206 (29.61%), Postives = 90/206 (43.69%), Query Frame = 0
Query:   10 YTRLYKALQTSARPGDTSLWHRHSQDTFYVCIEHAVSALNRPSDKAPYVHHASPGDLWWSMSKNA-PFVHQVCLLPENTNSSQFFAMEILKPPPVVSNSPLMHRSYKLRKDFSRAGLARVYEFKVEPGESTGPHSWDFYGVVVCLSDGGGKIDAVGDSDSDVQGRRGPFEDGVLSRVGGWKWVEGPVDVDVRNAGERPYEAIVVEW 214
            Y R+Y       +PG+ SL+HRHS DT YV + +     ++       V H  P  L         P +H+V    E     Q    E  + PPVV+  PL    +    D  +    R Y+  ++PGESTG   + F G++V  SD      AVGD  +      GP         G + W +GP+   + N G+ P+ A++ EW
Sbjct:   40 YARVY---DVRFKPGEHSLYHRHSVDTLYVAV-YDTRVFDQTYGADHGVTHELPAGLCGCRPHGREPLIHRV--RNEGAGLMQMIGAEHKRSPPVVAERPLEAPLHTPVADPFKGESIRCYQIDLQPGESTGLVEYPFSGLLVSFSDA---TLAVGDGRATQVVAFGP---------GTFIWHDGPIARQLHNVGKTPFRAVLGEW 227          
BLAST of mRNA_A-nodosum_M_contig1062.16.1 vs. uniprot
Match: A0A381REV2_9ZZZZ (Uncharacterized protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381REV2_9ZZZZ)

HSP 1 Score: 74.7 bits (182), Expect = 8.460e-13
Identity = 57/205 (27.80%), Postives = 87/205 (42.44%), Query Frame = 0
Query:   10 YTRLYKALQTSARPGDTSLWHRHSQDTFYVCIEHAVSALNRPSDKAPYVHHASPGDLWWSMSKNAPFVHQVCLLPENTNSSQFFAMEILKPPPVVSNSPLMHRSYKLRKDFSRAGLARVYEFKVEPGESTGPHSWDFYGVVVCLSDGGGKIDAVGDSDSDVQGRRGPFEDGVLSRVGGWKWVEGPVDVDVRNAGERPYEAIVVEW 214
            Y RLY  L      GD +L+HRH+ DTFYV I ++        +        + G  +     +AP +H+VC +      ++    E+   PP  S  PL    + LRK+  R  L R+    ++P ++TGP S+DFY + V L      I  + +  ++           V    G   W     +  + N G   Y AIV EW
Sbjct:   23 YIRLYDVLIPE---GDQTLYHRHNVDTFYVMIANSSVQDQTFGEATCSAAEITAGGAFLRAHLSAPLIHRVCNV--GFGDARMIGAELKAAPPTASPVPLNAPCHSLRKEHERLRLHRLV---IQPDQTTGPISYDFYSLTVVLE--AAVISLMDEFHNETV---------VSCSAGDAIWQAPRSNFAISNPGGSEYRAIVGEW 208          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1062.16.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7FZY6_ECTSI2.650e-9563.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CD60_9STRA2.610e-5748.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C8W9_9STRA3.370e-4843.01Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZHZ6_9STRA3.690e-4140.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI00166F5ED38.040e-1931.09hypothetical protein n=1 Tax=Marinobacterium nitra... [more]
UPI001EDF32C17.630e-1831.98hypothetical protein n=1 Tax=Pseudomonas sp. MMS21... [more]
A0A7C7TBA7_9ACTN2.380e-1427.18Uncharacterized protein n=2 Tax=Acidimicrobiia Tax... [more]
A0A2E8GIA0_9ACTN3.130e-1428.29Uncharacterized protein n=2 Tax=Acidimicrobiaceae ... [more]
UPI00037123EA3.170e-1429.61hypothetical protein n=1 Tax=Marinobacterium rhizo... [more]
A0A381REV2_9ZZZZ8.460e-1327.80Uncharacterized protein n=1 Tax=marine metagenome ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10Jelly Rollscoord: 12..99
e-value: 8.9E-6
score: 27.8
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10Jelly Rollscoord: 124..215
e-value: 3.3E-9
score: 38.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1062contigA-nodosum_M_contig1062:213613..214781 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1062.16.1mRNA_A-nodosum_M_contig1062.16.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1062 200798..215309 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1062.16.1 ID=prot_A-nodosum_M_contig1062.16.1|Name=mRNA_A-nodosum_M_contig1062.16.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=228bp
MKLLFRCRLYTRLYKALQTSARPGDTSLWHRHSQDTFYVCIEHAVSALNR
PSDKAPYVHHASPGDLWWSMSKNAPFVHQVCLLPENTNSSQFFAMEILKP
PPVVSNSPLMHRSYKLRKDFSRAGLARVYEFKVEPGESTGPHSWDFYGVV
VCLSDGGGKIDAVGDSDSDVQGRRGPFEDGVLSRVGGWKWVEGPVDVDVR
NAGERPYEAIVVEWLGESGEVDGVARL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll