prot_A-nodosum_M_contig106.5.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig106.5.2
Unique Nameprot_A-nodosum_M_contig106.5.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length119
Homology
BLAST of mRNA_A-nodosum_M_contig106.5.2 vs. uniprot
Match: A0A7J7MLT1_9MAGN (Uncharacterized protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7MLT1_9MAGN)

HSP 1 Score: 101 bits (251), Expect = 3.240e-24
Identity = 55/99 (55.56%), Postives = 65/99 (65.66%), Query Frame = 0
Query:   21 WVFFPHAVLLCQTFAHCRKFPTASSRGSLDRVSVPTQAFSLGELLLSLLLMICGMSSHCSLLKVNSHVLLTRPPLKLKTFIRLACVKHTASVHPEPGSS 119
            W    HA LLCQ FAHC KFPTA+SR SL RVSVP     L + LL + L+    S+   L +  S+ LLTRPPL+    +RLACVKH ASVHPEPGS+
Sbjct:  122 WALDLHAALLCQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALLF---SAVIPLPRAGSYALLTRPPLETPLPVRLACVKHAASVHPEPGSN 217          
BLAST of mRNA_A-nodosum_M_contig106.5.2 vs. uniprot
Match: A0A3S3N968_9MAGN (Putative cytochrome c biosynthesis protein n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3N968_9MAGN)

HSP 1 Score: 96.7 bits (239), Expect = 1.080e-22
Identity = 52/99 (52.53%), Postives = 63/99 (63.64%), Query Frame = 0
Query:   21 WVFFPHAVLLCQTFAHCRKFPTASSRGSLDRVSVPTQAFSLGELLLSLLLMICGMSSHCSLLKVNSHVLLTRPPLKLKTFIRLACVKHTASVHPEPGSS 119
            W F+ HA LL Q FAHC KFPTA+SR SL RVSVP     L +    LL++         L +  S+ LLTRPPL+    +RLACV+H ASVHPEPGS+
Sbjct:   95 WAFYLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSD---QLLIIALPFPVVVPLPRAGSYALLTRPPLETPLPVRLACVRHAASVHPEPGSN 190          
BLAST of mRNA_A-nodosum_M_contig106.5.2 vs. uniprot
Match: M1BT56_SOLTU (Unknow protein n=1 Tax=Solanum tuberosum TaxID=4113 RepID=M1BT56_SOLTU)

HSP 1 Score: 95.9 bits (237), Expect = 1.420e-22
Identity = 54/102 (52.94%), Postives = 65/102 (63.73%), Query Frame = 0
Query:   21 WVFFPHAVLLCQTFAHCRKFPTASSRGSLDRVSVPTQAFSLGELLLSLLLMICGMSSHCSLLKVNSHVLLTRPPLK--LKTF-IRLACVKHTASVHPEPGSS 119
            W F+ H  LL Q FAHCRKFPTA+SR SL RVSVP     L +    LL++     +   L +  S+ LLTRPPL+     F +RLACVKH ASVHPEPGS+
Sbjct:   75 WAFYLHTTLLLQAFAHCRKFPTAASRRSLGRVSVPVWLIILSD---QLLIIALPFPAVVPLPRAGSYALLTRPPLETPFPVFPVRLACVKHAASVHPEPGSN 173          
BLAST of mRNA_A-nodosum_M_contig106.5.2 vs. uniprot
Match: A0A162A9Q8_DAUCS (Uncharacterized protein n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A162A9Q8_DAUCS)

HSP 1 Score: 99.0 bits (245), Expect = 1.650e-22
Identity = 53/99 (53.54%), Postives = 64/99 (64.65%), Query Frame = 0
Query:   21 WVFFPHAVLLCQTFAHCRKFPTASSRGSLDRVSVPTQAFSLGELLLSLLLMICGMSSHCSLLKVNSHVLLTRPPLKLKTFIRLACVKHTASVHPEPGSS 119
            W F+ HA LL Q FAHC KFPTA+SR SL RVSVP     L +    LL++     +   L +  S+ LLTRPPL+    +RLACVKH ASVHPEPGS+
Sbjct:  223 WAFYLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSD---QLLIIALPFPAVVPLPRAGSYALLTRPPLETPLPVRLACVKHAASVHPEPGSN 318          
BLAST of mRNA_A-nodosum_M_contig106.5.2 vs. uniprot
Match: A0A6L2M4J0_TANCI (Uncharacterized protein n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2M4J0_TANCI)

HSP 1 Score: 99.0 bits (245), Expect = 1.730e-22
Identity = 53/99 (53.54%), Postives = 64/99 (64.65%), Query Frame = 0
Query:   21 WVFFPHAVLLCQTFAHCRKFPTASSRGSLDRVSVPTQAFSLGELLLSLLLMICGMSSHCSLLKVNSHVLLTRPPLKLKTFIRLACVKHTASVHPEPGSS 119
            W F+ HA LL Q FAHC KFPTA+SR SL RVSVP     L +    LL++     +   L +  S+ LLTRPPL+    +RLACVKH ASVHPEPGS+
Sbjct:  226 WAFYLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSD---QLLIIALPFPAVVPLPRAGSYTLLTRPPLETPLPVRLACVKHAASVHPEPGSN 321          
BLAST of mRNA_A-nodosum_M_contig106.5.2 vs. uniprot
Match: A0A5N6NM02_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NM02_9ASTR)

HSP 1 Score: 99.0 bits (245), Expect = 3.260e-22
Identity = 53/99 (53.54%), Postives = 64/99 (64.65%), Query Frame = 0
Query:   21 WVFFPHAVLLCQTFAHCRKFPTASSRGSLDRVSVPTQAFSLGELLLSLLLMICGMSSHCSLLKVNSHVLLTRPPLKLKTFIRLACVKHTASVHPEPGSS 119
            W F+ HA LL Q FAHC KFPTA+SR SL RVSVP     L +    LL++     +   L +  S+ LLTRPPL+    +RLACVKH ASVHPEPGS+
Sbjct:  276 WAFYLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSD---QLLIIALPFPAVVPLPRAGSYALLTRPPLETPLPVRLACVKHAASVHPEPGSN 371          
BLAST of mRNA_A-nodosum_M_contig106.5.2 vs. uniprot
Match: A0A834FX08_RHOSS (Uncharacterized protein n=3 Tax=asterids TaxID=71274 RepID=A0A834FX08_RHOSS)

HSP 1 Score: 94.4 bits (233), Expect = 3.430e-22
Identity = 51/99 (51.52%), Postives = 63/99 (63.64%), Query Frame = 0
Query:   21 WVFFPHAVLLCQTFAHCRKFPTASSRGSLDRVSVPTQAFSLGELLLSLLLMICGMSSHCSLLKVNSHVLLTRPPLKLKTFIRLACVKHTASVHPEPGSS 119
            W F+ HA LL Q FAHC +F TA+SR SL RVSVP     L +    LL++     +   L +  S+ LLTRPPL+    +RLACVKH ASVHPEPGS+
Sbjct:   58 WAFYLHAALLRQAFAHCGRFRTAASRRSLGRVSVPVWLIILSD---QLLIIALPFPAVVPLPRAGSYALLTRPPLETPLPVRLACVKHAASVHPEPGSN 153          
BLAST of mRNA_A-nodosum_M_contig106.5.2 vs. uniprot
Match: A0A6L2JIW7_TANCI (Uncharacterized protein n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2JIW7_TANCI)

HSP 1 Score: 97.4 bits (241), Expect = 5.200e-22
Identity = 52/99 (52.53%), Postives = 63/99 (63.64%), Query Frame = 0
Query:   21 WVFFPHAVLLCQTFAHCRKFPTASSRGSLDRVSVPTQAFSLGELLLSLLLMICGMSSHCSLLKVNSHVLLTRPPLKLKTFIRLACVKHTASVHPEPGSS 119
            W F+ H  LL Q FAHC KFPTA+SR SL RVSVP     L +    LL++     +   L +  S+ LLTRPPL+    +RLACVKH ASVHPEPGS+
Sbjct:  210 WAFYLHVALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSD---QLLIIALPFPAVVPLPRAGSYALLTRPPLETPLPVRLACVKHAASVHPEPGSN 305          
BLAST of mRNA_A-nodosum_M_contig106.5.2 vs. uniprot
Match: A0A5N6PVU4_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PVU4_9ASTR)

HSP 1 Score: 99.0 bits (245), Expect = 9.280e-22
Identity = 53/99 (53.54%), Postives = 64/99 (64.65%), Query Frame = 0
Query:   21 WVFFPHAVLLCQTFAHCRKFPTASSRGSLDRVSVPTQAFSLGELLLSLLLMICGMSSHCSLLKVNSHVLLTRPPLKLKTFIRLACVKHTASVHPEPGSS 119
            W F+ HA LL Q FAHC KFPTA+SR SL RVSVP     L +    LL++     +   L +  S+ LLTRPPL+    +RLACVKH ASVHPEPGS+
Sbjct:  467 WAFYLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSD---QLLIIALPFPAVVPLPRAGSYALLTRPPLETPLPVRLACVKHAASVHPEPGSN 562          
BLAST of mRNA_A-nodosum_M_contig106.5.2 vs. uniprot
Match: A0A1U8NPX8_GOSHI (RNA-directed DNA polymerase n=1 Tax=Gossypium hirsutum TaxID=3635 RepID=A0A1U8NPX8_GOSHI)

HSP 1 Score: 97.8 bits (242), Expect = 2.660e-21
Identity = 54/105 (51.43%), Postives = 66/105 (62.86%), Query Frame = 0
Query:   15 KRLTTLWVFFPHAVLLCQTFAHCRKFPTASSRGSLDRVSVPTQAFSLGELLLSLLLMICGMSSHCSLLKVNSHVLLTRPPLKLKTFIRLACVKHTASVHPEPGSS 119
            K +  LW F+ HA LL Q FAHC KFPTA+SR SL RVSVP     L +    LL++     +   L +  S+ LLTRPPL+    +RLACVKH ASVHPEP S+
Sbjct:  924 KEVHDLWAFYLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSD---QLLIIALPFPAVVPLPRAGSYALLTRPPLETPLPVRLACVKHAASVHPEPRSN 1025          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig106.5.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7J7MLT1_9MAGN3.240e-2455.56Uncharacterized protein n=1 Tax=Kingdonia uniflora... [more]
A0A3S3N968_9MAGN1.080e-2252.53Putative cytochrome c biosynthesis protein n=1 Tax... [more]
M1BT56_SOLTU1.420e-2252.94Unknow protein n=1 Tax=Solanum tuberosum TaxID=411... [more]
A0A162A9Q8_DAUCS1.650e-2253.54Uncharacterized protein n=2 Tax=Daucus carota subs... [more]
A0A6L2M4J0_TANCI1.730e-2253.54Uncharacterized protein n=1 Tax=Tanacetum cinerari... [more]
A0A5N6NM02_9ASTR3.260e-2253.54Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
A0A834FX08_RHOSS3.430e-2251.52Uncharacterized protein n=3 Tax=asterids TaxID=712... [more]
A0A6L2JIW7_TANCI5.200e-2252.53Uncharacterized protein n=1 Tax=Tanacetum cinerari... [more]
A0A5N6PVU4_9ASTR9.280e-2253.54Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
A0A1U8NPX8_GOSHI2.660e-2151.43RNA-directed DNA polymerase n=1 Tax=Gossypium hirs... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR38146FAMILY NOT NAMEDcoord: 15..118
NoneNo IPR availablePANTHERPTHR38146:SF9SUBFAMILY NOT NAMEDcoord: 15..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig106contigA-nodosum_M_contig106:232761..233195 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig106.5.2mRNA_A-nodosum_M_contig106.5.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig106 231882..233195 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig106.5.2 ID=prot_A-nodosum_M_contig106.5.2|Name=mRNA_A-nodosum_M_contig106.5.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=119bp
MLIRQVTSELLPWQKRLTTLWVFFPHAVLLCQTFAHCRKFPTASSRGSLD
RVSVPTQAFSLGELLLSLLLMICGMSSHCSLLKVNSHVLLTRPPLKLKTF
IRLACVKHTASVHPEPGSS
back to top