prot_A-nodosum_M_contig1056.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1056.3.1
Unique Nameprot_A-nodosum_M_contig1056.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1718
Homology
BLAST of mRNA_A-nodosum_M_contig1056.3.1 vs. uniprot
Match: A0A6H5L6G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6G9_9PHAE)

HSP 1 Score: 340 bits (872), Expect = 6.210e-91
Identity = 260/604 (43.05%), Postives = 325/604 (53.81%), Query Frame = 0
Query: 1160 AKQKRSVARVRVRVRSSVYVLVAYLDERGSLLLNEVVEAEKHRHGARAARVVGLTNESTGNPVDLNVPARRSLSSGDALVAVVATMTSD-------------GRGEVGFVASAESVLGKAPGKVGKEDRPEVMSREHAQPVGDKPTRQRPKTSGDTPNSSRILAEDTKRGGGRSPQQRSTKPKPSRCIASPRDIDQLRDDVARRFFTERQAAGEGVGALRSPFRLHDLPPTSPVTGKGRGASPENSRVTSPRSASPRGALKWPERST------EGGGEGKEESRPASXXXXXXXXXXXYTNFSCFSLRS--HGR----AARSEKAFLAQSTLTPKELGIILKEELVKSHKWSARHRTAQEKVRRVWEERGLDHDRRQRAYEKKEAERRKEIXXXXXVEAQRMAARNRRLAELAESARQHARDSRNTKESRAKEAEAVHQKRLLMISEQKDR------------------------------EKREHARKVHMMGRRREDVRDSFLDLVDNEKETAIQALETPLEILERAVGEGDNKLEKKARRAILRRQAKERVSLRQKXXXXLAEXRRRESVVEESSHTREAVESRMRPGPGQYNIRDFSEFG 1708
            A Q   VARVRV VRSSVY++VA +++ GS+LL++V EAEK RHG  AA V GL NESTG+ VDL +PA RS+SSGD+L+A+VA  +               G G  G    A S  G+ P             R+H +  G +         G  P+  R+   D +  GG                    DID+LRDDVARR + ER  AG G  A  SP R    P  +P+TG GRGASPE+SR TSPRSA   GA   P RS+      +GGG G   SRP S           YT+ S FS+RS  HGR    A  SE AF+AQSTLTP+EL  ILKEEL+KS KWSAR+R AQ+K+ RVWEERG D++R QR +E+ EA R+++      +                                      A H++R+  I++++DR                              E+R HA KV  M RRREDVRDSFLD+VD E ETAIQALETPLE+L RA+ EGD   EKKARRA+LR+ A+ERV +R+K    LA+ RR E       +    VES M PGPGQYN+RDFSE+G
Sbjct: 1488 APQGPEVARVRVSVRSSVYLIVAEVEKDGSILLDQVSEAEKLRHGQNAATVTGLMNESTGDTVDLELPAERSISSGDSLIAIVAGWSPTTSPGARIKQSRRRGAGGEGESGGATSARGRTP------------QRQHHRHDGSR------SREGSRPSLLRLELNDNEGRGG--------------------DIDELRDDVARRLYKERLVAGRGAAAASSPTRPIGSPAITPITGGGRGASPEHSRPTSPRSAXXXGATNRPGRSSPRGSVRDGGGRG---SRPGSPARSVCSAASGYTHCSGFSVRSRGHGRGKGAAGNSEAAFMAQSTLTPEELDGILKEELLKSRKWSARNRNAQDKICRVWEERGADYNRLQREFEEAEAIRQEKARQRREMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHRRRMQQITDRRDRGDALGNSCGRVFVEPEPGSYASPSTFSPAAEQRIHATKVQAMDRRREDVRDSFLDMVDAENETAIQALETPLEMLNRALEEGDEVSEKKARRAMLRQAARERVHVREKAARVLADQRRLEQ-----KNAGRLVESSMMPGPGQYNLRDFSEYG 2045          
BLAST of mRNA_A-nodosum_M_contig1056.3.1 vs. uniprot
Match: D7G0H5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0H5_ECTSI)

HSP 1 Score: 334 bits (857), Expect = 3.550e-89
Identity = 251/543 (46.22%), Postives = 309/543 (56.91%), Query Frame = 0
Query: 1159 DAKQKRSVARVRVRVRSSVYVLVAYLDERGSLLLNEVVEAEKHRHGARAARVVGLTNESTGNPVDLNVPARRSLSSGDALVAVV---ATMTSD-----------GRGEVGFVASAESVLGKAPGKVGKEDRPEVMSREHAQPVGDKPTRQRPKTSGDTPNSSRILAEDTKRGGGRSPQQRSTKPKPSRCIASPRDIDQLRDDVARRFFTERQAAGEGVGALRSPFRLHDLPPTSPVTGKGRGASPENSRVTSPRSASPRGALKWPERST------EGGGEGKEESRPASXXXXXXXXXXXYTNFSCFSLRSHG------RAARSEKAFLAQSTLTPKELGIILKEELVKSHKWSARHRTAQEKVRRVWEERGLDHDRRQRAYEKKEAERRKEIXXXXXVEAQRMAARNRRLAELAESARQHARDSRNTKESRAKEAEAVHQKRLLMISEQKDREKREHARKVHMMGRRREDVRDSFLDLVDNEKETAIQALETPLEILERAVGEGDNKLEKKARRAILRRQAKERVSLRQKXXXXLAEXRRRE 1675
            +A Q   VARVRV VRSSVY++VA +++ GS+LL++V EAEK RHG  AA V GLTNESTG+ VDL+VPA RS+SSGD+L A+V   +  TS            G G  G    A S  G+AP             R+H +  G   +R+     G  P+  R+   D +  GG                    DIDQLRDDVARR + ER  AG G  A  SP R    P  +PVTG GRGASPE+SR TSPRSASPRGA K P RS+      +GGG G   SRP S           YT+ S FS+RS G       A  SE AF+AQSTLTP+EL  ILKEEL+KS KWSAR+R AQ+K+ RVWEERG D++R QR +E+ EA R+ +       E                                         +R+  I++++DRE+R HA KV  M RRREDVRDSFLD+VD E ETAIQALETPLE+L RA+ EGD   EKKARRA+LR+ A+ERV +R+K    LA+ RR E
Sbjct: 1448 EASQGPEVARVRVSVRSSVYLIVAEVEKAGSMLLDQVSEAEKLRHGQNAATVTGLTNESTGDTVDLDVPAERSISSGDSLTAIVVGWSPTTSPPGARTKQSRRLGAGGEGESGGATSARGRAP------------QRQHHRHDGSPRSRE-----GSRPSPLRLEFNDNEGRGG--------------------DIDQLRDDVARRLYKERLLAGRGAAAASSPTRPIGSPAITPVTGGGRGASPEHSRPTSPRSASPRGATKGPGRSSPRGSVRDGGGGG---SRPGSPTRSVCSAASGYTHCSGFSVRSRGPGRGKGAAGNSEAAFMAQSTLTPEELDGILKEELLKSRKWSARNRNAQDKICRVWEERGADYNRLQREFEEAEAIRQDKARQRRETEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRMQQITDRRDREQRMHATKVQAMDRRREDVRDSFLDMVDAENETAIQALETPLEMLNRALEEGDEISEKKARRAMLRQAARERVHVREKAARVLADQRRLE 1950          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1056.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L6G9_9PHAE6.210e-9143.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0H5_ECTSI3.550e-8946.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1514..1541
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1267..1296
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 786..811
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 731..1089
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1384..1399
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 243..320
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 564..609
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1671..1697
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 944..958
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1363..1432
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1413..1427
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1547..1569
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 430..470
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..204
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1005..1045
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 277..317
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 903..917
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1266..1347
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1671..1690
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 334..615
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 338..370

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1056contigA-nodosum_M_contig1056:34070..45024 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1056.3.1mRNA_A-nodosum_M_contig1056.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1056 34063..45318 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1056.3.1 ID=prot_A-nodosum_M_contig1056.3.1|Name=mRNA_A-nodosum_M_contig1056.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1718bp
MQLLFCNAPMIAGTLNYSSVAVLHKILKITVENKRWAALGGLGTRRPYQR
ERTRMAGLEHAEGIQQQSKRPVPDRFVCEFRADFKGLGMSLDVDDEGRLV
VQEVEEDGEAASFADLQQGNLYIVTVGVDRKHPKQPADELLQRLMTLPRP
VSVEFAVTVEPPTTAAVEADAEAVKKSPRDQSLNAKELLHHERQKWERSD
GSLVDEGKATANVALLPSHTPGPASAKAPVDVCFVGEASKAHRRLPREDA
APSTQTPAELEDHPGTTSFPDGDTDQTSPPDRSEDRGDAATEEISSEDAD
GHVDEWRIDKQRGSDARSQRLEMVVGGTSWEENLRKTAAMMGHAHHVDDN
GDDEVDTSRQTRKGFESDKTARACTPRVPEPVMATPKNRKVVERSGDVVP
TPNGSESSAHPWLQKDSDCGDANRDGLPVKQTTHTDEREACNHQRMPPKG
GVGESKHRSPSKKSPAGDYDAHDGDGGSIQGVALSATAGGKKPTDGGRLA
ADAIPSSPSFSDSPSGVVIRTPGKSYYNCFANEAPQSSRDKSGWERPERF
GSAGCGSTMIGVSLKHEGSPSQSNLPRRENVSPPVTIPSQPATGPSATRL
ENGGIDKQSPSRAVQGEGDISPLIQNHIPFMLGWSEGVGAVNEGAAGRGS
LAATVEPLLRLPHTDRPAAIFFGNAPSSGPANARAMYGRVPAPTLPGSGV
IRVPSVIVLPEKSTEDEHRFRRSWSDTVQWGAGRSARSVPGARRSASRGD
GGGSGRGGGGGGGDGGVESEKPVGSSQIRSPYARDGIVSKVDRIEPTRGK
TKAHEKARTLQAQMRLSDGGKRSRSRGDSYVGVGGGGAAATRRKRSGCST
AVARRARHPNKVQRDAGGLFTNDDDDIPSSPPKMSWERQLRTDIGPKNQP
DTTAARPRKDYRKRPSGSCLRLGEASGEKQKEAQSVGKIKDTLDSAYKNS
SSARQILASPSAKPVADACLATGPWSRLRVDVDHVPTRIGARESTGCQAS
EGAEENRQNHCHHGSEAEDEKQQEEVNEQDCKKEEKREGETTLDREESGT
SAPVRAKVASETGNAETIPRGVCSKSQGPARHAPRAAGNATAAGGAASGA
ATATATTATVAAAAAAAAAAATASIAAASEGCWKGFPKGRAAANATEAPA
RSSTLTSADAKQKRSVARVRVRVRSSVYVLVAYLDERGSLLLNEVVEAEK
HRHGARAARVVGLTNESTGNPVDLNVPARRSLSSGDALVAVVATMTSDGR
GEVGFVASAESVLGKAPGKVGKEDRPEVMSREHAQPVGDKPTRQRPKTSG
DTPNSSRILAEDTKRGGGRSPQQRSTKPKPSRCIASPRDIDQLRDDVARR
FFTERQAAGEGVGALRSPFRLHDLPPTSPVTGKGRGASPENSRVTSPRSA
SPRGALKWPERSTEGGGEGKEESRPASPARSARSVASGYTNFSCFSLRSH
GRAARSEKAFLAQSTLTPKELGIILKEELVKSHKWSARHRTAQEKVRRVW
EERGLDHDRRQRAYEKKEAERRKEIRQRQKVEAQRMAARNRRLAELAESA
RQHARDSRNTKESRAKEAEAVHQKRLLMISEQKDREKREHARKVHMMGRR
REDVRDSFLDLVDNEKETAIQALETPLEILERAVGEGDNKLEKKARRAIL
RRQAKERVSLRQKASRVLAEQRRRESVVEESSHTREAVESRMRPGPGQYN
IRDFSEFGGGIYSRPLV*
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