prot_A-nodosum_M_contig1056.20.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1056.20.1
Unique Nameprot_A-nodosum_M_contig1056.20.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length108
Homology
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BLAST of mRNA_A-nodosum_M_contig1056.20.1 vs. uniprot
Match: D7FZF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF3_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 6.300e-26
Identity = 52/76 (68.42%), Postives = 60/76 (78.95%), Query Frame = 0 
Query:    1 MASLQFSEAANVLENVLVRCPGLTLAYYRLGLCLLAARGAHASNQVTRLLDCAMFLEGAENPHLRAAVDLVMRMLR 76
            M+++ FS AA +LE VL RCPGLTLAYYRL LC+LAARG H S+Q   LLDCAM LEG EN HL A VDLV+R+LR
Sbjct:  126 MSAMYFSTAAGILEGVLGRCPGLTLAYYRLALCVLAARGEHGSSQAKLLLDCAMSLEGVENRHLSAGVDLVLRILR 201
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BLAST of mRNA_A-nodosum_M_contig1056.20.1 vs. uniprot
Match: A0A6H5KA32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA32_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 3.950e-25
Identity = 53/76 (69.74%), Postives = 60/76 (78.95%), Query Frame = 0 
Query:    1 MASLQFSEAANVLENVLVRCPGLTLAYYRLGLCLLAARGAHASNQVTRLLDCAMFLEGAENPHLRAAVDLVMRMLR 76
            M+++ FS AA +LE VL RCPGLTLAYYRL LC+LAARG H S Q   LLDCAM LEGAEN HL A VDLV+R+LR
Sbjct:  325 MSAMDFSTAAGILEGVLGRCPGLTLAYYRLALCILAARGEHGSRQAKLLLDCAMSLEGAENRHLSAGVDLVLRILR 400
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1056.20.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZF3_ECTSI6.300e-2668.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KA32_9PHAE3.950e-2569.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1056contigA-nodosum_M_contig1056:176540..180368 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1056.20.1mRNA_A-nodosum_M_contig1056.20.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1056 175568..180831 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1056.20.1 ID=prot_A-nodosum_M_contig1056.20.1|Name=mRNA_A-nodosum_M_contig1056.20.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=108bp
MASLQFSEAANVLENVLVRCPGLTLAYYRLGLCLLAARGAHASNQVTRLL
DCAMFLEGAENPHLRAAVDLVMRMLRNDAIPEESWSEDHPKSLGDLRALE
AALDQLI*
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