prot_A-nodosum_M_contig1055.35.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1055.35.1
Unique Nameprot_A-nodosum_M_contig1055.35.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1963
Homology
BLAST of mRNA_A-nodosum_M_contig1055.35.1 vs. uniprot
Match: D7FLC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLC6_ECTSI)

HSP 1 Score: 213 bits (542), Expect = 1.420e-51
Identity = 198/555 (35.68%), Postives = 259/555 (46.67%), Query Frame = 0
Query:  414 FSFSPTTSPTAAPTSSAGESLRGMTLSIQSVFEGRRRALEVDPSAGKNEIDARRALSVVYQEDAEEYDMAMVHVCAAAVGVEEERIISVFTDFGAEGPMADAARRVLQISTRSSTSSSGTSETAYSQAIIFPSQLTPVTTCEVDLTGGDDVDTRSMTAAAMVDTLFSPEKFVLLLDENRFGPVNAAVSS-IAFWQKECPDDTCPASDGSYASVFPLNEAESQSTVLKTPKDEEIHLLGFIGLGLALVLLACCSWLVFCLCCAGSRSRSPRPKKPKQTIENRYSVQNSWGSDPSPSSEEDGHCASGSVPSETRVIPPPISTERSPTEDV-VEPLSPGEAHWRRMFGLRPS---SHRSAPISPMRTHSNGSGSVASGSKGHSVGSNPFFANDHSDHSGQFKAEKKEKRILIRADGVRSDGISGSGSSKGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASHSGGSSSDGGLVAQSSQPSTSTKDTRDEGVSWKVSRDLNDSEKRKNDPVIRRYAGGADSGVRTPVSSPRKELNRLREALNKPSRGSGQSFNSTSPT 963
            F+ SP+ +P++   S   ES RG+TL IQS+FE RRR   +      +    RRALSVVY+EDAE YD  MV VCA  VGV+ ER+ISV+T FG +G   DAARR L       TSSS + E       I  +QLTPVTTCEVDL+G  + DTRSM AA MVD L  PE FVL +DEN+FGPVN  V+S    W+K  P                   AES+   +K+P + +       G G  L +L+   +         + + SP P     +         S G  P P         SG      R  PP +ST      DV VEP SPGEA WR  FGL P    ++RSAPISP R+       ++ GS   S G  PF+ + + DH            ++  ADG     +                                                 GL   +   S + +      V W VS +++ S +  NDPV+R     A + +   ++SPRKELNRL+EALN+PSR   Q+ +STSPT
Sbjct:  692 FTASPSAAPSSXXXSGGNESSRGITLEIQSIFEARRRRRALSSEVSHDGSSERRALSVVYEEDAEAYDETMVDVCAYMVGVDRERVISVWTSFGPDGAAEDAARRGLM------TSSSSSDEA------IMATQLTPVTTCEVDLSG--EGDTRSMAAATMVDRLMQPENFVLAMDENQFGPVNVVVTSGPTKWRKSKP-------------------AESERYSVKSPPNTKD------GGGAGLAVLSPQRYE------RSATATSPIPDGSSPSCL-------SPGRSPVPPQAXXXPKHSG----RKRTPPPRLSTSPGRGGDVPVEPPSPGEADWRHKFGLGPLRDYTYRSAPISPRRSP------LSVGSASQSAGE-PFYTS-YQDH------------VVAAADGSMGGKV-------------------------------------------------GLTPLADDASAAMESQ----VHWHVSDEVDASVQHNNDPVVRSSLAKAGTVIANAITSPRKELNRLKEALNRPSRL--QACHSTSPT 1115          
BLAST of mRNA_A-nodosum_M_contig1055.35.1 vs. uniprot
Match: A0A6H5JEE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEE7_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 1.760e-42
Identity = 400/1510 (26.49%), Postives = 558/1510 (36.95%), Query Frame = 0
Query:  569 MTAAAMVDTLFSPEKFVLLLDENRFGPVNAAVSSIAFWQKECPDDTCPASDGSYASVFPLNEA-ESQSTVL--KTPKDEEIHLLGFIGLGLALVLLACCSWLVFCLCCAGSRSRSPRPKKPKQTIENRYSVQNSWGSDPSPSSEEDGHCAS---------------------GSVPS---------------------ETRVIPPPISTERSPTEDV-VEPLSPGEAHWRRMFGLRP---SSHRSAPISPMRTHSNGSGSVASGSKGHSVGSNPFFANDHSDHSGQFKAEKKEKRILIRADGVRSDGISGSGSSKGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASHSGGSSSDGGLVAQSSQPSTSTKDTRDEGVSWKVSRDLNDSEKRKNDPVIRRYAGGADSGVRTPVSSPRKELNRLREALNKPSRGSGQSFNSTSPTAXXXXXXXXXXXXXXXXXXNLGSGQFVRKSPSGLQGIHENDLEAAEDGDSSAVQETGEQPVGADTDSKDPNTPPSGRSDLSTSTYSSGDSGSATTFSGETRPKTLAAAAASAAAT-----VGIPCSSFRPGVVSVSCPAYTSPIESRTGSSPASRTDATTPKTSENKTAESPQALRSNDLDETHIN-------------------------RVDDEADTDSG----EAPGKASSAQSLGNTESENSACS-GEPPSMPPLPP-NTNQLVKKDAQEYTLLAATTLGSSRTPGAGGDGDGSKEDENQVEEIRSAAVLDSSESKRATPLGGVLSNFACLRGDQASPCATPRNAAVRSWCGVVTPGSRLPEDDDNDRAIDDEPSVEGKSTALASSRLP------PRPPAKD-----KDDKIGVRVGGGNVAAGGRLTLERALAISRSRSMSPELTPVAEGESEDKAXXXXXXXXXXSSRASPLSSVGGSRHASRDSNVL-----SRARQIASIPPPSAGSPGTV----------GVSLAVVSECSSD---GMRELSPRRPPYPTTSTSPQGRGYSGHTSPDPPALVTPTLSIPSPCVRPPASDSHRDGQDHHVTNAVNALQSAKSKAKGDLCGGWGADDETTTETSKAVRQSVATTEVDNTLSMMMDDVVGGVAQGVEKKADLQETTTIKEHAEDETAEESETFRRVAAGLTENFPPVMDDVGSKAEEAQVKDNSRKDAREGQLIAGDD-MPDLESPAAALPETGMSTIEWTPQPSLPAPPPPTAQSRDKKHRPED-DHPPVFSLTKSLSAFLWKKQRAISQGNINFIPRGQ-------------------------------GVPPVEDVDDEAAPVEGITVSP-SQSLTDWAESKVEDPLVHELESSPAEI-YGLVATGEGQKLNEVSDN----RQPKR-PHLELPSLAVTLCD-DMLESPGDSPFNRAAMNLQSPEP---------RLPQLPMASMXXXXKASTSTLADSVNITSPEGAVTSEN-PDFSPRYDREAIVRSMSVAEEEPDVDGESDIQVPSKLAWPSAR 1913
            M AA MVD L  PE FVL +DEN+FGPVN  V+S      EC D TCPA DGSYASV+P+ E   SQS+V+   T  D E+ LL F  +  AL LLA  SW V CLCC G      + +KPK     RYSV+       SP + +DG  A                      GS PS                       R  PP +ST      DV VEP SPGEA WR  FGL P    ++RSAPISP R+       ++ GS   S G  PF+ + + DH            ++  ADG     +                                                 GL   +   S + +      V W VS +++ S +  NDPV+R     A + +   ++SPRK  +        P+  +  +  S+ P                    +  S  F  ++ S    I+E DLEA E+G                                 +   + G S       G   P+   A +AS   T     V  P  + + G  ++   A  S   SR G          T       T  SP   RS   D +                            +V  E+ T        A G  SS +S+    S +S  S G PP MP LP  N  +   K        AA  + +         G   K DE +     +   L    +  + P GG+LS F C+   Q SP       + R+       GSRLPE DD+D ++ +E  +E ++  +A  R P       RPP        + +++G   GGG+ +A   ++LE+ALA+SRS +M+P+L P+AE  ++  +          SS  S +S   G R   RD   L      +A Q+A+IPPPS+GS G            GV L  ++   SD   G++  SP      TTST    R        D     T  + IPSP  RP +SD   +  +         L                       E  KAV  +                   G A+G    A  ++        +D+  EE  T+                       EA  +      A  G ++  DD +P L SP+      G +        S       T  S+D+    ED D PP FSL  +LSAFL +K         + +                                   G   ++  DD A P      SP S +L  W E+  E      L+    ++    VA  E              ++P + P    P+L +   + D    PG +PF+RAAMNLQSP P          +P LPM       KAS       + + +P+ AV   +  D SP YDREAI R+M+ A++E   DG+SDI V S++ WPS R
Sbjct:    1 MAAATMVDRLMQPENFVLAMDENQFGPVNVVVTS-----NECRDQTCPAGDGSYASVYPIAETPSSQSSVVGEDTTPDNELKLLWFAVIAGALFLLAVLSWCVVCLCCGGPT----KWRKPKPAESERYSVK-------SPPNTKDGGGAGLAVLSPQGNQRSATATSPIPDGSSPSCMSPGRSPVXXXXXXXXXHSGRKRTPPPRLSTSPGRGRDVPVEPPSPGEADWRHKFGLGPLRDHTYRSAPISPRRSP------LSVGSASRSAGG-PFYTS-YQDH------------VVAAADGNMGGKV-------------------------------------------------GLTPLADDASAAMESQ----VHWHVSDEVDASVQHNNDPVVRSSLAKAGTVIANAITSPRKACHST-----SPTVTASSADPSSMPGFFGSEGGFSPGGNNNTFGGSSSSHNFNARASSP---IYEIDLEADENGXXXXXXXXXXXXXXX-------------XXXTGSGLANGGASEGXXAADGSPTPRKGRAGSASFGTTGEDPDVSTPLRTHKAGR-NMFAKAPGSSSRSRVGGXXXXXXHGAT-------TPTSPSNNRSTCTDRSGCGGXXXXXEGVEGGFSVLATAAAFAEVKVGVESPTGRAVRALAAAGGGSSDKSVVADRSGDSVVSDGRPPGMPSLPAANHGETSGKPYGVSRTAAAAAVAAGAVAATKAYGIREKFDEEEDTGGGADPALSPRGAPPSAPFGGMLSGFGCM-APQLSPGKGGARLSPRA-------GSRLPEIDDDDSSLAEEEEME-ENGEVAGKRAPGSCSPFSRPPLNSGTGDGRSERVGQ--GGGSASA---VSLEKALALSRSCTMTPDLKPIAE-MADSGSFTDSEAGSDVSSCLSSMSGRSGYR-VPRDPAALLAAAMEKAGQVAAIPPPSSGSHGRPLSSVQEVPMEGVPLPGLATPESDDECGLKVHSPWDSGSTTTSTVSPLRAAVSKVGVD-----TTVVPIPSPAQRPESSDESGEVTEXXXXXXKKGL-----------------------EAEKAVPGAA------------------GHARGFPSPARSRQE-------QDDEVEERRTWG----------------------EAMQQGEMTAAAMSGTVLCHDDGVPALASPSPTAAPAGAAGQXXXXXXSGA-----TGSSQDESSVGEDADKPPAFSLKSALSAFLGRKDNGGVVAPADSVDEXXXXXXXGXXXXXXXXXXXXXXXXXXXXXEEPIGTVTIDAADDSATP--DFARSPESHTLDMWPEAIGETTSKTSLDEGFVDVKISHVAMEEXXXXXXXXXXAMLLQEPAQGPAAHTPTLVIQAEEADASLKPGQTPFSRAAMNLQSPGPDSPKALQEVTMPALPMPPSPSMPKAS-------MTLQTPKTAVNPRHISDASPMYDREAIARAMAQADQEQ--DGDSDIVV-SRVEWPSER 1284          
BLAST of mRNA_A-nodosum_M_contig1055.35.1 vs. uniprot
Match: A0A6H5JBT3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBT3_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 4.150e-15
Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 0
Query:  121 LTVEFVIDLCDFCDKYGGRDFNPIDSFHYTDAEGNEPNERMDAYKLKIPCDGLRGGAIDSVVATPAP----TPSPT 192
            +++EF +DLC +CD Y    FNPID+F Y DAEGNEPN+R   Y+LK+ C G+ G  ++S+ ATPAP    TPSPT
Sbjct:    1 MSLEFRLDLCGYCDTYNNGSFNPIDTFQYEDAEGNEPNDRKSGYQLKLDCAGIEGDPVESINATPAPVRPPTPSPT 76          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1055.35.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FLC6_ECTSI1.420e-5135.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEE7_9PHAE1.760e-4226.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBT3_9PHAE4.150e-1553.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 246..271
score: 33.85
coord: 208..224
score: 35.29
coord: 187..208
score: 32.73
coord: 226..243
score: 43.33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 802..820
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 683..1255
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1384..1414
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1920..1962
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1369..1383
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1809..1851
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 826..892
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 893..918
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1138..1155
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 357..371
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 402..422
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1884..1905
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 949..993
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 342..356
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1618..1640
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1723..1749
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 765..799
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1158..1179
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1097..1137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 690..714
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1221..1235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1015..1064
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1678..1692
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..341
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1284..1517
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..371
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1600..1694
NoneNo IPR availablePANTHERPTHR15071MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBERcoord: 322..385
NoneNo IPR availablePANTHERPTHR15071MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBERcoord: 106..244
NoneNo IPR availablePANTHERPTHR15071:SF20SUBFAMILY NOT NAMEDcoord: 322..385
coord: 275..337
NoneNo IPR availablePANTHERPTHR15071:SF20SUBFAMILY NOT NAMEDcoord: 106..244
NoneNo IPR availablePANTHERPTHR15071MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBERcoord: 275..337

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1055contigA-nodosum_M_contig1055:216773..234688 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1055.35.1mRNA_A-nodosum_M_contig1055.35.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1055 216317..237223 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1055.35.1 ID=prot_A-nodosum_M_contig1055.35.1|Name=mRNA_A-nodosum_M_contig1055.35.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1963bp
MKLIMLPYLAQLLFMVQLLRRGLPLGSATQTKSLLGEDPSCVTFEVVPAP
AARSNSECAAVLISTTLVASTTSCATDAELVMVVEGTPRDLNTYGGMDNF
ASMEGNQISWTLPTITVDAPLTVEFVIDLCDFCDKYGGRDFNPIDSFHYT
DAEGNEPNERMDAYKLKIPCDGLRGGAIDSVVATPAPTPSPTRTPTPSPT
KAPTPLPTKAPTLPPTKAPTPPPTKAPTPAPTNAPVPPPTTKPTISPTKM
PTTSPSPAPTLPPTEIPTTSPSEALTLSPTKAPTKSPTMAPTQSPTKAPT
LSPTEAPTQSPTRAPTISPTRAPTRSPTIAPTQSPTKVPTHFPTKAPTPS
PTKDPTQSPTRTPTLSPTKAPTPVPTVMQTEARVVATGSPGDSVSSVDID
TGAPTMNPSGYTPFSFSPTTSPTAAPTSSAGESLRGMTLSIQSVFEGRRR
ALEVDPSAGKNEIDARRALSVVYQEDAEEYDMAMVHVCAAAVGVEEERII
SVFTDFGAEGPMADAARRVLQISTRSSTSSSGTSETAYSQAIIFPSQLTP
VTTCEVDLTGGDDVDTRSMTAAAMVDTLFSPEKFVLLLDENRFGPVNAAV
SSIAFWQKECPDDTCPASDGSYASVFPLNEAESQSTVLKTPKDEEIHLLG
FIGLGLALVLLACCSWLVFCLCCAGSRSRSPRPKKPKQTIENRYSVQNSW
GSDPSPSSEEDGHCASGSVPSETRVIPPPISTERSPTEDVVEPLSPGEAH
WRRMFGLRPSSHRSAPISPMRTHSNGSGSVASGSKGHSVGSNPFFANDHS
DHSGQFKAEKKEKRILIRADGVRSDGISGSGSSKGSGSGRENNSGSNSGT
NSGSNSDVNSGGNNGASHSGGSSSDGGLVAQSSQPSTSTKDTRDEGVSWK
VSRDLNDSEKRKNDPVIRRYAGGADSGVRTPVSSPRKELNRLREALNKPS
RGSGQSFNSTSPTATVSSQSQGQGSCSTSPNVNLGSGQFVRKSPSGLQGI
HENDLEAAEDGDSSAVQETGEQPVGADTDSKDPNTPPSGRSDLSTSTYSS
GDSGSATTFSGETRPKTLAAAAASAAATVGIPCSSFRPGVVSVSCPAYTS
PIESRTGSSPASRTDATTPKTSENKTAESPQALRSNDLDETHINRVDDEA
DTDSGEAPGKASSAQSLGNTESENSACSGEPPSMPPLPPNTNQLVKKDAQ
EYTLLAATTLGSSRTPGAGGDGDGSKEDENQVEEIRSAAVLDSSESKRAT
PLGGVLSNFACLRGDQASPCATPRNAAVRSWCGVVTPGSRLPEDDDNDRA
IDDEPSVEGKSTALASSRLPPRPPAKDKDDKIGVRVGGGNVAAGGRLTLE
RALAISRSRSMSPELTPVAEGESEDKASTDSETESEISSRASPLSSVGGS
RHASRDSNVLSRARQIASIPPPSAGSPGTVGVSLAVVSECSSDGMRELSP
RRPPYPTTSTSPQGRGYSGHTSPDPPALVTPTLSIPSPCVRPPASDSHRD
GQDHHVTNAVNALQSAKSKAKGDLCGGWGADDETTTETSKAVRQSVATTE
VDNTLSMMMDDVVGGVAQGVEKKADLQETTTIKEHAEDETAEESETFRRV
AAGLTENFPPVMDDVGSKAEEAQVKDNSRKDAREGQLIAGDDMPDLESPA
AALPETGMSTIEWTPQPSLPAPPPPTAQSRDKKHRPEDDHPPVFSLTKSL
SAFLWKKQRAISQGNINFIPRGQGVPPVEDVDDEAAPVEGITVSPSQSLT
DWAESKVEDPLVHELESSPAEIYGLVATGEGQKLNEVSDNRQPKRPHLEL
PSLAVTLCDDMLESPGDSPFNRAAMNLQSPEPRLPQLPMASMPDLPKAST
STLADSVNITSPEGAVTSENPDFSPRYDREAIVRSMSVAEEEPDVDGESD
IQVPSKLAWPSARLAASGARAVLADGGGSSGSGHSPGRAPRMHGDSRRTS
SSGNYYRYHDCD*
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