prot_A-nodosum_M_contig1055.20.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1055.20.1
Unique Nameprot_A-nodosum_M_contig1055.20.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length103
Homology
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BLAST of mRNA_A-nodosum_M_contig1055.20.1 vs. uniprot
Match: A0A7S3Y115_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y115_HETAK)

HSP 1 Score: 55.5 bits (132), Expect = 2.340e-7
Identity = 38/98 (38.78%), Postives = 58/98 (59.18%), Query Frame = 0 
Query:    8 APAPEVVANHFVRQYYGRMMMEEPAEVMRFYSEDSTFVFESGTKEEAA-----------KLQHLGLVTAERIDVDGDDSVDAKSTSEGEILIKVTGWV 94
            +P P  VA  FV  YY R++ ++PAE+ RFY E+S+F F  G   EAA           K+  LGL  A +++V G  SVDA+++ +G +++ VTG +
Sbjct:    5 SPPPSTVATSFVAHYY-RVLSKKPAELFRFYKEESSFTF--GAPGEAAEPVTGIEAIKTKITGLGLEGA-KVEV-GQGSVDAQASRDGGVVMLVTGTI 97
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1055.20.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S3Y115_HETAK2.340e-738.78Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002075Nuclear transport factor 2 domainPFAMPF02136NTF2coord: 14..102
e-value: 2.3E-7
score: 31.4
NoneNo IPR availableGENE3D3.10.450.50coord: 5..103
e-value: 7.8E-13
score: 50.6
IPR018222Nuclear transport factor 2, eukaryotePROSITEPS50177NTF2_DOMAINcoord: 14..103
score: 11.408325
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 8..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1055contigA-nodosum_M_contig1055:111273..123480 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1055.20.1mRNA_A-nodosum_M_contig1055.20.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1055 111273..126280 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1055.20.1 ID=prot_A-nodosum_M_contig1055.20.1|Name=mRNA_A-nodosum_M_contig1055.20.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=103bp
MSPPERTAPAPEVVANHFVRQYYGRMMMEEPAEVMRFYSEDSTFVFESGT
KEEAAKLQHLGLVTAERIDVDGDDSVDAKSTSEGEILIKVTGWVTTSAME
PRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002075NTF2_dom
IPR018222Nuclear_transport_factor_2_euk
IPR032710NTF2-like_dom_sf