prot_A-nodosum_M_contig10545.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig10545.2.1
Unique Nameprot_A-nodosum_M_contig10545.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length167
Homology
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BLAST of mRNA_A-nodosum_M_contig10545.2.1 vs. uniprot
Match: M1EYI5_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=7 Tax=Fucales TaxID=3009 RepID=M1EYI5_9PHAE)

HSP 1 Score: 318 bits (815), Expect = 3.990e-107
Identity = 158/164 (96.34%), Postives = 160/164 (97.56%), Query Frame = 0 
Query:    1 MLLTDRNFNTTFFDPAGGGDPVLYQYLFCFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATNMIIAVPTGIKFFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGAVLANSGVDIALHDTY 164
            MLLTDRNFNTTFFDPAGGGDPVLYQ+LF FFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT MIIAVPTGIK FSWIATMWGGSIRLKTPMLF+IGFLFLFTIGGLTG VLANSGVDIALHDTY
Sbjct:  179 MLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT-MIIAVPTGIKIFSWIATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTY 341
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BLAST of mRNA_A-nodosum_M_contig10545.2.1 vs. uniprot
Match: M1F017_SARFS (Cytochrome c oxidase subunit 1 (Fragment) n=4 Tax=Fucales TaxID=3009 RepID=M1F017_SARFS)

HSP 1 Score: 318 bits (814), Expect = 2.270e-106
Identity = 157/164 (95.73%), Postives = 160/164 (97.56%), Query Frame = 0 
Query:    1 MLLTDRNFNTTFFDPAGGGDPVLYQYLFCFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATNMIIAVPTGIKFFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGAVLANSGVDIALHDTY 164
            MLLTDRNFNTTFFDPAGGGDPVLYQ+LF FFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT MIIAVPTGIK FSW+ATMWGGSIRLKTPMLF+IGFLFLFTIGGLTG VLANSGVDIALHDTY
Sbjct:  179 MLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT-MIIAVPTGIKIFSWVATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTY 341
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BLAST of mRNA_A-nodosum_M_contig10545.2.1 vs. uniprot
Match: A0A0U4ZTN0_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=8 Tax=Phaeophyceae TaxID=2870 RepID=A0A0U4ZTN0_9PHAE)

HSP 1 Score: 316 bits (809), Expect = 5.170e-105
Identity = 156/164 (95.12%), Postives = 160/164 (97.56%), Query Frame = 0 
Query:    1 MLLTDRNFNTTFFDPAGGGDPVLYQYLFCFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATNMIIAVPTGIKFFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGAVLANSGVDIALHDTY 164
            MLLTDRNFNTTFFDPAGGGDPVLYQ+LF FFGHPEVYILILPGFGIVSHIL+TF+RKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT MIIAVPTGIK FSWIAT+WGGSIRLKTPMLFAIGFLFLFTIGGLTG VLANSGVDIALHDTY
Sbjct:  131 MLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHILSTFARKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT-MIIAVPTGIKIFSWIATLWGGSIRLKTPMLFAIGFLFLFTIGGLTGVVLANSGVDIALHDTY 293
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BLAST of mRNA_A-nodosum_M_contig10545.2.1 vs. uniprot
Match: A0A0U1XAH8_SARHM (Cytochrome c oxidase subunit 1 n=118 Tax=Phaeophyceae TaxID=2870 RepID=A0A0U1XAH8_SARHM)

HSP 1 Score: 318 bits (815), Expect = 1.240e-104
Identity = 158/164 (96.34%), Postives = 160/164 (97.56%), Query Frame = 0 
Query:    1 MLLTDRNFNTTFFDPAGGGDPVLYQYLFCFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATNMIIAVPTGIKFFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGAVLANSGVDIALHDTY 164
            MLLTDRNFNTTFFDPAGGGDPVLYQ+LF FFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT MIIAVPTGIK FSWIATMWGGSIRLKTPMLF+IGFLFLFTIGGLTG VLANSGVDIALHDTY
Sbjct:  234 MLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT-MIIAVPTGIKIFSWIATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTY 396
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BLAST of mRNA_A-nodosum_M_contig10545.2.1 vs. uniprot
Match: A0A1L6KY02_9PHAE (Cytochrome c oxidase subunit 1 n=1 Tax=Sargassum fluitans TaxID=143163 RepID=A0A1L6KY02_9PHAE)

HSP 1 Score: 318 bits (815), Expect = 1.240e-104
Identity = 158/164 (96.34%), Postives = 160/164 (97.56%), Query Frame = 0 
Query:    1 MLLTDRNFNTTFFDPAGGGDPVLYQYLFCFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATNMIIAVPTGIKFFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGAVLANSGVDIALHDTY 164
            MLLTDRNFNTTFFDPAGGGDPVLYQ+LF FFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT MIIAVPTGIK FSWIATMWGGSIRLKTPMLF+IGFLFLFTIGGLTG VLANSGVDIALHDTY
Sbjct:  234 MLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT-MIIAVPTGIKIFSWIATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTY 396
[Close]
BLAST of mRNA_A-nodosum_M_contig10545.2.1 vs. uniprot
Match: D4HL93_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=24 Tax=Fucales TaxID=3009 RepID=D4HL93_9PHAE)

HSP 1 Score: 313 bits (802), Expect = 4.360e-104
Identity = 156/164 (95.12%), Postives = 158/164 (96.34%), Query Frame = 0 
Query:    1 MLLTDRNFNTTFFDPAGGGDPVLYQYLFCFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATNMIIAVPTGIKFFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGAVLANSGVDIALHDTY 164
            MLLTDRNFNTTFFDPAGGGDPVLYQ+L   FGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT MIIAVPTGIK FSWIATMWGGSIRLKTPMLF+IGFLFLFTIGGLTG VLANSGVDIALHDTY
Sbjct:  193 MLLTDRNFNTTFFDPAGGGDPVLYQHLXXXFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT-MIIAVPTGIKIFSWIATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTY 355
[Close]
BLAST of mRNA_A-nodosum_M_contig10545.2.1 vs. uniprot
Match: D6MQN4_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=15 Tax=Phaeophyceae TaxID=2870 RepID=D6MQN4_9PHAE)

HSP 1 Score: 311 bits (796), Expect = 3.530e-103
Identity = 154/164 (93.90%), Postives = 158/164 (96.34%), Query Frame = 0 
Query:    1 MLLTDRNFNTTFFDPAGGGDPVLYQYLFCFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATNMIIAVPTGIKFFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGAVLANSGVDIALHDTY 164
            MLLTDRNFNTTFFDPAGGGDPVLYQ+L   FGHPEVYILILPGFGIVSHIL+TFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT MIIAVPTGIK FSWIAT+WGGSIRLKTPMLF+IGFLFLFTIGGLTG VLANSGVDIALHDTY
Sbjct:  193 MLLTDRNFNTTFFDPAGGGDPVLYQHLXXXFGHPEVYILILPGFGIVSHILSTFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT-MIIAVPTGIKIFSWIATLWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTY 355
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BLAST of mRNA_A-nodosum_M_contig10545.2.1 vs. uniprot
Match: E6ZES6_ECTSI (Cytochrome c oxidase subunit 1 n=691 Tax=Phaeophyceae TaxID=2870 RepID=E6ZES6_ECTSI)

HSP 1 Score: 314 bits (804), Expect = 5.990e-103
Identity = 153/164 (93.29%), Postives = 160/164 (97.56%), Query Frame = 0 
Query:    1 MLLTDRNFNTTFFDPAGGGDPVLYQYLFCFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATNMIIAVPTGIKFFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGAVLANSGVDIALHDTY 164
            MLLTDRNFNTTFFDPAGGGDPVLYQ+LF FFGHPEVYILILPGFGI+SHIL+TF+RKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT MIIAVPTGIK FSWIAT+WGGSIRLKTPMLF+IGFLFLFTIGGLTG VLANSG+DIALHDTY
Sbjct:  235 MLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIISHILSTFARKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT-MIIAVPTGIKIFSWIATLWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGIDIALHDTY 397
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BLAST of mRNA_A-nodosum_M_contig10545.2.1 vs. uniprot
Match: A0A453HT52_AEGTS (Cytochrome c oxidase subunit 1 n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453HT52_AEGTS)

HSP 1 Score: 308 bits (788), Expect = 6.950e-103
Identity = 146/164 (89.02%), Postives = 159/164 (96.95%), Query Frame = 0 
Query:    1 MLLTDRNFNTTFFDPAGGGDPVLYQYLFCFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATNMIIAVPTGIKFFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGAVLANSGVDIALHDTY 164
            MLLTDRNFNTTFFDPAGGGDP+LYQ+LF FFGHPEVYILILPGFGI+SHI++TFSRKPVFGYLGMVYAM+SIG+LGF+VWAHHMFTVGLD+DTRAYFTAAT MIIAVPTGIK FSWIATMWGGSI+ KTPMLFA+GF+FLFTIGGLTG VLANSG+DIALHDTY
Sbjct:   38 MLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAAT-MIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTY 200
[Close]
BLAST of mRNA_A-nodosum_M_contig10545.2.1 vs. uniprot
Match: D4HLA4_PETFA (Cytochrome c oxidase subunit 1 (Fragment) n=12 Tax=Ectocarpales TaxID=2877 RepID=D4HLA4_PETFA)

HSP 1 Score: 310 bits (794), Expect = 7.100e-103
Identity = 152/164 (92.68%), Postives = 158/164 (96.34%), Query Frame = 0 
Query:    1 MLLTDRNFNTTFFDPAGGGDPVLYQYLFCFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATNMIIAVPTGIKFFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGAVLANSGVDIALHDTY 164
            MLLTDRNFNTTFFDPAGGGDPVLYQ+L   FGHPEVYILILPGFGIVSH+LATF+RKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT MIIAVPTGIK FSWIAT+WGGSIRLKTPMLF+IGFLFLFTIGGLTG VLANSG+DIALHDTY
Sbjct:  193 MLLTDRNFNTTFFDPAGGGDPVLYQHLXXXFGHPEVYILILPGFGIVSHVLATFARKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAAT-MIIAVPTGIKIFSWIATLWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGIDIALHDTY 355
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10545.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
M1EYI5_9PHAE3.990e-10796.34Cytochrome c oxidase subunit 1 (Fragment) n=7 Tax=... [more]
M1F017_SARFS2.270e-10695.73Cytochrome c oxidase subunit 1 (Fragment) n=4 Tax=... [more]
A0A0U4ZTN0_9PHAE5.170e-10595.12Cytochrome c oxidase subunit 1 (Fragment) n=8 Tax=... [more]
A0A0U1XAH8_SARHM1.240e-10496.34Cytochrome c oxidase subunit 1 n=118 Tax=Phaeophyc... [more]
A0A1L6KY02_9PHAE1.240e-10496.34Cytochrome c oxidase subunit 1 n=1 Tax=Sargassum f... [more]
D4HL93_9PHAE4.360e-10495.12Cytochrome c oxidase subunit 1 (Fragment) n=24 Tax... [more]
D6MQN4_9PHAE3.530e-10393.90Cytochrome c oxidase subunit 1 (Fragment) n=15 Tax... [more]
E6ZES6_ECTSI5.990e-10393.29Cytochrome c oxidase subunit 1 n=691 Tax=Phaeophyc... [more]
A0A453HT52_AEGTS6.950e-10389.02Cytochrome c oxidase subunit 1 n=1 Tax=Aegilops ta... [more]
D4HLA4_PETFA7.100e-10392.68Cytochrome c oxidase subunit 1 (Fragment) n=12 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000883Cytochrome c oxidase subunit IPRINTSPR01165CYCOXIDASEIcoord: 133..151
score: 69.3
coord: 73..88
score: 84.78
coord: 161..166
score: 18.99
coord: 5..26
score: 76.56
IPR000883Cytochrome c oxidase subunit IPFAMPF00115COX1coord: 1..165
e-value: 1.1E-58
score: 199.1
IPR000883Cytochrome c oxidase subunit IPANTHERPTHR10422CYTOCHROME C OXIDASE SUBUNIT 1coord: 1..164
IPR036927Cytochrome c oxidase-like, subunit I superfamilyGENE3D1.20.210.10coord: 1..166
e-value: 1.6E-78
score: 266.3
IPR036927Cytochrome c oxidase-like, subunit I superfamilySUPERFAMILY81442Cytochrome c oxidase subunit I-likecoord: 1..165
NoneNo IPR availablePANTHERPTHR10422:SF18CYTOCHROME C OXIDASE SUBUNIT 1coord: 1..164
IPR023616Cytochrome c oxidase-like, subunit I domainPROSITEPS50855COX1coord: 1..166
score: 46.282551

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10545contigA-nodosum_M_contig10545:14321..14821 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10545.2.1mRNA_A-nodosum_M_contig10545.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig10545 14321..14821 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig10545.2.1 ID=prot_A-nodosum_M_contig10545.2.1|Name=mRNA_A-nodosum_M_contig10545.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=167bp
MLLTDRNFNTTFFDPAGGGDPVLYQYLFCFFGHPEVYILILPGFGIVSHI
LATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAA
TNMIIAVPTGIKFFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGAV
LANSGVDIALHDTYIM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000883Cyt_C_Oxase_1
IPR036927Cyt_c_oxase-like_su1_sf
IPR023616Cyt_c_oxase-like_su1_dom