prot_A-nodosum_M_contig1054.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1054.1.1
Unique Nameprot_A-nodosum_M_contig1054.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length181
Homology
BLAST of mRNA_A-nodosum_M_contig1054.1.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 2.270e-35
Identity = 70/179 (39.11%), Postives = 111/179 (62.01%), Query Frame = 0
Query:    2 YTDCAFERDWHKEILEMNQMAFVKNMVEQYNISATSNIPKTSGVDLEPRKNGEPGGNEEFPKYRALVRSLMWLSVMTRPDIANALRACARHSHNPSPRHRKALLQVIAYVNVTKEIGLRFVRGSGLRLSVYADAVCTAASNDRRSLSGVAVMLGDTAIGWKSSTQKYVTTATCEAEHVA 180
            Y  CA ERD       ++Q A++  +++++ I+ T++ P     DL P+++ EPG ++     R  +  LMW +  TRPDIA AL A  R++H P+ R  KAL+Q+++Y+N T ++G+ +VRGSGL L VY DA        RRS++G+AV +G T +   S TQ+ V+ +T EAE++A
Sbjct: 1520 YDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNADLGPKRDDEPGVDKPV---RQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGSGLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIA 1695          
BLAST of mRNA_A-nodosum_M_contig1054.1.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 7.580e-35
Identity = 69/179 (38.55%), Postives = 111/179 (62.01%), Query Frame = 0
Query:    2 YTDCAFERDWHKEILEMNQMAFVKNMVEQYNISATSNIPKTSGVDLEPRKNGEPGGNEEFPKYRALVRSLMWLSVMTRPDIANALRACARHSHNPSPRHRKALLQVIAYVNVTKEIGLRFVRGSGLRLSVYADAVCTAASNDRRSLSGVAVMLGDTAIGWKSSTQKYVTTATCEAEHVA 180
            Y  CA ERD       ++Q A++  +++++ I+ T++ P     +L P+++ EPG ++     R  +  LMW +  TRPDIA AL A  R++H P+ R  KAL+Q+++Y+N T ++G+ +VRGSGL L VY DA        RRS++G+AV +G T +   S TQ+ V+ +T EAE++A
Sbjct:  967 YDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNAELGPKRDDEPGVDKPV---RQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGSGLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIA 1142          
BLAST of mRNA_A-nodosum_M_contig1054.1.1 vs. uniprot
Match: A0A6H5JSU5_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSU5_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 3.010e-32
Identity = 68/179 (37.99%), Postives = 117/179 (65.36%), Query Frame = 0
Query:    2 YTDCAFERDWHKEILEMNQMAFVKNMVEQYNISATSNIPKTSGVDLEPRKNGEPGGNEEFPKYRALVRSLMWLSVMTRPDIANALRACARHSHNPSPRHRKALLQVIAYVNVTKEIGLRFVRGSGLRLSVYADAVCTAASNDRRSLSGVAVMLGDTAIGWKSSTQKYVTTATCEAEHVA 180
            +  CA ERD     L ++Q A++ +MV+++++ +TS IP +  VDL P ++ E GG  + P  R  + S+M +S  +RPD++ A+RA A H+H P+ RH  A+ +++ Y+  T+++G+ + RGSGL L+VY DA   A + +RRS+SG+A M+G T +   S T+  V+ ++ EA+++A
Sbjct:  453 FDGCATERDVEAGTLRISQTAYIDSMVKRFDVQSTSRIPASPSVDLGPERDDEKGG--KCP-VREAIGSMMCVSTFSRPDVSFAVRAVACHAHAPAKRHWDAIQKILGYLKETRDVGITYKRGSGLELAVYVDA-SYADTENRRSVSGLATMVGGTVVSHGSKTKSIVSLSSTEAKYIA 627          
BLAST of mRNA_A-nodosum_M_contig1054.1.1 vs. uniprot
Match: A0A6H5JQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQD0_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 6.080e-32
Identity = 70/182 (38.46%), Postives = 109/182 (59.89%), Query Frame = 0
Query:    2 YTDCAFERDWHKEILEMNQMAFVKNMVEQYNISATSNIPKTSGVDLEPRKNGEPGGNEEFPKYRALVRSLMWLSVMTRPDIANALRACARHSHNPSPRHRKALLQVIAYVNVTKEIGLRFVRGSGLRLS--VYADAVCTAASNDRRSLSGVAVMLGDTAIGWKSSTQKYVTTATCEAEHVAL 181
            +  CAF RD     +EM+Q +++++++E++N+  TS+IP +   D       E  G+  F   R +V SLMW++  TRPDI+NA+RA ARHSH P   H KA  +++ Y+  T  + L+F     +  S  VY DA   + +NDRRS+SG  V++    + W S TQK V+ +T EAE++A+
Sbjct:  213 FLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPASPTNDYRSVMEDEGAGDVPF---REVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDKSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAM 391          
BLAST of mRNA_A-nodosum_M_contig1054.1.1 vs. uniprot
Match: A0A6H5KGA6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGA6_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 8.430e-32
Identity = 69/182 (37.91%), Postives = 112/182 (61.54%), Query Frame = 0
Query:    2 YTDCAFERDWHKEILEMNQMAFVKNMVEQYNISATSNIPKTSGVDLEPRKNGEPGGNEEFPKYRALVRSLMWLSVMTRPDIANALRACARHSHNPSPRHRKALLQVIAYVNVTKEIGLRFVRGSGLRLS--VYADAVCTAASNDRRSLSGVAVMLGDTAIGWKSSTQKYVTTATCEAEHVAL 181
            +  CAF RD     +EM+Q +++++++E++N+  TS+IP +   D +     E  G  + P +R +V SLMW++  TRPDI+NA+RA ARHSH P   H KA  +++ Y+     + L++ + + + +   VY DA   + + DRRS+SG  V++ D  + W S TQK VT +T EAE+VA+
Sbjct:   95 FLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPASLTNDYKSVMEDE--GARDVP-FREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHGKAAQKILNYLLEAAHLTLKYKQDTMVDVGTLVYVDADFASKATDRRSVSGALVLVADCLVAWISRTQKCVTLSTTEAEYVAM 273          
BLAST of mRNA_A-nodosum_M_contig1054.1.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 5.770e-31
Identity = 70/182 (38.46%), Postives = 110/182 (60.44%), Query Frame = 0
Query:    2 YTDCAFERDWHKEILEMNQMAFVKNMVEQYNISATSNIPKTSGVDLEPRKNGEPGGNEEFPKYRALVRSLMWLSVMTRPDIANALRACARHSHNPSPRHRKALLQVIAYVNVTKEIGLRFVRGSGLRLS--VYADAVCTAASNDRRSLSGVAVMLGDTAIGWKSSTQKYVTTATCEAEHVAL 181
            +  CAF RD     +EM+Q +++++++E++N+  TS+IP +   D       E  G+  F   R +V SLMW++  TRPDI+NA+RA ARHSH P   H KA  +++ Y+  T  + L+F   + +  S  VY DA   + +NDRRS+SG  V++    + W S TQK V+ +T EAE++A+
Sbjct:  679 FLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPASPTNDYRSVMEDEGAGDVPF---REVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAM 857          
BLAST of mRNA_A-nodosum_M_contig1054.1.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 5.960e-31
Identity = 70/182 (38.46%), Postives = 110/182 (60.44%), Query Frame = 0
Query:    2 YTDCAFERDWHKEILEMNQMAFVKNMVEQYNISATSNIPKTSGVDLEPRKNGEPGGNEEFPKYRALVRSLMWLSVMTRPDIANALRACARHSHNPSPRHRKALLQVIAYVNVTKEIGLRFVRGSGLRLS--VYADAVCTAASNDRRSLSGVAVMLGDTAIGWKSSTQKYVTTATCEAEHVAL 181
            +  CAF RD     +EM+Q +++++++E++N+  TS+IP +   D       E  G+  F   R +V SLMW++  TRPDI+NA+RA ARHSH P   H KA  +++ Y+  T  + L+F   + +  S  VY DA   + +NDRRS+SG  V++    + W S TQK V+ +T EAE++A+
Sbjct:  946 FLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPASPTNDYRSVMEDEGAGDVPF---REVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAM 1124          
BLAST of mRNA_A-nodosum_M_contig1054.1.1 vs. uniprot
Match: A0A6H5KN43_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN43_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 1.150e-30
Identity = 70/182 (38.46%), Postives = 111/182 (60.99%), Query Frame = 0
Query:    2 YTDCAFERDWHKEILEMNQMAFVKNMVEQYNISATSNIPKTSGVDLEPRKNGEPGGNEEFPKYRALVRSLMWLSVMTRPDIANALRACARHSHNPSPRHRKALLQVIAYVNVTKEIGLRFVRGSGLRLS--VYADAVCTAASNDRRSLSGVAVMLGDTAIGWKSSTQKYVTTATCEAEHVAL 181
            +  CAF RD     +EM+Q +++++++E++N+  TS+IP +   D       E  G+  F   R +V SLMW++  TRPDI+NA+RA ARHSH P+  H KA  +++ Y+  T  + L++ + + + +   VY DA   + + DRRS SG  V++ D  + W S TQK VT +T EAE+VA+
Sbjct:  380 FLGCAFARDREAGTIEMSQESYIRSVLERFNVCRTSSIPASLTNDYRSVIEDEGAGDVPF---RDVVGSLMWIANQTRPDISNAVRAVARHSHEPNKSHWKAAQKILNYLLETAHLTLKYKQDTMVDVGTLVYVDADFASEATDRRSDSGALVLVADCLVAWISRTQKCVTLSTTEAEYVAM 558          
BLAST of mRNA_A-nodosum_M_contig1054.1.1 vs. uniprot
Match: A0A6H5JWK8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWK8_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 5.360e-29
Identity = 72/182 (39.56%), Postives = 105/182 (57.69%), Query Frame = 0
Query:    2 YTDCAFERDWHKEILEMNQMAFVKNMVEQYNISATSNIPKTSGVDLEPRKNGEPGGNEEFPKYRALVRSLMWLSVMTRPDIANALRACARHSHNPSPRHRKALLQVIAYVNVTKEIGLRFVRG--SGLRLSVYADAVCTAASNDRRSLSGVAVMLGDTAIGWKSSTQKYVTTATCEAEHVAL 181
            Y+ C +ERD     L ++Q  + K + E++ +     IP  +   L      EP  + E+P +RAL+ SL+W++++TRPDIANA+RA AR+   P   H +A L ++ Y   T   G+ F RG  SG  L  +ADA   + + DRRS+SG  VM    AI W S TQK VT +T +AE+VA+
Sbjct:  104 YSGCYYERDREAGRLTISQETYTKELGERHGVEWGGGIPLPTTWRLWDSDVNEP--SVEYP-FRALIGSLLWVALLTRPDIANAVRAVARYCSEPKLIHWRAALGILGYAVRTSSFGISFQRGTVSGFSLITFADADYASRAADRRSVSGGVVMCAGGAIAWFSKTQKCVTLSTTQAEYVAM 282          
BLAST of mRNA_A-nodosum_M_contig1054.1.1 vs. uniprot
Match: A0A6H5JR13_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR13_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 1.060e-28
Identity = 73/182 (40.11%), Postives = 105/182 (57.69%), Query Frame = 0
Query:    2 YTDCAFERDWHKEILEMNQMAFVKNMVEQYNISATSNIPKTSGVDLEPRKNGEPGGNEEFPKYRALVRSLMWLSVMTRPDIANALRACARHSHNPSPRHRKALLQVIAYVNVTKEIGLRFVRG--SGLRLSVYADAVCTAASNDRRSLSGVAVMLGDTAIGWKSSTQKYVTTATCEAEHVAL 181
            Y+ C +ERD     L ++Q  + K + E+Y +     IP  +   L      EP  + E+P +RAL+ SL+W++++TRPDIANA+RA AR+   P   H +A L ++ Y   T   G+ F RG  SG  L  +ADA   + + DRRS+SG  VM    AI W S TQK VT +T +AE+VA+
Sbjct:  408 YSGCYYERDREAGRLTISQETYTKELGERYGVEWGGGIPLPTTWRLWDSDVNEP--SVEYP-FRALIGSLLWVALLTRPDIANAVRAVARYCSEPKLIHWRAALGILGYAVRTSSFGISFQRGTVSGFSLITFADADYASRAADRRSVSGGVVMCAGGAIAWFSKTQKCVTLSTTQAEYVAM 586          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1054.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L175_9PHAE2.270e-3539.11Uncharacterized protein n=9 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JKS3_9PHAE7.580e-3538.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSU5_9PHAE3.010e-3237.99Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQD0_9PHAE6.080e-3238.46Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KGA6_9PHAE8.430e-3237.91Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KKK1_9PHAE5.770e-3138.46Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JRL9_9PHAE5.960e-3138.46Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5KN43_9PHAE1.150e-3038.46Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JWK8_9PHAE5.360e-2939.56Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JR13_9PHAE1.060e-2840.11Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1054contigA-nodosum_M_contig1054:32100..32642 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1054.1.1mRNA_A-nodosum_M_contig1054.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1054 32094..32642 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1054.1.1 ID=prot_A-nodosum_M_contig1054.1.1|Name=mRNA_A-nodosum_M_contig1054.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=181bp
MYTDCAFERDWHKEILEMNQMAFVKNMVEQYNISATSNIPKTSGVDLEPR
KNGEPGGNEEFPKYRALVRSLMWLSVMTRPDIANALRACARHSHNPSPRH
RKALLQVIAYVNVTKEIGLRFVRGSGLRLSVYADAVCTAASNDRRSLSGV
AVMLGDTAIGWKSSTQKYVTTATCEAEHVAL
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