prot_A-nodosum_M_contig1053.11.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1053.11.1
Unique Nameprot_A-nodosum_M_contig1053.11.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length232
Homology
BLAST of mRNA_A-nodosum_M_contig1053.11.1 vs. uniprot
Match: D8LKH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH2_ECTSI)

HSP 1 Score: 279 bits (714), Expect = 1.110e-88
Identity = 166/249 (66.67%), Postives = 187/249 (75.10%), Query Frame = 0
Query:    1 MSWSEATDDRDTLSELRTLPT-----RPPG----SSSRGRSSKMSASAMGGSKSERRLLMEAKATISAAIAEERRERLLAKRRARKCVSFLYYSFKVVGVVACVYTSGLNVALVYMCLNLKLQDRVIRCYLVLFGVGGVLAELDTPFAKANFRAMQKWWFKAPFYVFMAWLCLDARHSRGTVWFPLELASFVALQSMAAMSIVLNVCLRQVLERSGALGKRK--------QSRERRGGMTQATSRRGTG 232
            MSW+E  D  DTLSEL          RPP     +SS GRS+K    + G SKSERRLLMEAKA + AAIAE+R+ERL+AKRRAR+ V  LYY+ KVVGV ACVYTSGLN  LVYM  +  LQDR++R YLVLFGVGGVLAELDTPFAKANFRA+QKWWFKAPFYVFMAWLC DA  SRGTVWFPLELASFVALQ+M AM++VLNVCLR+VLERSGA GKR+          R RRG     +S RG+G
Sbjct:    1 MSWAEPAD-MDTLSELPRQSMVGSSGRPPKLSRTTSSVGRSAKSRGGSGGASKSERRLLMEAKAGVGAAIAEDRQERLIAKRRARRIVRVLYYAMKVVGVAACVYTSGLNATLVYMRPDFGLQDRLVRSYLVLFGVGGVLAELDTPFAKANFRALQKWWFKAPFYVFMAWLCFDASLSRGTVWFPLELASFVALQTMGAMAVVLNVCLREVLERSGAFGKRRGKKSASSSSRRLRRGASGINSSSRGSG 248          
BLAST of mRNA_A-nodosum_M_contig1053.11.1 vs. uniprot
Match: A0A6H5JH79_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH79_9PHAE)

HSP 1 Score: 217 bits (552), Expect = 4.160e-68
Identity = 113/154 (73.38%), Postives = 127/154 (82.47%), Query Frame = 0
Query:   64 ERRERLLAKRRARKCVSFLYYSFKVVGVVACVYTSGLNVALVYMCLN----LKLQDRVIRCYLVLFGVGGVLAELDTPFAKANFRAMQKWWFKAPFYVFMAWLCLDARHSRGTVWFPLELASFVALQSMAAMSIVLNVCLRQVLERSGALGKRK 213
            +R+ERL AKRRAR+ V  LYY+ KVVGV AC YTSGLN  LVYM  +    L     ++R YLVLFGVGGVLAELDTPFAKANFRA+QKWWFKAPFYVFMAWLC DA  SRGTVWF LELASFVALQ++  M++VLNVCLR+VLERSGALGKR+
Sbjct:    8 DRQERLAAKRRARRIVRVLYYAMKVVGVGACFYTSGLNATLVYMRPDFGRELLASSLLVRSYLVLFGVGGVLAELDTPFAKANFRALQKWWFKAPFYVFMAWLCFDASLSRGTVWFSLELASFVALQTVGVMALVLNVCLREVLERSGALGKRR 161          
BLAST of mRNA_A-nodosum_M_contig1053.11.1 vs. uniprot
Match: A0A835YSD9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSD9_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 8.590e-18
Identity = 60/155 (38.71%), Postives = 88/155 (56.77%), Query Frame = 0
Query:   57 ISAAIAEERRERLLAKRRARKCVSFLYYSFKVVGVVACVYTSGLNVALVYMCLNLKLQDRVIRCYLVLFGVGGVLAELDTPFAKANFRAMQKWWFKAPFYVFMA-----WLCLDARHSRGTVWFPLELASFVALQSMAAMSIVLNVCLRQVLERS 206
            +  A+ E  RE  +A+RRAR CV++ Y+  K   V   V     NV ++       L++R +R YL+ F +  +LAELDT FA+ NFRA+QKWW KA FYVF+      W  L A    G     L+LA+   L ++A  ++ L  CLR++LE++
Sbjct:   70 VRKAMEEVAREAAIARRRARACVTYSYWVLKSTAVATHVLMITTNVWVLARRHEPDLRERAVRGYLIPFSLAALLAELDTRFARDNFRALQKWWCKALFYVFLGTVNLGWTPLGAL---GRPLTRLQLATAGVLCALALGNVALYTCLRRLLEKT 221          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1053.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LKH2_ECTSI1.110e-8866.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JH79_9PHAE4.160e-6873.38Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835YSD9_9STRA8.590e-1838.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1053contigA-nodosum_M_contig1053:67649..81806 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1053.11.1mRNA_A-nodosum_M_contig1053.11.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1053 67649..81981 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1053.11.1 ID=prot_A-nodosum_M_contig1053.11.1|Name=mRNA_A-nodosum_M_contig1053.11.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=232bp
MSWSEATDDRDTLSELRTLPTRPPGSSSRGRSSKMSASAMGGSKSERRLL
MEAKATISAAIAEERRERLLAKRRARKCVSFLYYSFKVVGVVACVYTSGL
NVALVYMCLNLKLQDRVIRCYLVLFGVGGVLAELDTPFAKANFRAMQKWW
FKAPFYVFMAWLCLDARHSRGTVWFPLELASFVALQSMAAMSIVLNVCLR
QVLERSGALGKRKQSRERRGGMTQATSRRGTG
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